Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0170

Experiment: m.b. perchlorate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0168 and B158DRAFT_0169 are separated by 63 nucleotidesB158DRAFT_0169 and B158DRAFT_0170 are separated by 11 nucleotidesB158DRAFT_0170 and B158DRAFT_0171 are separated by 25 nucleotidesB158DRAFT_0171 and B158DRAFT_0172 are separated by 19 nucleotides B158DRAFT_0168: B158DRAFT_0168 - Dicarboxylate transport., at 165,560 to 168,199 _0168 B158DRAFT_0169: B158DRAFT_0169 - hypothetical protein, at 168,263 to 168,457 _0169 B158DRAFT_0170: B158DRAFT_0170 - Uncharacterized protein conserved in bacteria, at 168,469 to 168,801 _0170 B158DRAFT_0171: B158DRAFT_0171 - Glutathione S-transferase, at 168,827 to 169,423 _0171 B158DRAFT_0172: B158DRAFT_0172 - ATPases of the AAA+ class, at 169,443 to 170,942 _0172 Position (kb) 168 169Strain fitness (log2 ratio) -2 -1 0 1 2 3at 167.507 kb on + strand, within B158DRAFT_0168at 167.518 kb on + strand, within B158DRAFT_0168at 167.531 kb on - strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.626 kb on + strand, within B158DRAFT_0168at 167.634 kb on - strand, within B158DRAFT_0168at 167.688 kb on + strand, within B158DRAFT_0168at 167.727 kb on - strand, within B158DRAFT_0168at 167.745 kb on + strand, within B158DRAFT_0168at 167.796 kb on + strand, within B158DRAFT_0168at 168.029 kb on + strandat 168.029 kb on - strandat 168.238 kb on + strandat 168.284 kb on + strand, within B158DRAFT_0169at 168.307 kb on + strand, within B158DRAFT_0169at 168.330 kb on - strand, within B158DRAFT_0169at 168.421 kb on + strand, within B158DRAFT_0169at 168.454 kb on - strandat 168.531 kb on - strand, within B158DRAFT_0170at 168.535 kb on + strand, within B158DRAFT_0170at 168.545 kb on + strand, within B158DRAFT_0170at 168.553 kb on - strand, within B158DRAFT_0170at 168.561 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.573 kb on - strand, within B158DRAFT_0170at 168.640 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.743 kb on - strand, within B158DRAFT_0170at 168.839 kb on - strandat 168.934 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.975 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.113 kb on + strand, within B158DRAFT_0171at 169.114 kb on - strand, within B158DRAFT_0171at 169.141 kb on + strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.440 kb on - strandat 169.508 kb on - strandat 169.548 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.587 kb on + strandat 169.587 kb on + strandat 169.587 kb on + strandat 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.624 kb on + strand, within B158DRAFT_0172at 169.624 kb on + strand, within B158DRAFT_0172at 169.625 kb on + strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.634 kb on - strand, within B158DRAFT_0172at 169.634 kb on - strand, within B158DRAFT_0172at 169.650 kb on - strand, within B158DRAFT_0172at 169.650 kb on - strand, within B158DRAFT_0172at 169.713 kb on + strand, within B158DRAFT_0172

