Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0972

Experiment: m.b. Chlorite 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0969 and B158DRAFT_0970 are separated by 139 nucleotidesB158DRAFT_0970 and B158DRAFT_0971 overlap by 4 nucleotidesB158DRAFT_0971 and B158DRAFT_0972 are separated by 29 nucleotidesB158DRAFT_0972 and B158DRAFT_0973 are separated by 37 nucleotides B158DRAFT_0969: B158DRAFT_0969 - SsrA-binding protein, at 1,001,066 to 1,001,539 _0969 B158DRAFT_0970: B158DRAFT_0970 - Oligoketide cyclase/lipid transport protein, at 1,001,679 to 1,002,113 _0970 B158DRAFT_0971: B158DRAFT_0971 - Uncharacterized protein conserved in bacteria, at 1,002,110 to 1,002,403 _0971 B158DRAFT_0972: B158DRAFT_0972 - 3-deoxy-D-manno-octulosonic-acid transferase, at 1,002,433 to 1,003,680 _0972 B158DRAFT_0973: B158DRAFT_0973 - type I secretion outer membrane protein, TolC family, at 1,003,718 to 1,005,091 _0973 Position (kb) 1002 1003 1004Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 1001.474 kb on + strand, within B158DRAFT_0969at 1001.474 kb on + strand, within B158DRAFT_0969at 1001.482 kb on - strand, within B158DRAFT_0969at 1001.482 kb on - strand, within B158DRAFT_0969at 1001.487 kb on + strand, within B158DRAFT_0969at 1001.495 kb on - strandat 1001.495 kb on - strandat 1001.523 kb on + strandat 1001.579 kb on + strandat 1001.610 kb on - strandat 1001.632 kb on + strandat 1002.088 kb on + strandat 1002.088 kb on + strandat 1002.088 kb on + strandat 1002.088 kb on + strandat 1002.098 kb on + strandat 1002.098 kb on + strandat 1002.098 kb on + strandat 1002.098 kb on + strandat 1002.098 kb on + strandat 1003.724 kb on - strandat 1003.724 kb on - strandat 1003.782 kb on + strandat 1003.797 kb on - strandat 1003.848 kb on - strandat 1003.848 kb on - strandat 1003.918 kb on + strand, within B158DRAFT_0973at 1003.918 kb on + strand, within B158DRAFT_0973at 1003.926 kb on - strand, within B158DRAFT_0973at 1003.987 kb on + strand, within B158DRAFT_0973at 1003.991 kb on + strand, within B158DRAFT_0973at 1003.991 kb on + strand, within B158DRAFT_0973at 1003.991 kb on + strand, within B158DRAFT_0973at 1003.991 kb on + strand, within B158DRAFT_0973at 1003.991 kb on + strand, within B158DRAFT_0973at 1003.999 kb on - strand, within B158DRAFT_0973at 1004.035 kb on + strand, within B158DRAFT_0973at 1004.039 kb on - strand, within B158DRAFT_0973at 1004.094 kb on + strand, within B158DRAFT_0973at 1004.094 kb on + strand, within B158DRAFT_0973at 1004.165 kb on + strand, within B158DRAFT_0973at 1004.173 kb on - strand, within B158DRAFT_0973at 1004.173 kb on - strand, within B158DRAFT_0973at 1004.173 kb on - strand, within B158DRAFT_0973at 1004.223 kb on - strand, within B158DRAFT_0973at 1004.223 kb on - strand, within B158DRAFT_0973at 1004.231 kb on + strand, within B158DRAFT_0973at 1004.231 kb on + strand, within B158DRAFT_0973at 1004.239 kb on - strand, within B158DRAFT_0973at 1004.241 kb on + strand, within B158DRAFT_0973at 1004.254 kb on - strand, within B158DRAFT_0973at 1004.310 kb on + strand, within B158DRAFT_0973at 1004.310 kb on + strand, within B158DRAFT_0973at 1004.444 kb on + strand, within B158DRAFT_0973at 1004.446 kb on + strand, within B158DRAFT_0973at 1004.454 kb on + strand, within B158DRAFT_0973at 1004.454 kb on + strand, within B158DRAFT_0973at 1004.454 kb on + strand, within B158DRAFT_0973at 1004.454 kb on - strand, within B158DRAFT_0973at 1004.462 kb on - strand, within B158DRAFT_0973at 1004.462 kb on - strand, within B158DRAFT_0973at 1004.489 kb on + strand, within B158DRAFT_0973at 1004.497 kb on - strand, within B158DRAFT_0973at 1004.505 kb on + strand, within B158DRAFT_0973at 1004.538 kb on + strand, within B158DRAFT_0973at 1004.546 kb on - strand, within B158DRAFT_0973at 1004.546 kb on - strand, within B158DRAFT_0973at 1004.546 kb on - strand, within B158DRAFT_0973at 1004.592 kb on - strand, within B158DRAFT_0973at 1004.651 kb on + strand, within B158DRAFT_0973at 1004.651 kb on + strand, within B158DRAFT_0973

