Experiment: m.b. Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1592 and B158DRAFT_1593 are separated by 69 nucleotides B158DRAFT_1593 and B158DRAFT_1594 are separated by 232 nucleotides B158DRAFT_1594 and B158DRAFT_1595 are separated by 158 nucleotides
B158DRAFT_1592: B158DRAFT_1592 - hypothetical protein, at 1,654,548 to 1,655,108
_1592
B158DRAFT_1593: B158DRAFT_1593 - hypothetical protein, at 1,655,178 to 1,655,423
_1593
B158DRAFT_1594: B158DRAFT_1594 - hypothetical protein, at 1,655,656 to 1,655,871
_1594
B158DRAFT_1595: B158DRAFT_1595 - hypothetical protein, at 1,656,030 to 1,656,563
_1595
Position (kb)
1655
1656 Strain fitness (log2 ratio)
-2
-1
0
1 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.789 kb on - strand, within B158DRAFT_1592 at 1654.832 kb on - strand, within B158DRAFT_1592 at 1655.008 kb on - strand, within B158DRAFT_1592 at 1655.151 kb on + strand at 1655.159 kb on - strand at 1655.163 kb on + strand at 1655.164 kb on - strand at 1655.168 kb on + strand at 1655.173 kb on + strand at 1655.258 kb on + strand, within B158DRAFT_1593 at 1655.286 kb on + strand, within B158DRAFT_1593 at 1655.333 kb on + strand, within B158DRAFT_1593 at 1655.347 kb on + strand, within B158DRAFT_1593 at 1655.350 kb on - strand, within B158DRAFT_1593 at 1655.355 kb on - strand, within B158DRAFT_1593 at 1655.355 kb on - strand, within B158DRAFT_1593 at 1655.355 kb on - strand, within B158DRAFT_1593 at 1655.378 kb on + strand, within B158DRAFT_1593 at 1655.388 kb on + strand, within B158DRAFT_1593 at 1655.389 kb on + strand, within B158DRAFT_1593 at 1655.389 kb on + strand, within B158DRAFT_1593 at 1655.396 kb on - strand, within B158DRAFT_1593 at 1655.397 kb on - strand, within B158DRAFT_1593 at 1655.477 kb on - strand at 1655.531 kb on + strand at 1655.548 kb on + strand at 1655.556 kb on - strand at 1655.606 kb on + strand at 1655.614 kb on - strand at 1655.762 kb on - strand, within B158DRAFT_1594 at 1655.780 kb on + strand, within B158DRAFT_1594 at 1655.790 kb on + strand, within B158DRAFT_1594 at 1655.803 kb on - strand, within B158DRAFT_1594 at 1655.859 kb on - strand at 1655.859 kb on - strand at 1656.032 kb on + strand at 1656.160 kb on + strand, within B158DRAFT_1595 at 1656.291 kb on + strand, within B158DRAFT_1595 at 1656.310 kb on - strand, within B158DRAFT_1595 at 1656.384 kb on - strand, within B158DRAFT_1595 at 1656.397 kb on + strand, within B158DRAFT_1595 at 1656.437 kb on + strand, within B158DRAFT_1595 at 1656.443 kb on - strand, within B158DRAFT_1595 at 1656.443 kb on - strand, within B158DRAFT_1595 at 1656.445 kb on + strand, within B158DRAFT_1595 at 1656.445 kb on - strand, within B158DRAFT_1595 at 1656.445 kb on - strand, within B158DRAFT_1595 at 1656.445 