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 200 mM
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167,507 + B158DRAFT_0168 0.74 -0.4
167,518 + B158DRAFT_0168 0.74 -0.9
167,531 - B158DRAFT_0168 0.75 -1.4
167,586 + B158DRAFT_0168 0.77 -0.4
167,586 + B158DRAFT_0168 0.77 -0.7
167,586 + B158DRAFT_0168 0.77 -0.7
167,586 + B158DRAFT_0168 0.77 -0.6
167,594 - B158DRAFT_0168 0.77 +2.8
167,594 - B158DRAFT_0168 0.77 +0.5
167,594 - B158DRAFT_0168 0.77 -0.6
167,594 - B158DRAFT_0168 0.77 -1.2
167,594 - B158DRAFT_0168 0.77 -1.8
167,594 - B158DRAFT_0168 0.77 -1.8
167,626 + B158DRAFT_0168 0.78 -0.9
167,634 - B158DRAFT_0168 0.79 -2.3
167,688 + B158DRAFT_0168 0.81 -0.8
167,727 - B158DRAFT_0168 0.82 +0.1
167,745 + B158DRAFT_0168 0.83 +0.6
167,796 + B158DRAFT_0168 0.85 -0.5
168,029 + -0.2
168,029 - -1.1
168,238 + -1.1
168,284 + B158DRAFT_0169 0.11 -1.5
168,307 + B158DRAFT_0169 0.23 -1.5
168,330 - B158DRAFT_0169 0.34 -1.2
168,421 + B158DRAFT_0169 0.81 +0.0
168,454 - -0.4
168,531 - B158DRAFT_0170 0.19 -0.2
168,535 + B158DRAFT_0170 0.20 -0.6
168,545 + B158DRAFT_0170 0.23 -0.1
168,553 - B158DRAFT_0170 0.25 -0.2
168,561 - B158DRAFT_0170 0.28 -0.2
168,567 - B158DRAFT_0170 0.29 -1.8
168,567 - B158DRAFT_0170 0.29 -0.2
168,573 - B158DRAFT_0170 0.31 +0.2
168,640 + B158DRAFT_0170 0.51 -0.2
168,735 + B158DRAFT_0170 0.80 +0.0
168,735 + B158DRAFT_0170 0.80 -0.5
168,743 - B158DRAFT_0170 0.82 +0.2
168,839 - -0.3
168,934 + B158DRAFT_0171 0.18 +0.6
168,944 + B158DRAFT_0171 0.20 +0.6
168,944 + B158DRAFT_0171 0.20 -1.8
168,944 + B158DRAFT_0171 0.20 -0.4
168,944 + B158DRAFT_0171 0.20 -0.3
168,944 + B158DRAFT_0171 0.20 -0.6
168,944 + B158DRAFT_0171 0.20 -0.3
168,952 - B158DRAFT_0171 0.21 -0.7
168,952 - B158DRAFT_0171 0.21 +0.2
168,952 - B158DRAFT_0171 0.21 -0.2
168,952 - B158DRAFT_0171 0.21 -0.7
168,952 - B158DRAFT_0171 0.21 +1.6
168,975 + B158DRAFT_0171 0.25 -0.3
168,997 + B158DRAFT_0171 0.28 -0.8
168,997 + B158DRAFT_0171 0.28 -0.4
168,997 + B158DRAFT_0171 0.28 -0.0
168,997 + B158DRAFT_0171 0.28 -1.1
169,005 - B158DRAFT_0171 0.30 -0.9
169,005 - B158DRAFT_0171 0.30 -0.6
169,083 - B158DRAFT_0171 0.43 +0.3
169,083 - B158DRAFT_0171 0.43 -1.1
169,083 - B158DRAFT_0171 0.43 -0.4
169,113 + B158DRAFT_0171 0.48 -0.6
169,114 - B158DRAFT_0171 0.48 +0.6
169,141 + B158DRAFT_0171 0.53 -0.5
169,280 - B158DRAFT_0171 0.76 -1.1
169,280 - B158DRAFT_0171 0.76 -0.7
169,440 - -0.2
169,508 - +0.0
169,548 + -0.0
169,585 + -0.6
169,585 + +0.6
169,585 + -0.4
169,585 + +0.6
169,585 + -1.1
169,585 + -0.4
169,585 + +0.2
169,585 + +0.1
169,585 + -0.5
169,585 + +0.0
169,587 + -0.2
169,587 + +0.7
169,587 + +0.4
169,593 - B158DRAFT_0172 0.10 -0.7
169,593 - B158DRAFT_0172 0.10 -1.5
169,593 - B158DRAFT_0172 0.10 -0.3
169,593 - B158DRAFT_0172 0.10 +0.1
169,593 - B158DRAFT_0172 0.10 -1.4
169,593 - B158DRAFT_0172 0.10 -0.2
169,593 - B158DRAFT_0172 0.10 -0.2
169,593 - B158DRAFT_0172 0.10 -0.1
169,593 - B158DRAFT_0172 0.10 +1.0
169,593 - B158DRAFT_0172 0.10 +0.2
169,593 - B158DRAFT_0172 0.10 +0.0
169,593 - B158DRAFT_0172 0.10 +0.2
169,624 + B158DRAFT_0172 0.12 -0.5
169,624 + B158DRAFT_0172 0.12 +0.3
169,625 + B158DRAFT_0172 0.12 -0.6
169,632 - B158DRAFT_0172 0.13 -0.0
169,632 - B158DRAFT_0172 0.13 -0.1
169,632 - B158DRAFT_0172 0.13 -0.2
169,632 - B158DRAFT_0172 0.13 -0.9
169,634 - B158DRAFT_0172 0.13 +0.2
169,634 - B158DRAFT_0172 0.13 +0.0
169,650 - B158DRAFT_0172 0.14 +0.3
169,650 - B158DRAFT_0172 0.14 -0.6
169,713 + B158DRAFT_0172 0.18 -2.4

Or see this region's nucleotide sequence