Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0610

Experiment: m.b. Chlorite 1.25 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0609 and B158DRAFT_0610 are separated by 78 nucleotidesB158DRAFT_0610 and B158DRAFT_0611 overlap by 4 nucleotidesB158DRAFT_0611 and B158DRAFT_0612 are separated by 295 nucleotides B158DRAFT_0609: B158DRAFT_0609 - chaperone protein DnaJ, at 615,575 to 616,705 _0609 B158DRAFT_0610: B158DRAFT_0610 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 616,784 to 617,935 _0610 B158DRAFT_0611: B158DRAFT_0611 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 617,932 to 618,417 _0611 B158DRAFT_0612: B158DRAFT_0612 - putative oligopeptide transporter, OPT family, at 618,713 to 620,707 _0612 Position (kb) 616 617 618Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 615.924 kb on + strand, within B158DRAFT_0609at 615.924 kb on + strand, within B158DRAFT_0609at 615.987 kb on - strand, within B158DRAFT_0609at 616.006 kb on + strand, within B158DRAFT_0609at 616.050 kb on - strand, within B158DRAFT_0609at 616.054 kb on - strand, within B158DRAFT_0609at 616.087 kb on - strand, within B158DRAFT_0609at 616.129 kb on - strand, within B158DRAFT_0609at 616.134 kb on - strand, within B158DRAFT_0609at 616.134 kb on - strand, within B158DRAFT_0609at 616.139 kb on - strand, within B158DRAFT_0609at 616.146 kb on + strand, within B158DRAFT_0609at 616.151 kb on + strand, within B158DRAFT_0609at 616.154 kb on - strand, within B158DRAFT_0609at 616.159 kb on - strand, within B158DRAFT_0609at 616.168 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.317 kb on + strand, within B158DRAFT_0609at 616.362 kb on + strand, within B158DRAFT_0609at 616.369 kb on + strand, within B158DRAFT_0609at 616.369 kb on + strand, within B158DRAFT_0609at 616.434 kb on + strand, within B158DRAFT_0609at 616.642 kb on - strandat 616.782 kb on + strandat 616.782 kb on + strandat 616.790 kb on - strandat 618.631 kb on - strandat 618.687 kb on + strandat 618.754 kb on - strandat 618.774 kb on + strandat 618.774 kb on + strandat 618.774 kb on + strandat 618.774 kb on + strandat 618.782 kb on - strandat 618.869 kb on + strandat 618.891 kb on + strandat 618.891 kb on + strandat 618.896 kb on + strandat 618.899 kb on - strandat 618.899 kb on - strandat 618.899 kb on - strandat 618.904 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM
remove
615,924 + B158DRAFT_0609 0.31 +4.8
615,924 + B158DRAFT_0609 0.31 +0.8
615,987 - B158DRAFT_0609 0.36 +3.7
616,006 + B158DRAFT_0609 0.38 +0.7
616,050 - B158DRAFT_0609 0.42 +2.3
616,054 - B158DRAFT_0609 0.42 +3.6
616,087 - B158DRAFT_0609 0.45 +3.6
616,129 - B158DRAFT_0609 0.49 +4.0
616,134 - B158DRAFT_0609 0.49 +3.2
616,134 - B158DRAFT_0609 0.49 +2.9
616,139 - B158DRAFT_0609 0.50 +4.7
616,146 + B158DRAFT_0609 0.50 +3.7
616,151 + B158DRAFT_0609 0.51 +3.3
616,154 - B158DRAFT_0609 0.51 +1.8
616,159 - B158DRAFT_0609 0.52 +3.5
616,168 + B158DRAFT_0609 0.52 +0.2
616,187 + B158DRAFT_0609 0.54 +3.1
616,187 + B158DRAFT_0609 0.54 +4.1
616,187 + B158DRAFT_0609 0.54 +4.3
616,187 + B158DRAFT_0609 0.54 +2.9
616,187 + B158DRAFT_0609 0.54 +3.5
616,187 + B158DRAFT_0609 0.54 +3.0
616,195 - B158DRAFT_0609 0.55 +2.8
616,195 - B158DRAFT_0609 0.55 +0.7
616,195 - B158DRAFT_0609 0.55 +1.4
616,195 - B158DRAFT_0609 0.55 +1.8
616,195 - B158DRAFT_0609 0.55 +0.6
616,317 + B158DRAFT_0609 0.66 -2.0
616,362 + B158DRAFT_0609 0.70 +1.2
616,369 + B158DRAFT_0609 0.70 -1.6
616,369 + B158DRAFT_0609 0.70 +0.1
616,434 + B158DRAFT_0609 0.76 +0.1
616,642 - -1.0
616,782 + -0.5
616,782 + -0.9
616,790 - -2.0
618,631 - +0.7
618,687 + -2.5
618,754 - -1.0
618,774 + -1.0
618,774 + +0.0
618,774 + -1.2
618,774 + -1.1
618,782 - -1.9
618,869 + -1.5
618,891 + +1.0
618,891 + -1.2
618,896 + +1.1
618,899 - -1.4
618,899 - -0.7
618,899 - -0.1
618,904 - -1.5

Or see this region's nucleotide sequence