Experiment: m.b. perchlorate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1658 and B158DRAFT_1659 are separated by 291 nucleotides B158DRAFT_1659 and B158DRAFT_1660 are separated by 12 nucleotides B158DRAFT_1660 and B158DRAFT_1662 are separated by 957 nucleotides
B158DRAFT_1658: B158DRAFT_1658 - hypothetical protein, at 1,728,620 to 1,730,056
_1658
B158DRAFT_1659: B158DRAFT_1659 - Cytochrome c5, at 1,730,348 to 1,730,950
_1659
B158DRAFT_1660: B158DRAFT_1660 - hypothetical protein, at 1,730,963 to 1,732,213
_1660
B158DRAFT_1662: B158DRAFT_1662 - heavy metal sensor kinase, at 1,733,171 to 1,734,607
_1662
Position (kb)
1730
1731
1732
1733 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1730.020 kb on - strand at 1730.065 kb on - strand at 1730.065 kb on - strand at 1730.079 kb on + strand at 1730.079 kb on + strand at 1730.087 kb on - strand at 1730.087 kb on - strand at 1730.087 kb on - strand at 1730.176 kb on - strand at 1730.393 kb on - strand at 1730.454 kb on - strand, within B158DRAFT_1659 at 1730.535 kb on + strand, within B158DRAFT_1659 at 1730.535 kb on + strand, within B158DRAFT_1659 at 1730.535 kb on + strand, within B158DRAFT_1659 at 1730.535 kb on + strand, within B158DRAFT_1659 at 1730.543 kb on - strand, within B158DRAFT_1659 at 1730.543 kb on - strand, within B158DRAFT_1659 at 1730.543 kb on - strand, within B158DRAFT_1659 at 1730.543 kb on - strand, within B158DRAFT_1659 at 1730.550 kb on + strand, within B158DRAFT_1659 at 1730.550 kb on + strand, within B158DRAFT_1659 at 1730.634 kb on + strand, within B158DRAFT_1659 at 1730.705 kb on + strand, within B158DRAFT_1659 at 1730.839 kb on - strand, within B158DRAFT_1659 at 1730.887 kb on - strand, within B158DRAFT_1659 at 1730.962 kb on + strand at 1730.996 kb on + strand at 1731.181 kb on - strand, within B158DRAFT_1660 at 1731.203 kb on + strand, within B158DRAFT_1660 at 1731.229 kb on + strand, within B158DRAFT_1660 at 1731.259 kb on + strand, within B158DRAFT_1660 at 1731.259 kb on + strand, within B158DRAFT_1660 at 1731.267 kb on - strand, within B158DRAFT_1660 at 1731.267 kb on - strand, within B158DRAFT_1660 at 1731.267 kb on - strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.285 kb on + strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.293 kb on - strand, within B158DRAFT_1660 at 1731.306 kb on + strand, within B158DRAFT_1660 at 1731.337 kb on - strand, within B158DRAFT_1660 at 1731.395 kb on - strand, within B158DRAFT_1660 at 1731.455 kb on + strand, within B158DRAFT_1660 at 1731.458 kb on - strand, within B158DRAFT_1660 at 1731.609 kb on - strand, within B158DRAFT_1660 at 1731.609 kb on - strand, within B158DRAFT_1660 at 1731.609 kb on - strand, within B158DRAFT_1660 at 1731.659 kb on + strand, within B158DRAFT_1660 at 1731.689 kb on + strand, within B158DRAFT_1660 at 1731.717 kb on + strand, within B158DRAFT_1660 at 1731.850 kb on + strand, within B158DRAFT_1660 at 1731.850 kb on + strand, within B158DRAFT_1660 at 1731.858 kb on - strand, within B158DRAFT_1660 at 1731.889 kb on + strand, within B158DRAFT_1660 at 1731.890 kb on - strand, within B158DRAFT_1660 at 1732.018 kb on - strand, within B158DRAFT_1660 at 1732.102 kb on - strand at 1732.104 kb on + strand at 1732.109 kb on + strand at 1732.112 kb on - strand at 1732.112 kb on - strand at 1732.208 kb on + strand at 1732.208 kb on + strand at 1732.208 kb on + strand at 1732.216 kb on + strand at 1732.253 kb on + strand at 1732.264 kb on + strand at 1732.264 kb on + strand at 1732.264 kb on + strand at 1732.264 kb on + strand at 1732.308 kb on - strand at 1732.308 kb on - strand at 1732.375 kb on - strand at 1732.483 kb on - strand at 1732.483 kb on - strand at 1732.500 kb on + strand at 1732.500 kb on + strand at 1732.508 kb on - strand at 1732.515 kb on + strand at 1732.515 kb on + strand at 1732.515 kb on + strand at 1732.515 kb on + strand at 1732.521 kb on - strand at 1732.521 kb on - strand at 1732.523 kb on - strand at 1732.678 kb on + strand at 1732.681 kb on - strand at 1732.681 kb on - strand at 1732.746 kb on + strand at 1732.755 kb on + strand at 1732.763 kb on - strand at 1732.771 kb on - strand at 1732.778 kb on + strand at 1732.791 kb on - strand at 1732.824 kb on + strand at 1732.826 kb on + strand at 1732.839 kb on - strand at 1732.843 kb on + strand at 1732.843 kb on + strand at 1732.843 kb on + strand at 1732.843 kb on + strand at 1732.843 kb on + strand at 1732.851 kb on - strand at 1732.851 kb on - strand at 1732.851 kb on - strand at 1732.851 kb on - strand at 1732.857 kb on + strand at 1732.859 kb on - strand at 1732.865 kb on - strand at 1732.892 kb on + strand at 1732.923 kb on + strand at 1732.961 kb on + strand at 1732.969 kb on - strand at 1733.012 kb on + strand at 1733.082 kb on + strand at 1733.198 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 200 mM remove 1,730,020 - -0.3 1,730,065 - -0.2 1,730,065 - -0.3 1,730,079 + -0.0 1,730,079 + +0.5 1,730,087 - -0.9 1,730,087 - -0.2 1,730,087 - -0.6 1,730,176 - +0.6 1,730,393 - -0.5 1,730,454 - B158DRAFT_1659 0.18 -0.9 1,730,535 + B158DRAFT_1659 0.31 -1.3 1,730,535 + B158DRAFT_1659 0.31 -0.5 1,730,535 + B158DRAFT_1659 0.31 -0.3 1,730,535 + B158DRAFT_1659 0.31 +0.2 1,730,543 - B158DRAFT_1659 0.32 +0.2 1,730,543 - B158DRAFT_1659 0.32 +0.0 1,730,543 - B158DRAFT_1659 0.32 -0.2 1,730,543 - B158DRAFT_1659 0.32 -0.7 1,730,550 + B158DRAFT_1659 0.33 -0.3 1,730,550 + B158DRAFT_1659 0.33 -0.1 1,730,634 + B158DRAFT_1659 0.47 -0.3 1,730,705 + B158DRAFT_1659 0.59 -0.5 1,730,839 - B158DRAFT_1659 0.81 -0.6 1,730,887 - B158DRAFT_1659 0.89 +0.3 1,730,962 + +0.2 1,730,996 + +0.4 1,731,181 - B158DRAFT_1660 0.17 -0.4 1,731,203 + B158DRAFT_1660 0.19 -0.3 1,731,229 + B158DRAFT_1660 0.21 -3.2 1,731,259 + B158DRAFT_1660 0.24 -0.8 1,731,259 + B158DRAFT_1660 0.24 +0.1 1,731,267 - B158DRAFT_1660 0.24 -0.1 1,731,267 - B158DRAFT_1660 0.24 +0.5 1,731,267 - B158DRAFT_1660 0.24 -0.6 1,731,285 + B158DRAFT_1660 0.26 +0.5 1,731,285 + B158DRAFT_1660 0.26 +0.2 1,731,285 + B158DRAFT_1660 0.26 -0.2 1,731,285 + B158DRAFT_1660 0.26 -0.6 1,731,285 + B158DRAFT_1660 0.26 -0.2 1,731,285 + B158DRAFT_1660 0.26 +0.2 1,731,285 + B158DRAFT_1660 0.26 -0.8 1,731,285 + B158DRAFT_1660 0.26 -1.8 1,731,293 - B158DRAFT_1660 0.26 +0.2 1,731,293 - B158DRAFT_1660 0.26 -0.7 1,731,293 - B158DRAFT_1660 0.26 -0.2 1,731,293 - B158DRAFT_1660 0.26 +0.7 1,731,293 - B158DRAFT_1660 0.26 -0.1 1,731,293 - B158DRAFT_1660 0.26 +0.2 1,731,293 - B158DRAFT_1660 0.26 -0.3 1,731,293 - B158DRAFT_1660 0.26 +0.4 1,731,293 - B158DRAFT_1660 0.26 -0.3 1,731,293 - B158DRAFT_1660 0.26 -0.2 1,731,293 - B158DRAFT_1660 0.26 -1.4 1,731,293 - B158DRAFT_1660 0.26 +0.1 1,731,293 - B158DRAFT_1660 0.26 +0.8 1,731,306 + B158DRAFT_1660 0.27 -0.1 1,731,337 - B158DRAFT_1660 0.30 -0.3 1,731,395 - B158DRAFT_1660 0.35 -0.7 1,731,455 + B158DRAFT_1660 0.39 -1.0 1,731,458 - B158DRAFT_1660 0.40 +0.3 1,731,609 - B158DRAFT_1660 0.52 -1.7 1,731,609 - B158DRAFT_1660 0.52 -0.2 1,731,609 - B158DRAFT_1660 0.52 -0.2 1,731,659 + B158DRAFT_1660 0.56 +0.2 1,731,689 + B158DRAFT_1660 0.58 +0.2 1,731,717 + B158DRAFT_1660 0.60 -3.1 1,731,850 + B158DRAFT_1660 0.71 -0.1 1,731,850 + B158DRAFT_1660 0.71 -0.6 1,731,858 - B158DRAFT_1660 0.72 +0.4 1,731,889 + B158DRAFT_1660 0.74 +0.3 1,731,890 - B158DRAFT_1660 0.74 -1.6 1,732,018 - B158DRAFT_1660 0.84 +0.4 1,732,102 - -1.0 1,732,104 + +0.8 1,732,109 + +0.5 1,732,112 - +0.0 1,732,112 - -0.1 1,732,208 + -0.0 1,732,208 + -1.4 1,732,208 + -0.5 1,732,216 + +0.1 1,732,253 + +1.2 1,732,264 + +0.3 1,732,264 + +0.0 1,732,264 + +0.1 1,732,264 + +0.3 1,732,308 - +0.8 1,732,308 - -0.4 1,732,375 - -0.6 1,732,483 - +0.0 1,732,483 - -0.2 1,732,500 + -2.4 1,732,500 + +0.2 1,732,508 - -0.8 1,732,515 + +0.3 1,732,515 + +0.1 1,732,515 + -0.1 1,732,515 + +0.4 1,732,521 - +0.3 1,732,521 - -0.1 1,732,523 - +0.3 1,732,678 + +0.1 1,732,681 - +0.1 1,732,681 - +1.1 1,732,746 + -0.2 1,732,755 + -0.7 1,732,763 - -0.0 1,732,771 - -0.2 1,732,778 + +0.3 1,732,791 - -0.6 1,732,824 + -0.1 1,732,826 + +1.2 1,732,839 - -0.3 1,732,843 + -0.5 1,732,843 + -1.0 1,732,843 + +0.0 1,732,843 + +1.8 1,732,843 + -0.1 1,732,851 - +0.1 1,732,851 - +0.0 1,732,851 - -4.1 1,732,851 - -0.2 1,732,857 + +0.0 1,732,859 - -0.0 1,732,865 - -0.0 1,732,892 + -1.3 1,732,923 + -0.2 1,732,961 + -0.8 1,732,969 - +0.4 1,733,012 + +0.2 1,733,082 + -0.7 1,733,198 - -0.9
Or see this region's nucleotide sequence