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM
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1,001,474 + B158DRAFT_0969 0.86 +0.9
1,001,474 + B158DRAFT_0969 0.86 +1.9
1,001,482 - B158DRAFT_0969 0.88 -1.2
1,001,482 - B158DRAFT_0969 0.88 +1.3
1,001,487 + B158DRAFT_0969 0.89 -0.4
1,001,495 - +0.2
1,001,495 - +0.6
1,001,523 + +0.4
1,001,579 + +0.4
1,001,610 - -1.0
1,001,632 + -0.6
1,002,088 + -0.9
1,002,088 + +0.3
1,002,088 + -1.5
1,002,088 + -0.1
1,002,098 + -1.4
1,002,098 + -2.7
1,002,098 + -3.0
1,002,098 + +1.1
1,002,098 + +0.1
1,003,724 - -1.4
1,003,724 - -1.1
1,003,782 + -2.2
1,003,797 - -1.4
1,003,848 - -0.1
1,003,848 - -1.8
1,003,918 + B158DRAFT_0973 0.15 -2.0
1,003,918 + B158DRAFT_0973 0.15 -3.0
1,003,926 - B158DRAFT_0973 0.15 -0.6
1,003,987 + B158DRAFT_0973 0.20 -1.6
1,003,991 + B158DRAFT_0973 0.20 -1.9
1,003,991 + B158DRAFT_0973 0.20 -1.0
1,003,991 + B158DRAFT_0973 0.20 -1.8
1,003,991 + B158DRAFT_0973 0.20 -1.5
1,003,991 + B158DRAFT_0973 0.20 -2.5
1,003,999 - B158DRAFT_0973 0.20 -4.8
1,004,035 + B158DRAFT_0973 0.23 -2.0
1,004,039 - B158DRAFT_0973 0.23 -2.5
1,004,094 + B158DRAFT_0973 0.27 -2.2
1,004,094 + B158DRAFT_0973 0.27 +0.2
1,004,165 + B158DRAFT_0973 0.33 -2.0
1,004,173 - B158DRAFT_0973 0.33 -0.7
1,004,173 - B158DRAFT_0973 0.33 +0.3
1,004,173 - B158DRAFT_0973 0.33 -1.4
1,004,223 - B158DRAFT_0973 0.37 -0.7
1,004,223 - B158DRAFT_0973 0.37 -1.4
1,004,231 + B158DRAFT_0973 0.37 -1.6
1,004,231 + B158DRAFT_0973 0.37 -0.9
1,004,239 - B158DRAFT_0973 0.38 -2.3
1,004,241 + B158DRAFT_0973 0.38 +0.7
1,004,254 - B158DRAFT_0973 0.39 +0.2
1,004,310 + B158DRAFT_0973 0.43 -1.8
1,004,310 + B158DRAFT_0973 0.43 -2.5
1,004,444 + B158DRAFT_0973 0.53 -3.2
1,004,446 + B158DRAFT_0973 0.53 +2.3
1,004,454 + B158DRAFT_0973 0.54 +3.3
1,004,454 + B158DRAFT_0973 0.54 -2.0
1,004,454 + B158DRAFT_0973 0.54 -2.3
1,004,454 - B158DRAFT_0973 0.54 -0.4
1,004,462 - B158DRAFT_0973 0.54 -1.7
1,004,462 - B158DRAFT_0973 0.54 -1.1
1,004,489 + B158DRAFT_0973 0.56 -1.5
1,004,497 - B158DRAFT_0973 0.57 -1.0
1,004,505 + B158DRAFT_0973 0.57 -0.1
1,004,538 + B158DRAFT_0973 0.60 +0.5
1,004,546 - B158DRAFT_0973 0.60 -2.0
1,004,546 - B158DRAFT_0973 0.60 -0.8
1,004,546 - B158DRAFT_0973 0.60 +0.7
1,004,592 - B158DRAFT_0973 0.64 -2.2
1,004,651 + B158DRAFT_0973 0.68 -3.5
1,004,651 + B158DRAFT_0973 0.68 -1.6

Or see this region's nucleotide sequence