Experiment: m.b. Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1435 and B158DRAFT_1436 are separated by 119 nucleotides B158DRAFT_1436 and B158DRAFT_1437 are separated by 91 nucleotides B158DRAFT_1437 and B158DRAFT_1438 are separated by 48 nucleotides
B158DRAFT_1435: B158DRAFT_1435 - N-formylglutamate amidohydrolase, at 1,486,571 to 1,487,779
_1435
B158DRAFT_1436: B158DRAFT_1436 - azurin, at 1,487,899 to 1,488,324
_1436
B158DRAFT_1437: B158DRAFT_1437 - imidazolonepropionase (EC 3.5.2.7), at 1,488,416 to 1,489,645
_1437
B158DRAFT_1438: B158DRAFT_1438 - formiminoglutamate deiminase, at 1,489,694 to 1,491,103
_1438
Position (kb)
1488
1489
1490 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1487.449 kb on - strand, within B158DRAFT_1435 at 1487.516 kb on - strand, within B158DRAFT_1435 at 1487.528 kb on - strand, within B158DRAFT_1435 at 1487.587 kb on + strand, within B158DRAFT_1435 at 1487.587 kb on + strand, within B158DRAFT_1435 at 1487.587 kb on + strand, within B158DRAFT_1435 at 1487.595 kb on - strand, within B158DRAFT_1435 at 1487.595 kb on - strand, within B158DRAFT_1435 at 1487.611 kb on + strand, within B158DRAFT_1435 at 1487.611 kb on + strand, within B158DRAFT_1435 at 1487.611 kb on + strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.629 kb on - strand, within B158DRAFT_1435 at 1487.629 kb on - strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.855 kb on - strand at 1487.883 kb on + strand at 1487.891 kb on - strand at 1487.891 kb on - strand at 1487.891 kb on - strand at 1488.055 kb on + strand, within B158DRAFT_1436 at 1488.079 kb on + strand, within B158DRAFT_1436 at 1488.079 kb on + strand, within B158DRAFT_1436 at 1488.079 kb on + strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.105 kb on + strand, within B158DRAFT_1436 at 1488.113 kb on - strand, within B158DRAFT_1436 at 1488.113 kb on - strand, within B158DRAFT_1436 at 1488.115 kb on + strand, within B158DRAFT_1436 at 1488.115 kb on + strand, within B158DRAFT_1436 at 1488.144 kb on + strand, within B158DRAFT_1436 at 1488.172 kb on + strand, within B158DRAFT_1436 at 1488.174 kb on - strand, within B158DRAFT_1436 at 1488.180 kb on - strand, within B158DRAFT_1436 at 1488.233 kb on + strand, within B158DRAFT_1436 at 1488.381 kb on - strand at 1488.404 kb on + strand at 1488.413 kb on + strand at 1488.413 kb on + strand at 1488.421 kb on - strand at 1488.421 kb on - strand at 1488.517 kb on + strand at 1488.517 kb on + strand at 1488.517 kb on + strand at 1488.525 kb on - strand at 1488.525 kb on - strand at 1488.525 kb on - strand at 1488.525 kb on - strand at 1488.561 kb on + strand, within B158DRAFT_1437 at 1488.569 kb on - strand, within B158DRAFT_1437 at 1488.621 kb on + strand, within B158DRAFT_1437 at 1488.759 kb on + strand, within B158DRAFT_1437 at 1488.759 kb on + strand, within B158DRAFT_1437 at 1488.862 kb on + strand, within B158DRAFT_1437 at 1488.863 kb on + strand, within B158DRAFT_1437 at 1488.867 kb on + strand, within B158DRAFT_1437 at 1488.875 kb on - strand, within B158DRAFT_1437 at 1488.899 kb on + strand, within B158DRAFT_1437 at 1488.912 kb on + strand, within B158DRAFT_1437 at 1488.921 kb on - strand, within B158DRAFT_1437 at 1488.930 kb on - strand, within B158DRAFT_1437 at 1488.952 kb on + strand, within B158DRAFT_1437 at 1488.952 kb on + strand, within B158DRAFT_1437 at 1489.001 kb on - strand, within B158DRAFT_1437 at 1489.001 kb on - strand, within B158DRAFT_1437 at 1489.027 kb on - strand, within B158DRAFT_1437 at 1489.085 kb on - strand, within B158DRAFT_1437 at 1489.093 kb on - strand, within B158DRAFT_1437 at 1489.181 kb on + strand, within B158DRAFT_1437 at 1489.222 kb on - strand, within B158DRAFT_1437 at 1489.286 kb on - strand, within B158DRAFT_1437 at 1489.288 kb on + strand, within B158DRAFT_1437 at 1489.288 kb on + strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.313 kb on + strand, within B158DRAFT_1437 at 1489.313 kb on + strand, within B158DRAFT_1437 at 1489.394 kb on + strand, within B158DRAFT_1437 at 1489.402 kb on + strand, within B158DRAFT_1437 at 1489.428 kb on - strand, within B158DRAFT_1437 at 1489.469 kb on + strand, within B158DRAFT_1437 at 1489.477 kb on - strand, within B158DRAFT_1437 at 1489.477 kb on - strand, within B158DRAFT_1437 at 1489.488 kb on + strand, within B158DRAFT_1437 at 1489.533 kb on - strand at 1489.589 kb on + strand at 1489.624 kb on - strand at 1489.669 kb on + strand at 1489.677 kb on - strand at 1489.740 kb on - strand at 1489.750 kb on - strand at 1489.768 kb on + strand at 1489.776 kb on - strand at 1489.909 kb on + strand, within B158DRAFT_1438 at 1489.970 kb on + strand, within B158DRAFT_1438 at 1490.120 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.328 kb on - strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.368 kb on - strand, within B158DRAFT_1438 at 1490.381 kb on + strand, within B158DRAFT_1438 at 1490.381 kb on - strand, within B158DRAFT_1438 at 1490.391 kb on - strand, within B158DRAFT_1438 at 1490.393 kb on + strand, within B158DRAFT_1438 at 1490.444 kb on + strand, within B158DRAFT_1438 at 1490.462 kb on - strand, within B158DRAFT_1438 at 1490.473 kb on + strand, within B158DRAFT_1438 at 1490.480 kb on + strand, within B158DRAFT_1438 at 1490.481 kb on - strand, within B158DRAFT_1438 at 1490.483 kb on - strand, within B158DRAFT_1438 at 1490.505 kb on + strand, within B158DRAFT_1438 at 1490.537 kb on + strand, within B158DRAFT_1438 at 1490.555 kb on - strand, within B158DRAFT_1438
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM remove 1,487,449 - B158DRAFT_1435 0.73 -2.2 1,487,516 - B158DRAFT_1435 0.78 +1.0 1,487,528 - B158DRAFT_1435 0.79 -1.1 1,487,587 + B158DRAFT_1435 0.84 -0.1 1,487,587 + B158DRAFT_1435 0.84 -1.6 1,487,587 + B158DRAFT_1435 0.84 -0.1 1,487,595 - B158DRAFT_1435 0.85 -1.8 1,487,595 - B158DRAFT_1435 0.85 -0.0 1,487,611 + B158DRAFT_1435 0.86 -1.4 1,487,611 + B158DRAFT_1435 0.86 -2.5 1,487,611 + B158DRAFT_1435 0.86 -1.4 1,487,619 - B158DRAFT_1435 0.87 -2.0 1,487,619 - B158DRAFT_1435 0.87 -1.9 1,487,619 - B158DRAFT_1435 0.87 -2.2 1,487,619 - B158DRAFT_1435 0.87 -2.9 1,487,629 - B158DRAFT_1435 0.88 -0.6 1,487,629 - B158DRAFT_1435 0.88 -1.3 1,487,635 + B158DRAFT_1435 0.88 -0.9 1,487,635 + B158DRAFT_1435 0.88 -1.8 1,487,635 + B158DRAFT_1435 0.88 -0.5 1,487,635 + B158DRAFT_1435 0.88 -0.9 1,487,635 + B158DRAFT_1435 0.88 -1.3 1,487,643 - B158DRAFT_1435 0.89 -2.2 1,487,643 - B158DRAFT_1435 0.89 +1.1 1,487,643 - B158DRAFT_1435 0.89 -2.0 1,487,643 - B158DRAFT_1435 0.89 -2.4 1,487,643 - B158DRAFT_1435 0.89 -1.1 1,487,855 - -1.2 1,487,883 + +1.7 1,487,891 - -1.7 1,487,891 - -2.4 1,487,891 - +1.0 1,488,055 + B158DRAFT_1436 0.37 -0.3 1,488,079 + B158DRAFT_1436 0.42 -0.0 1,488,079 + B158DRAFT_1436 0.42 -0.1 1,488,079 + B158DRAFT_1436 0.42 -0.7 1,488,087 - B158DRAFT_1436 0.44 -2.6 1,488,087 - B158DRAFT_1436 0.44 -0.4 1,488,087 - B158DRAFT_1436 0.44 -0.4 1,488,087 - B158DRAFT_1436 0.44 -3.0 1,488,105 + B158DRAFT_1436 0.48 -0.6 1,488,113 - B158DRAFT_1436 0.50 +1.3 1,488,113 - B158DRAFT_1436 0.50 -0.9 1,488,115 + B158DRAFT_1436 0.51 +0.2 1,488,115 + B158DRAFT_1436 0.51 -2.3 1,488,144 + B158DRAFT_1436 0.58 -0.1 1,488,172 + B158DRAFT_1436 0.64 -0.8 1,488,174 - B158DRAFT_1436 0.65 +2.2 1,488,180 - B158DRAFT_1436 0.66 +0.1 1,488,233 + B158DRAFT_1436 0.78 +0.1 1,488,381 - -2.3 1,488,404 + +1.1 1,488,413 + -0.7 1,488,413 + +0.0 1,488,421 - -2.1 1,488,421 - +0.3 1,488,517 + -1.2 1,488,517 + -1.1 1,488,517 + -0.9 1,488,525 - +0.7 1,488,525 - -1.3 1,488,525 - +1.2 1,488,525 - -0.8 1,488,561 + B158DRAFT_1437 0.12 +0.4 1,488,569 - B158DRAFT_1437 0.12 -0.1 1,488,621 + B158DRAFT_1437 0.17 -0.2 1,488,759 + B158DRAFT_1437 0.28 -2.4 1,488,759 + B158DRAFT_1437 0.28 -0.1 1,488,862 + B158DRAFT_1437 0.36 -0.5 1,488,863 + B158DRAFT_1437 0.36 +0.4 1,488,867 + B158DRAFT_1437 0.37 -1.0 1,488,875 - B158DRAFT_1437 0.37 -0.3 1,488,899 + B158DRAFT_1437 0.39 -0.4 1,488,912 + B158DRAFT_1437 0.40 -0.0 1,488,921 - B158DRAFT_1437 0.41 +0.3 1,488,930 - B158DRAFT_1437 0.42 +0.0 1,488,952 + B158DRAFT_1437 0.44 -0.6 1,488,952 + B158DRAFT_1437 0.44 +1.1 1,489,001 - B158DRAFT_1437 0.48 -0.3 1,489,001 - B158DRAFT_1437 0.48 -0.7 1,489,027 - B158DRAFT_1437 0.50 -0.4 1,489,085 - B158DRAFT_1437 0.54 -0.6 1,489,093 - B158DRAFT_1437 0.55 -1.1 1,489,181 + B158DRAFT_1437 0.62 -0.6 1,489,222 - B158DRAFT_1437 0.66 -0.4 1,489,286 - B158DRAFT_1437 0.71 -1.9 1,489,288 + B158DRAFT_1437 0.71 -0.8 1,489,288 + B158DRAFT_1437 0.71 -0.2 1,489,296 - B158DRAFT_1437 0.72 -3.6 1,489,296 - B158DRAFT_1437 0.72 -0.9 1,489,296 - B158DRAFT_1437 0.72 -2.5 1,489,296 - B158DRAFT_1437 0.72 -0.7 1,489,313 + B158DRAFT_1437 0.73 -0.4 1,489,313 + B158DRAFT_1437 0.73 -0.9 1,489,394 + B158DRAFT_1437 0.80 -1.0 1,489,402 + B158DRAFT_1437 0.80 -1.7 1,489,428 - B158DRAFT_1437 0.82 +1.5 1,489,469 + B158DRAFT_1437 0.86 -2.4 1,489,477 - B158DRAFT_1437 0.86 -1.3 1,489,477 - B158DRAFT_1437 0.86 -1.1 1,489,488 + B158DRAFT_1437 0.87 +1.2 1,489,533 - -0.7 1,489,589 + -2.0 1,489,624 - -0.6 1,489,669 + +0.4 1,489,677 - -0.7 1,489,740 - -0.8 1,489,750 - -0.1 1,489,768 + -1.9 1,489,776 - +0.6 1,489,909 + B158DRAFT_1438 0.15 -0.1 1,489,970 + B158DRAFT_1438 0.20 -0.3 1,490,120 + B158DRAFT_1438 0.30 -0.4 1,490,322 + B158DRAFT_1438 0.45 -2.0 1,490,322 + B158DRAFT_1438 0.45 -0.8 1,490,328 - B158DRAFT_1438 0.45 -1.3 1,490,360 + B158DRAFT_1438 0.47 +0.0 1,490,360 + B158DRAFT_1438 0.47 -0.3 1,490,360 + B158DRAFT_1438 0.47 +1.0 1,490,368 - B158DRAFT_1438 0.48 -2.1 1,490,381 + B158DRAFT_1438 0.49 +0.0 1,490,381 - B158DRAFT_1438 0.49 +0.4 1,490,391 - B158DRAFT_1438 0.49 -2.4 1,490,393 + B158DRAFT_1438 0.50 +0.5 1,490,444 + B158DRAFT_1438 0.53 +0.1 1,490,462 - B158DRAFT_1438 0.54 -1.6 1,490,473 + B158DRAFT_1438 0.55 -0.1 1,490,480 + B158DRAFT_1438 0.56 -1.9 1,490,481 - B158DRAFT_1438 0.56 -2.2 1,490,483 - B158DRAFT_1438 0.56 +0.2 1,490,505 + B158DRAFT_1438 0.58 -0.5 1,490,537 + B158DRAFT_1438 0.60 -0.7 1,490,555 - B158DRAFT_1438 0.61 -0.3
Or see this region's nucleotide sequence