Experiment: m.b. Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1177 and B158DRAFT_1178 are separated by 44 nucleotides B158DRAFT_1178 and B158DRAFT_1179 are separated by 116 nucleotides
B158DRAFT_1177: B158DRAFT_1177 - hypothetical protein, at 1,216,115 to 1,217,236
_1177
B158DRAFT_1178: B158DRAFT_1178 - Sortase and related acyltransferases, at 1,217,281 to 1,217,772
_1178
B158DRAFT_1179: B158DRAFT_1179 - Uncharacterized protein conserved in bacteria, at 1,217,889 to 1,218,884
_1179
Position (kb)
1217
1218 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1216.286 kb on - strand, within B158DRAFT_1177 at 1216.315 kb on + strand, within B158DRAFT_1177 at 1216.321 kb on + strand, within B158DRAFT_1177 at 1216.324 kb on - strand, within B158DRAFT_1177 at 1216.329 kb on - strand, within B158DRAFT_1177 at 1216.334 kb on - strand, within B158DRAFT_1177 at 1216.447 kb on - strand, within B158DRAFT_1177 at 1216.472 kb on - strand, within B158DRAFT_1177 at 1216.531 kb on + strand, within B158DRAFT_1177 at 1216.654 kb on + strand, within B158DRAFT_1177 at 1216.654 kb on + strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.668 kb on + strand, within B158DRAFT_1177 at 1216.702 kb on - strand, within B158DRAFT_1177 at 1216.741 kb on + strand, within B158DRAFT_1177 at 1216.764 kb on - strand, within B158DRAFT_1177 at 1216.798 kb on + strand, within B158DRAFT_1177 at 1216.842 kb on - strand, within B158DRAFT_1177 at 1216.876 kb on + strand, within B158DRAFT_1177 at 1216.981 kb on + strand, within B158DRAFT_1177 at 1216.994 kb on + strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.039 kb on + strand, within B158DRAFT_1177 at 1217.039 kb on + strand, within B158DRAFT_1177 at 1217.044 kb on + strand, within B158DRAFT_1177 at 1217.061 kb on - strand, within B158DRAFT_1177 at 1217.082 kb on + strand, within B158DRAFT_1177 at 1217.123 kb on - strand, within B158DRAFT_1177 at 1217.128 kb on - strand at 1217.128 kb on - strand at 1217.166 kb on + strand at 1217.168 kb on - strand at 1217.196 kb on - strand at 1217.316 kb on - strand at 1217.321 kb on - strand at 1217.388 kb on + strand, within B158DRAFT_1178 at 1217.403 kb on - strand, within B158DRAFT_1178 at 1217.412 kb on + strand, within B158DRAFT_1178 at 1217.420 kb on - strand, within B158DRAFT_1178 at 1217.422 kb on + strand, within B158DRAFT_1178 at 1217.447 kb on + strand, within B158DRAFT_1178 at 1217.478 kb on + strand, within B158DRAFT_1178 at 1217.478 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.529 kb on + strand, within B158DRAFT_1178 at 1217.529 kb on + strand, within B158DRAFT_1178 at 1217.542 kb on + strand, within B158DRAFT_1178 at 1217.581 kb on - strand, within B158DRAFT_1178 at 1217.616 kb on + strand, within B158DRAFT_1178 at 1217.623 kb on - strand, within B158DRAFT_1178 at 1217.643 kb on + strand, within B158DRAFT_1178 at 1217.659 kb on + strand, within B158DRAFT_1178 at 1217.756 kb on - strand