kb on - strand, within B158DRAFT_1595 at 1656.453 kb on - strand, within B158DRAFT_1595 at 1656.453 kb on - strand, within B158DRAFT_1595 at 1656.496 kb on - strand, within B158DRAFT_1595 at 1656.502 kb on - strand, within B158DRAFT_1595 at 1656.700 kb on - strand at 1656.707 kb on + strand at 1656.707 kb on + strand at 1656.718 kb on + strand at 1656.721 kb on - strand at 1656.721 kb on - strand at 1656.794 kb on + strand at 1656.794 kb on + strand at 1656.819 kb on + strand at 1656.827 kb on - strand at 1656.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM remove 1,654,680 + B158DRAFT_1592 0.24 +0.3 1,654,680 + B158DRAFT_1592 0.24 -0.2 1,654,680 + B158DRAFT_1592 0.24 -1.0 1,654,680 + B158DRAFT_1592 0.24 +0.6 1,654,688 - B158DRAFT_1592 0.25 +0.1 1,654,688 - B158DRAFT_1592 0.25 +0.4 1,654,688 - B158DRAFT_1592 0.25 +1.0 1,654,688 - B158DRAFT_1592 0.25 -1.2 1,654,789 - B158DRAFT_1592 0.43 +0.5 1,654,832 - B158DRAFT_1592 0.51 +0.5 1,655,008 - B158DRAFT_1592 0.82 -0.6 1,655,151 + +0.1 1,655,159 - -0.4 1,655,163 + +0.3 1,655,164 - -0.0 1,655,168 + -0.7 1,655,173 + -1.4 1,655,258 + B158DRAFT_1593 0.33 -2.3 1,655,286 + B158DRAFT_1593 0.44 +0.5 1,655,333 + B158DRAFT_1593 0.63 -0.6 1,655,347 + B158DRAFT_1593 0.69 +0.5 1,655,350 - B158DRAFT_1593 0.70 -2.1 1,655,355 - B158DRAFT_1593 0.72 -0.1 1,655,355 - B158DRAFT_1593 0.72 +1.6 1,655,355 - B158DRAFT_1593 0.72 -0.8 1,655,378 + B158DRAFT_1593 0.81 +1.1 1,655,388 + B158DRAFT_1593 0.85 -0.9 1,655,389 + B158DRAFT_1593 0.86 -0.8 1,655,389 + B158DRAFT_1593 0.86 -1.4 1,655,396 - B158DRAFT_1593 0.89 +1.3 1,655,397 - B158DRAFT_1593 0.89 -1.9 1,655,477 - -1.4 1,655,531 + -0.1 1,655,548 + -0.5 1,655,556 - -0.8 1,655,606 + -0.7 1,655,614 - +0.1 1,655,762 - B158DRAFT_1594 0.49 +0.3 1,655,780 + B158DRAFT_1594 0.57 -1.6 1,655,790 + B158DRAFT_1594 0.62 +0.3 1,655,803 - B158DRAFT_1594 0.68 +0.2 1,655,859 - -0.3 1,655,859 - +0.8 1,656,032 + +0.7 1,656,160 + B158DRAFT_1595 0.24 +0.1 1,656,291 + B158DRAFT_1595 0.49 +0.0 1,656,310 - B158DRAFT_1595 0.52 -0.8 1,656,384 - B158DRAFT_1595 0.66 +0.6 1,656,397 + B158DRAFT_1595 0.69 +0.3 1,656,437 + B158DRAFT_1595 0.76 -0.4 1,656,443 - B158DRAFT_1595 0.77 -0.6 1,656,443 - B158DRAFT_1595 0.77 -0.7 1,656,445 + B158DRAFT_1595 0.78 -0.5 1,656,445 - B158DRAFT_1595 0.78 -0.9 1,656,445 - B158DRAFT_1595 0.78 -1.4 1,656,445 - B158DRAFT_1595 0.78 -0.8 1,656,453 - B158DRAFT_1595 0.79 -0.8 1,656,453 - B158DRAFT_1595 0.79 -0.1 1,656,496 - B158DRAFT_1595 0.87 +0.0 1,656,502 - B158DRAFT_1595 0.88 -0.5 1,656,700 - -1.9 1,656,707 + -0.7 1,656,707 + -0.1 1,656,718 + -0.8 1,656,721 - -0.1 1,656,721 - -0.4 1,656,794 + -0.1 1,656,794 + -2.3 1,656,819 + -1.0 1,656,827 - -1.8 1,656,828 - -1.1
Or see this region's nucleotide sequence