Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1594

Experiment: m.b. Chlorite 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1592 and B158DRAFT_1593 are separated by 69 nucleotidesB158DRAFT_1593 and B158DRAFT_1594 are separated by 232 nucleotidesB158DRAFT_1594 and B158DRAFT_1595 are separated by 158 nucleotides B158DRAFT_1592: B158DRAFT_1592 - hypothetical protein, at 1,654,548 to 1,655,108 _1592 B158DRAFT_1593: B158DRAFT_1593 - hypothetical protein, at 1,655,178 to 1,655,423 _1593 B158DRAFT_1594: B158DRAFT_1594 - hypothetical protein, at 1,655,656 to 1,655,871 _1594 B158DRAFT_1595: B158DRAFT_1595 - hypothetical protein, at 1,656,030 to 1,656,563 _1595 Position (kb) 1655 1656Strain fitness (log2 ratio) -2 -1 0 1at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.789 kb on - strand, within B158DRAFT_1592at 1654.832 kb on - strand, within B158DRAFT_1592at 1655.008 kb on - strand, within B158DRAFT_1592at 1655.151 kb on + strandat 1655.159 kb on - strandat 1655.163 kb on + strandat 1655.164 kb on - strandat 1655.168 kb on + strandat 1655.173 kb on + strandat 1655.258 kb on + strand, within B158DRAFT_1593at 1655.286 kb on + strand, within B158DRAFT_1593at 1655.333 kb on + strand, within B158DRAFT_1593at 1655.347 kb on + strand, within B158DRAFT_1593at 1655.350 kb on - strand, within B158DRAFT_1593at 1655.355 kb on - strand, within B158DRAFT_1593at 1655.355 kb on - strand, within B158DRAFT_1593at 1655.355 kb on - strand, within B158DRAFT_1593at 1655.378 kb on + strand, within B158DRAFT_1593at 1655.388 kb on + strand, within B158DRAFT_1593at 1655.389 kb on + strand, within B158DRAFT_1593at 1655.389 kb on + strand, within B158DRAFT_1593at 1655.396 kb on - strand, within B158DRAFT_1593at 1655.397 kb on - strand, within B158DRAFT_1593at 1655.477 kb on - strandat 1655.531 kb on + strandat 1655.548 kb on + strandat 1655.556 kb on - strandat 1655.606 kb on + strandat 1655.614 kb on - strandat 1655.762 kb on - strand, within B158DRAFT_1594at 1655.780 kb on + strand, within B158DRAFT_1594at 1655.790 kb on + strand, within B158DRAFT_1594at 1655.803 kb on - strand, within B158DRAFT_1594at 1655.859 kb on - strandat 1655.859 kb on - strandat 1656.032 kb on + strandat 1656.160 kb on + strand, within B158DRAFT_1595at 1656.291 kb on + strand, within B158DRAFT_1595at 1656.310 kb on - strand, within B158DRAFT_1595at 1656.384 kb on - strand, within B158DRAFT_1595at 1656.397 kb on + strand, within B158DRAFT_1595at 1656.437 kb on + strand, within B158DRAFT_1595at 1656.443 kb on - strand, within B158DRAFT_1595at 1656.443 kb on - strand, within B158DRAFT_1595at 1656.445 kb on + strand, within B158DRAFT_1595at 1656.445 kb on - strand, within B158DRAFT_1595at 1656.445 kb on - strand, within B158DRAFT_1595at 1656.445 kb