at 1217.756 kb on - strand at 1217.864 kb on - strand at 1217.950 kb on + strand at 1217.950 kb on + strand at 1217.964 kb on - strand at 1217.965 kb on - strand at 1218.012 kb on - strand, within B158DRAFT_1179 at 1218.067 kb on + strand, within B158DRAFT_1179 at 1218.067 kb on + strand, within B158DRAFT_1179 at 1218.085 kb on - strand, within B158DRAFT_1179 at 1218.126 kb on + strand, within B158DRAFT_1179 at 1218.127 kb on + strand, within B158DRAFT_1179 at 1218.134 kb on + strand, within B158DRAFT_1179 at 1218.168 kb on + strand, within B158DRAFT_1179 at 1218.223 kb on + strand, within B158DRAFT_1179 at 1218.223 kb on + strand, within B158DRAFT_1179 at 1218.231 kb on - strand, within B158DRAFT_1179 at 1218.231 kb on - strand, within B158DRAFT_1179 at 1218.291 kb on - strand, within B158DRAFT_1179 at 1218.301 kb on + strand, within B158DRAFT_1179 at 1218.301 kb on + strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.314 kb on - strand, within B158DRAFT_1179 at 1218.326 kb on + strand, within B158DRAFT_1179 at 1218.498 kb on + strand, within B158DRAFT_1179 at 1218.530 kb on + strand, within B158DRAFT_1179 at 1218.549 kb on + strand, within B158DRAFT_1179 at 1218.557 kb on - strand, within B158DRAFT_1179 at 1218.557 kb on - strand, within B158DRAFT_1179 at 1218.557 kb on - strand, within B158DRAFT_1179 at 1218.613 kb on - strand, within B158DRAFT_1179 at 1218.639 kb on + strand, within B158DRAFT_1179 at 1218.691 kb on - strand, within B158DRAFT_1179 at 1218.746 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.767 kb on + strand, within B158DRAFT_1179
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM remove 1,216,286 - B158DRAFT_1177 0.15 -1.8 1,216,315 + B158DRAFT_1177 0.18 -0.8 1,216,321 + B158DRAFT_1177 0.18 +0.9 1,216,324 - B158DRAFT_1177 0.19 +0.7 1,216,329 - B158DRAFT_1177 0.19 -0.0 1,216,334 - B158DRAFT_1177 0.20 +0.2 1,216,447 - B158DRAFT_1177 0.30 +2.3 1,216,472 - B158DRAFT_1177 0.32 +0.8 1,216,531 + B158DRAFT_1177 0.37 -0.9 1,216,654 + B158DRAFT_1177 0.48 -1.4 1,216,654 + B158DRAFT_1177 0.48 +0.5 1,216,662 - B158DRAFT_1177 0.49 +2.9 1,216,662 - B158DRAFT_1177 0.49 +2.2 1,216,662 - B158DRAFT_1177 0.49 -1.6 1,216,668 + B158DRAFT_1177 0.49 -1.0 1,216,702 - B158DRAFT_1177 0.52 -1.5 1,216,741 + B158DRAFT_1177 0.56 -1.0 1,216,764 - B158DRAFT_1177 0.58 -0.0 1,216,798 + B158DRAFT_1177 0.61 -0.3 1,216,842 - B158DRAFT_1177 0.65 -1.3 1,216,876 + B158DRAFT_1177 0.68 +0.2 1,216,981 + B158DRAFT_1177 0.77 -1.0 1,216,994 + B158DRAFT_1177 0.78 -0.6 1,217,002 - B158DRAFT_1177 0.79 -0.2 1,217,002 - B158DRAFT_1177 0.79 -0.4 1,217,002 - B158DRAFT_1177 0.79 +0.5 1,217,012 - B158DRAFT_1177 0.80 -0.2 1,217,012 - B158DRAFT_1177 0.80 -0.7 1,217,012 - B158DRAFT_1177 0.80 -1.5 1,217,022 + B158DRAFT_1177 0.81 -1.3 1,217,022 + B158DRAFT_1177 0.81 -1.8 1,217,022 + B158DRAFT_1177 0.81 +0.3 1,217,039 + B158DRAFT_1177 0.82 +0.6 1,217,039 + B158DRAFT_1177 0.82 +0.2 1,217,044 + B158DRAFT_1177 0.83 -0.9 1,217,061 - B158DRAFT_1177 0.84 -0.1 1,217,082 + B158DRAFT_1177 0.86 -1.4 1,217,123 - B158DRAFT_1177 0.90 -0.8 1,217,128 - -0.1 1,217,128 - -1.1 1,217,166 + -2.5 1,217,168 - -1.2 1,217,196 - -0.1 1,217,316 - +0.7 1,217,321 - +0.9 1,217,388 + B158DRAFT_1178 0.22 +1.8 1,217,403 - B158DRAFT_1178 0.25 -0.6 1,217,412 + B158DRAFT_1178 0.27 -1.1 1,217,420 - B158DRAFT_1178 0.28 -0.5 1,217,422 + B158DRAFT_1178 0.29 -1.2 1,217,447 + B158DRAFT_1178 0.34 +0.1 1,217,478 + B158DRAFT_1178 0.40 -1.0 1,217,478 + B158DRAFT_1178 0.40 +1.1 1,217,491 + B158DRAFT_1178 0.43 -0.8 1,217,491 + B158DRAFT_1178 0.43 +1.6 1,217,491 + B158DRAFT_1178 0.43 -0.7 1,217,491 + B158DRAFT_1178 0.43 -0.1 1,217,499 - B158DRAFT_1178 0.44 +0.5 1,217,499 - B158DRAFT_1178 0.44 -0.4 1,217,499 - B158DRAFT_1178 0.44 +0.3 1,217,499 - B158DRAFT_1178 0.44 -0.2 1,217,499 - B158DRAFT_1178 0.44 -1.3 1,217,499 - B158DRAFT_1178 0.44 -1.4 1,217,499 - B158DRAFT_1178 0.44 -1.7 1,217,499 - B158DRAFT_1178 0.44 +0.1 1,217,529 + B158DRAFT_1178 0.50 -0.4 1,217,529 + B158DRAFT_1178 0.50 +0.6 1,217,542 + B158DRAFT_1178 0.53 -1.1 1,217,581 - B158DRAFT_1178 0.61 +0.3 1,217,616 + B158DRAFT_1178 0.68 -1.4 1,217,623 - B158DRAFT_1178 0.70 +2.5 1,217,643 + B158DRAFT_1178 0.74 -1.4 1,217,659 + B158DRAFT_1178 0.77 +0.3 1,217,756 - +0.6 1,217,756 - -1.1 1,217,864 - +0.2 1,217,950 + -1.3 1,217,950 + -1.3 1,217,964 - +0.3 1,217,965 - +0.6 1,218,012 - B158DRAFT_1179 0.12 -0.5 1,218,067 + B158DRAFT_1179 0.18 -1.9 1,218,067 + B158DRAFT_1179 0.18 -0.1 1,218,085 - B158DRAFT_1179 0.20 -2.4 1,218,126 + B158DRAFT_1179 0.24 -1.2 1,218,127 + B158DRAFT_1179 0.24 -2.0 1,218,134 + B158DRAFT_1179 0.25 +0.3 1,218,168 + B158DRAFT_1179 0.28 -2.3 1,218,223 + B158DRAFT_1179 0.34 +0.1 1,218,223 + B158DRAFT_1179 0.34 -2.6 1,218,231 - B158DRAFT_1179 0.34 +0.6 1,218,231 - B158DRAFT_1179 0.34 -0.1 1,218,291 - B158DRAFT_1179 0.40 -3.1 1,218,301 + B158DRAFT_1179 0.41 -0.6 1,218,301 + B158DRAFT_1179 0.41 +0.5 1,218,309 - B158DRAFT_1179 0.42 -0.4 1,218,309 - B158DRAFT_1179 0.42 +0.4 1,218,309 - B158DRAFT_1179 0.42 +0.3 1,218,309 - B158DRAFT_1179 0.42 -1.6 1,218,309 - B158DRAFT_1179 0.42 +1.6 1,218,309 - B158DRAFT_1179 0.42 +2.3 1,218,309 - B158DRAFT_1179 0.42 -0.1 1,218,309 - B158DRAFT_1179 0.42 -3.0 1,218,314 - B158DRAFT_1179 0.43 -0.2 1,218,326 + B158DRAFT_1179 0.44 -0.5 1,218,498 + B158DRAFT_1179 0.61 -0.6 1,218,530 + B158DRAFT_1179 0.64 -3.2 1,218,549 + B158DRAFT_1179 0.66 +1.5 1,218,557 - B158DRAFT_1179 0.67 +2.6 1,218,557 - B158DRAFT_1179 0.67 +1.1 1,218,557 - B158DRAFT_1179 0.67 -1.2 1,218,613 - B158DRAFT_1179 0.73 -0.4 1,218,639 + B158DRAFT_1179 0.75 -0.3 1,218,691 - B158DRAFT_1179 0.81 +0.9 1,218,746 + B158DRAFT_1179 0.86 -0.6 1,218,766 + B158DRAFT_1179 0.88 -0.4 1,218,766 + B158DRAFT_1179 0.88 -1.2 1,218,766 + B158DRAFT_1179 0.88 -1.7 1,218,766 + B158DRAFT_1179 0.88 -2.6 1,218,767 + B158DRAFT_1179 0.88 +0.1
Or see this region's nucleotide sequence