Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0718

Experiment: m.b. Chlorite 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0717 and B158DRAFT_0718 are separated by 435 nucleotidesB158DRAFT_0718 and B158DRAFT_0719 are separated by 36 nucleotides B158DRAFT_0717: B158DRAFT_0717 - glutamine synthetase, type I, at 715,362 to 716,771 _0717 B158DRAFT_0718: B158DRAFT_0718 - Outer membrane receptor proteins, mostly Fe transport, at 717,207 to 719,888 _0718 B158DRAFT_0719: B158DRAFT_0719 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 719,925 to 720,947 _0719 Position (kb) 717 718 719 720Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 716.777 kb on - strandat 716.841 kb on + strandat 716.841 kb on + strandat 716.841 kb on + strandat 716.841 kb on + strandat 716.849 kb on - strandat 716.849 kb on - strandat 716.849 kb on - strandat 716.849 kb on - strandat 717.006 kb on + strandat 717.014 kb on - strandat 717.015 kb on - strandat 717.094 kb on + strandat 717.114 kb on + strandat 718.769 kb on - strand, within B158DRAFT_0718at 719.291 kb on - strand, within B158DRAFT_0718at 720.061 kb on + strand, within B158DRAFT_0719at 720.170 kb on + strand, within B158DRAFT_0719at 720.178 kb on - strand, within B158DRAFT_0719at 720.370 kb on + strand, within B158DRAFT_0719at 720.370 kb on + strand, within B158DRAFT_0719at 720.378 kb on - strand, within B158DRAFT_0719at 720.431 kb on - strand, within B158DRAFT_0719at 720.541 kb on - strand, within B158DRAFT_0719at 720.691 kb on + strand, within B158DRAFT_0719at 720.691 kb on + strand, within B158DRAFT_0719

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM
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716,777 - +0.5
716,841 + +0.1
716,841 + +1.6
716,841 + +0.1
716,841 + +1.5
716,849 - -1.9
716,849 - +0.4
716,849 - -0.4
716,849 - +1.1
717,006 + +0.4
717,014 - +2.4
717,015 - +0.8
717,094 + +4.7
717,114 + +2.0
718,769 - B158DRAFT_0718 0.58 +3.0
719,291 - B158DRAFT_0718 0.78 +2.5
720,061 + B158DRAFT_0719 0.13 +0.2
720,170 + B158DRAFT_0719 0.24 +0.8
720,178 - B158DRAFT_0719 0.25 -1.8
720,370 + B158DRAFT_0719 0.43 +0.6
720,370 + B158DRAFT_0719 0.43 -0.7
720,378 - B158DRAFT_0719 0.44 -0.3
720,431 - B158DRAFT_0719 0.49 -1.9
720,541 - B158DRAFT_0719 0.60 -1.3
720,691 + B158DRAFT_0719 0.75 -0.1
720,691 + B158DRAFT_0719 0.75 -0.4

Or see this region's nucleotide sequence