Experiment: m.b. Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1444 and B158DRAFT_1445 are separated by 371 nucleotides B158DRAFT_1445 and B158DRAFT_1446 are separated by 381 nucleotides
B158DRAFT_1444: B158DRAFT_1444 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 1,496,488 to 1,498,425
_1444
B158DRAFT_1445: B158DRAFT_1445 - Phenylalanine 4-hydroxylase (EC 1.14.16.1), at 1,498,797 to 1,499,600
_1445
B158DRAFT_1446: B158DRAFT_1446 - 4-hydroxyphenylpyruvate dioxygenase, at 1,499,982 to 1,501,043
_1446
Position (kb)
1498
1499
1500 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1497.799 kb on - strand, within B158DRAFT_1444 at 1497.804 kb on - strand, within B158DRAFT_1444 at 1497.964 kb on + strand, within B158DRAFT_1444 at 1497.984 kb on + strand, within B158DRAFT_1444 at 1498.012 kb on - strand, within B158DRAFT_1444 at 1498.042 kb on + strand, within B158DRAFT_1444 at 1498.136 kb on + strand, within B158DRAFT_1444 at 1498.149 kb on - strand, within B158DRAFT_1444 at 1498.201 kb on + strand, within B158DRAFT_1444 at 1498.232 kb on + strand at 1498.240 kb on - strand at 1498.299 kb on + strand at 1498.307 kb on - strand at 1498.333 kb on + strand at 1498.341 kb on - strand at 1498.343 kb on + strand at 1498.343 kb on + strand at 1498.351 kb on - strand at 1498.351 kb on - strand at 1498.352 kb on + strand at 1498.352 kb on + strand at 1498.357 kb on + strand at 1498.360 kb on - strand at 1498.360 kb on - strand at 1498.360 kb on - strand at 1498.360 kb on - strand at 1498.360 kb on - strand at 1498.360 kb on - strand at 1498.360 kb on - strand at 1498.367 kb on + strand at 1498.367 kb on + strand at 1498.367 kb on + strand at 1498.369 kb on + strand at 1498.375 kb on - strand at 1498.375 kb on - strand at 1498.375 kb on - strand at 1498.404 kb on + strand at 1498.404 kb on + strand at 1498.429 kb on - strand at 1498.429 kb on - strand at 1498.462 kb on + strand at 1498.474 kb on + strand at 1498.482 kb on - strand at 1498.700 kb on + strand at 1498.771 kb on + strand at 1498.778 kb on + strand at 1498.779 kb on - strand at 1498.814 kb on + strand at 1498.814 kb on + strand at 1498.814 kb on + strand at 1498.814 kb on + strand at 1498.814 kb on + strand at 1498.814 kb on + strand at 1498.814 kb on - strand at 1498.822 kb on - strand at 1498.917 kb on + strand, within B158DRAFT_1445 at 1498.925 kb on - strand, within B158DRAFT_1445 at 1498.935 kb on - strand, within B158DRAFT_1445 at 1498.954 kb on + strand, within B158DRAFT_1445 at 1499.036 kb on - strand, within B158DRAFT_1445 at 1499.085 kb on + strand, within B158DRAFT_1445 at 1499.085 kb on + strand, within B158DRAFT_1445 at 1499.106 kb on + strand, within B158DRAFT_1445 at 1499.216 kb on - strand, within B158DRAFT_1445 at 1499.229 kb on + strand, within B158DRAFT_1445 at 1499.254 kb on - strand, within B158DRAFT_1445 at 1499.303 kb on - strand, within B158DRAFT_1445 at 1499.325 kb on - strand, within B158DRAFT_1445 at 1499.348 kb on + strand, within B158DRAFT_1445 at 1499.386 kb on + strand, within B158DRAFT_1445 at 1499.435 kb on + strand, within B158DRAFT_1445 at 1499.439 kb on - strand, within B158DRAFT_1445 at 1499.460 kb on + strand, within B158DRAFT_1445 at 1499.509 kb on + strand, within B158DRAFT_1445 at 1499.510 kb on + strand, within B158DRAFT_1445 at 1499.528 kb on + strand at 1499.545 kb on + strand at 1499.555 kb on + strand at 1499.558 kb on - strand at 1499.562 kb on + strand at 1499.563 kb on - strand at 1499.600 kb on + strand at 1499.605 kb on + strand at 1499.717 kb on - strand at 1499.747 kb on + strand at 1499.747 kb on + strand at 1499.755 kb on - strand at 1499.758 kb on + strand at 1499.785 kb on - strand at 1499.795 kb on - strand at 1499.808 kb on + strand at 1499.867 kb on + strand at 1499.867 kb on + strand at 1499.874 kb on - strand at 1499.875 kb on - strand at 1499.875 kb on - strand at 1499.929 kb on - strand at 1500.010 kb on + strand at 1500.037 kb on + strand at 1500.177 kb on - strand, within B158DRAFT_1446 at 1500.187 kb on + strand, within B158DRAFT_1446 at 1500.224 kb on - strand, within B158DRAFT_1446 at 1500.226 kb on + strand, within B158DRAFT_1446 at 1500.233 kb on + strand, within B158DRAFT_1446 at 1500.276 kb on + strand, within B158DRAFT_1446 at 1500.284 kb on - strand, within B158DRAFT_1446 at 1500.284 kb on - strand, within B158DRAFT_1446 at 1500.286 kb on + strand, within B158DRAFT_1446 at 1500.286 kb on + strand, within B158DRAFT_1446 at 1500.294 kb on - strand, within B158DRAFT_1446 at 1500.323 kb on - strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.354 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.392 kb on - strand, within B158DRAFT_1446 at 1500.445 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on - strand, within B158DRAFT_1446 at 1500.481 kb on + strand, within B158DRAFT_1446 at 1500.488 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on - strand, within B158DRAFT_1446 at 1500.504 kb on - strand, within B158DRAFT_1446 at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.579 kb on + strand at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.593 kb on + strand, within B158DRAFT_1446
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM remove 1,497,799 - B158DRAFT_1444 0.68 +2.9 1,497,804 - B158DRAFT_1444 0.68 -0.6 1,497,964 + B158DRAFT_1444 0.76 -0.4 1,497,984 + B158DRAFT_1444 0.77 +2.4 1,498,012 - B158DRAFT_1444 0.79 +1.3 1,498,042 + B158DRAFT_1444 0.80 +2.6 1,498,136 + B158DRAFT_1444 0.85 +2.5 1,498,149 - B158DRAFT_1444 0.86 +1.8 1,498,201 + B158DRAFT_1444 0.88 +2.4 1,498,232 + +2.4 1,498,240 - +2.5 1,498,299 + +3.5 1,498,307 - +2.4 1,498,333 + +2.2 1,498,341 - +2.9 1,498,343 + +2.7 1,498,343 + +2.5 1,498,351 - +2.5 1,498,351 - +2.5 1,498,352 + +2.4 1,498,352 + +2.3 1,498,357 + +2.6 1,498,360 - +2.8 1,498,360 - +2.0 1,498,360 - +2.5 1,498,360 - +2.1 1,498,360 - +2.2 1,498,360 - +2.8 1,498,360 - +2.5 1,498,367 + +2.7 1,498,367 + +0.8 1,498,367 + +1.8 1,498,369 + +2.1 1,498,375 - +2.1 1,498,375 - +2.2 1,498,375 - +2.2 1,498,404 + +2.7 1,498,404 + +2.7 1,498,429 - +0.6 1,498,429 - +0.4 1,498,462 + +1.4 1,498,474 + +3.2 1,498,482 - +0.9 1,498,700 + +0.7 1,498,771 + -1.6 1,498,778 + -0.0 1,498,779 - -1.7 1,498,814 + -2.6 1,498,814 + -2.2 1,498,814 + -3.1 1,498,814 + +0.1 1,498,814 + -2.1 1,498,814 + -0.9 1,498,814 - +0.7 1,498,822 - -1.6 1,498,917 + B158DRAFT_1445 0.15 -2.2 1,498,925 - B158DRAFT_1445 0.16 -0.1 1,498,935 - B158DRAFT_1445 0.17 -1.1 1,498,954 + B158DRAFT_1445 0.20 -0.1 1,499,036 - B158DRAFT_1445 0.30 -2.4 1,499,085 + B158DRAFT_1445 0.36 -1.7 1,499,085 + B158DRAFT_1445 0.36 -0.5 1,499,106 + B158DRAFT_1445 0.38 -0.0 1,499,216 - B158DRAFT_1445 0.52 -2.4 1,499,229 + B158DRAFT_1445 0.54 -0.7 1,499,254 - B158DRAFT_1445 0.57 -0.9 1,499,303 - B158DRAFT_1445 0.63 +1.2 1,499,325 - B158DRAFT_1445 0.66 -1.1 1,499,348 + B158DRAFT_1445 0.69 -0.8 1,499,386 + B158DRAFT_1445 0.73 -1.2 1,499,435 + B158DRAFT_1445 0.79 -0.4 1,499,439 - B158DRAFT_1445 0.80 -0.2 1,499,460 + B158DRAFT_1445 0.82 -1.0 1,499,509 + B158DRAFT_1445 0.89 -1.0 1,499,510 + B158DRAFT_1445 0.89 -0.7 1,499,528 + -1.4 1,499,545 + -2.4 1,499,555 + +0.9 1,499,558 - -1.1 1,499,562 + -0.5 1,499,563 - -0.6 1,499,600 + -2.0 1,499,605 + -1.0 1,499,717 - -1.6 1,499,747 + -0.0 1,499,747 + +0.6 1,499,755 - -1.1 1,499,758 + -2.1 1,499,785 - -0.7 1,499,795 - -0.8 1,499,808 + -0.6 1,499,867 + +2.6 1,499,867 + -2.8 1,499,874 - -0.4 1,499,875 - -2.2 1,499,875 - -0.0 1,499,929 - +0.3 1,500,010 + -2.6 1,500,037 + -1.7 1,500,177 - B158DRAFT_1446 0.18 -0.9 1,500,187 + B158DRAFT_1446 0.19 -1.0 1,500,224 - B158DRAFT_1446 0.23 -1.3 1,500,226 + B158DRAFT_1446 0.23 -0.7 1,500,233 + B158DRAFT_1446 0.24 -1.3 1,500,276 + B158DRAFT_1446 0.28 +0.4 1,500,284 - B158DRAFT_1446 0.28 -2.4 1,500,284 - B158DRAFT_1446 0.28 -2.1 1,500,286 + B158DRAFT_1446 0.29 -3.4 1,500,286 + B158DRAFT_1446 0.29 -1.8 1,500,294 - B158DRAFT_1446 0.29 -1.6 1,500,323 - B158DRAFT_1446 0.32 +1.3 1,500,351 + B158DRAFT_1446 0.35 -0.3 1,500,351 + B158DRAFT_1446 0.35 +0.4 1,500,351 + B158DRAFT_1446 0.35 -1.8 1,500,351 + B158DRAFT_1446 0.35 -1.0 1,500,351 + B158DRAFT_1446 0.35 -1.1 1,500,354 - B158DRAFT_1446 0.35 +2.3 1,500,359 - B158DRAFT_1446 0.35 -1.0 1,500,359 - B158DRAFT_1446 0.35 -2.9 1,500,359 - B158DRAFT_1446 0.35 -0.7 1,500,359 - B158DRAFT_1446 0.35 -1.4 1,500,359 - B158DRAFT_1446 0.35 -2.0 1,500,359 - B158DRAFT_1446 0.35 -1.4 1,500,359 - B158DRAFT_1446 0.35 -2.3 1,500,359 - B158DRAFT_1446 0.35 -0.8 1,500,359 - B158DRAFT_1446 0.35 -1.8 1,500,359 - B158DRAFT_1446 0.35 -1.5 1,500,359 - B158DRAFT_1446 0.35 -1.3 1,500,359 - B158DRAFT_1446 0.35 -1.8 1,500,359 - B158DRAFT_1446 0.35 -0.9 1,500,392 - B158DRAFT_1446 0.39 -1.0 1,500,445 + B158DRAFT_1446 0.44 -3.3 1,500,460 + B158DRAFT_1446 0.45 -1.8 1,500,460 + B158DRAFT_1446 0.45 +1.4 1,500,460 - B158DRAFT_1446 0.45 -1.8 1,500,481 + B158DRAFT_1446 0.47 +0.4 1,500,488 + B158DRAFT_1446 0.48 -2.0 1,500,496 + B158DRAFT_1446 0.48 -2.0 1,500,496 + B158DRAFT_1446 0.48 -0.4 1,500,496 - B158DRAFT_1446 0.48 -2.3 1,500,504 - B158DRAFT_1446 0.49 -2.7 1,500,579 + B158DRAFT_1446 0.56 -1.6 1,500,579 + B158DRAFT_1446 0.56 -2.4 1,500,579 + +1.7 1,500,579 + B158DRAFT_1446 0.56 -1.7 1,500,587 - B158DRAFT_1446 0.57 -2.0 1,500,587 - B158DRAFT_1446 0.57 -0.8 1,500,587 - B158DRAFT_1446 0.57 -1.3 1,500,593 + B158DRAFT_1446 0.58 -3.4
Or see this region's nucleotide sequence