on - strand, within B158DRAFT_1595at 1656.453 kb on - strand, within B158DRAFT_1595at 1656.453 kb on - strand, within B158DRAFT_1595at 1656.496 kb on - strand, within B158DRAFT_1595at 1656.502 kb on - strand, within B158DRAFT_1595at 1656.700 kb on - strandat 1656.707 kb on + strandat 1656.707 kb on + strandat 1656.718 kb on + strandat 1656.721 kb on - strandat 1656.721 kb on - strandat 1656.794 kb on + strandat 1656.794 kb on + strandat 1656.819 kb on + strandat 1656.827 kb on - strandat 1656.828 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM
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1,654,680 + B158DRAFT_1592 0.24 +0.3
1,654,680 + B158DRAFT_1592 0.24 -0.2
1,654,680 + B158DRAFT_1592 0.24 -1.0
1,654,680 + B158DRAFT_1592 0.24 +0.6
1,654,688 - B158DRAFT_1592 0.25 +0.1
1,654,688 - B158DRAFT_1592 0.25 +0.4
1,654,688 - B158DRAFT_1592 0.25 +1.0
1,654,688 - B158DRAFT_1592 0.25 -1.2
1,654,789 - B158DRAFT_1592 0.43 +0.5
1,654,832 - B158DRAFT_1592 0.51 +0.5
1,655,008 - B158DRAFT_1592 0.82 -0.6
1,655,151 + +0.1
1,655,159 - -0.4
1,655,163 + +0.3
1,655,164 - -0.0
1,655,168 + -0.7
1,655,173 + -1.4
1,655,258 + B158DRAFT_1593 0.33 -2.3
1,655,286 + B158DRAFT_1593 0.44 +0.5
1,655,333 + B158DRAFT_1593 0.63 -0.6
1,655,347 + B158DRAFT_1593 0.69 +0.5
1,655,350 - B158DRAFT_1593 0.70 -2.1
1,655,355 - B158DRAFT_1593 0.72 -0.1
1,655,355 - B158DRAFT_1593 0.72 +1.6
1,655,355 - B158DRAFT_1593 0.72 -0.8
1,655,378 + B158DRAFT_1593 0.81 +1.1
1,655,388 + B158DRAFT_1593 0.85 -0.9
1,655,389 + B158DRAFT_1593 0.86 -0.8
1,655,389 + B158DRAFT_1593 0.86 -1.4
1,655,396 - B158DRAFT_1593 0.89 +1.3
1,655,397 - B158DRAFT_1593 0.89 -1.9
1,655,477 - -1.4
1,655,531 + -0.1
1,655,548 + -0.5
1,655,556 - -0.8
1,655,606 + -0.7
1,655,614 - +0.1
1,655,762 - B158DRAFT_1594 0.49 +0.3
1,655,780 + B158DRAFT_1594 0.57 -1.6
1,655,790 + B158DRAFT_1594 0.62 +0.3
1,655,803 - B158DRAFT_1594 0.68 +0.2
1,655,859 - -0.3
1,655,859 - +0.8
1,656,032 + +0.7
1,656,160 + B158DRAFT_1595 0.24 +0.1
1,656,291 + B158DRAFT_1595 0.49 +0.0
1,656,310 - B158DRAFT_1595 0.52 -0.8
1,656,384 - B158DRAFT_1595 0.66 +0.6
1,656,397 + B158DRAFT_1595 0.69 +0.3
1,656,437 + B158DRAFT_1595 0.76 -0.4
1,656,443 - B158DRAFT_1595 0.77 -0.6
1,656,443 - B158DRAFT_1595 0.77 -0.7
1,656,445 + B158DRAFT_1595 0.78 -0.5
1,656,445 - B158DRAFT_1595 0.78 -0.9
1,656,445 - B158DRAFT_1595 0.78 -1.4
1,656,445 - B158DRAFT_1595 0.78 -0.8
1,656,453 - B158DRAFT_1595 0.79 -0.8
1,656,453 - B158DRAFT_1595 0.79 -0.1
1,656,496 - B158DRAFT_1595 0.87 +0.0
1,656,502 - B158DRAFT_1595 0.88 -0.5
1,656,700 - -1.9
1,656,707 + -0.7
1,656,707 + -0.1
1,656,718 + -0.8
1,656,721 - -0.1
1,656,721 - -0.4
1,656,794 + -0.1
1,656,794 + -2.3
1,656,819 + -1.0
1,656,827 - -1.8
1,656,828 - -1.1

Or see this region's nucleotide sequence