Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0439

Experiment: m.b. Chlorite 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0438 and B158DRAFT_0439 are separated by 324 nucleotidesB158DRAFT_0439 and B158DRAFT_0440 are separated by 204 nucleotides B158DRAFT_0438: B158DRAFT_0438 - alternative sigma factor RpoH, at 440,289 to 441,140 _0438 B158DRAFT_0439: B158DRAFT_0439 - Uncharacterized conserved protein, at 441,465 to 442,037 _0439 B158DRAFT_0440: B158DRAFT_0440 - Cell division protein, at 442,242 to 443,210 _0440 Position (kb) 441 442 443Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 441.131 kb on - strandat 441.164 kb on - strandat 441.182 kb on + strandat 441.182 kb on + strandat 441.182 kb on + strandat 441.182 kb on + strandat 441.190 kb on - strandat 441.190 kb on - strandat 441.190 kb on - strandat 441.190 kb on - strandat 441.190 kb on - strandat 441.190 kb on - strandat 441.317 kb on + strandat 441.317 kb on + strandat 441.317 kb on + strandat 441.330 kb on - strandat 441.368 kb on - strandat 441.368 kb on - strandat 441.368 kb on - strandat 441.406 kb on + strandat 441.406 kb on + strandat 441.495 kb on + strandat 441.503 kb on + strandat 441.526 kb on + strand, within B158DRAFT_0439at 441.534 kb on - strand, within B158DRAFT_0439at 441.606 kb on + strand, within B158DRAFT_0439at 441.614 kb on - strand, within B158DRAFT_0439at 441.652 kb on - strand, within B158DRAFT_0439at 441.663 kb on + strand, within B158DRAFT_0439at 441.681 kb on - strand, within B158DRAFT_0439at 441.902 kb on + strand, within B158DRAFT_0439at 441.902 kb on + strand, within B158DRAFT_0439at 441.983 kb on + strandat 442.021 kb on - strandat 442.062 kb on + strandat 442.177 kb on - strandat 442.234 kb on + strandat 442.256 kb on - strandat 442.258 kb on + strandat 442.258 kb on + strandat 442.258 kb on + strandat 442.258 kb on + strandat 442.266 kb on - strandat 442.289 kb on - strandat 442.311 kb on + strandat 442.371 kb on + strand, within B158DRAFT_0440at 442.371 kb on + strand, within B158DRAFT_0440at 442.377 kb on - strand, within B158DRAFT_0440at 442.379 kb on - strand, within B158DRAFT_0440at 442.388 kb on + strand, within B158DRAFT_0440at 442.396 kb on - strand, within B158DRAFT_0440at 442.396 kb on - strand, within B158DRAFT_0440at 442.396 kb on - strand, within B158DRAFT_0440at 442.443 kb on + strand, within B158DRAFT_0440at 442.455 kb on + strand, within B158DRAFT_0440at 442.511 kb on - strand, within B158DRAFT_0440at 442.513 kb on + strand, within B158DRAFT_0440at 442.551 kb on + strand, within B158DRAFT_0440at 442.551 kb on + strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.775 kb on + strand, within B158DRAFT_0440at 442.775 kb on + strand, within B158DRAFT_0440at 442.775 kb on + strand, within B158DRAFT_0440at 442.783 kb on - strand, within B158DRAFT_0440at 442.808 kb on + strand, within B158DRAFT_0440at 442.812 kb on + strand, within B158DRAFT_0440at 442.820 kb on - strand, within B158DRAFT_0440at 442.850 kb on + strand, within B158DRAFT_0440at 442.885 kb on + strand, within B158DRAFT_0440at 442.953 kb on - strand, within B158DRAFT_0440at 443.037 kb on + strand, within B158DRAFT_0440

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM
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441,131 - -0.5
441,164 - +0.6
441,182 + -0.9
441,182 + +0.3
441,182 + +0.0
441,182 + -0.2
441,190 - +0.2
441,190 - +0.0
441,190 - -1.7
441,190 - -0.3
441,190 - -1.0
441,190 - +2.7
441,317 + +0.4
441,317 + -1.3
441,317 + -0.6
441,330 - -0.8
441,368 - -2.0
441,368 - -2.2
441,368 - +0.9
441,406 + -1.5
441,406 + -0.1
441,495 + -1.5
441,503 + +0.2
441,526 + B158DRAFT_0439 0.11 +0.4
441,534 - B158DRAFT_0439 0.12 -0.5
441,606 + B158DRAFT_0439 0.25 +0.6
441,614 - B158DRAFT_0439 0.26 -0.4
441,652 - B158DRAFT_0439 0.33 +0.3
441,663 + B158DRAFT_0439 0.35 +0.5
441,681 - B158DRAFT_0439 0.38 -0.7
441,902 + B158DRAFT_0439 0.76 +1.6
441,902 + B158DRAFT_0439 0.76 -1.5
441,983 + +0.9
442,021 - +0.1
442,062 + +0.4
442,177 - -0.7
442,234 + -0.8
442,256 - +3.8
442,258 + +3.2
442,258 + -0.8
442,258 + +2.9
442,258 + +1.6
442,266 - -1.1
442,289 - +4.2
442,311 + +4.3
442,371 + B158DRAFT_0440 0.13 +3.7
442,371 + B158DRAFT_0440 0.13 +4.1
442,377 - B158DRAFT_0440 0.14 +4.0
442,379 - B158DRAFT_0440 0.14 +4.2
442,388 + B158DRAFT_0440 0.15 +2.6
442,396 - B158DRAFT_0440 0.16 +4.2
442,396 - B158DRAFT_0440 0.16 +2.9
442,396 - B158DRAFT_0440 0.16 +3.9
442,443 + B158DRAFT_0440 0.21 +4.2
442,455 + B158DRAFT_0440 0.22 +1.4
442,511 - B158DRAFT_0440 0.28 +3.9
442,513 + B158DRAFT_0440 0.28 +2.0
442,551 + B158DRAFT_0440 0.32 +3.6
442,551 + B158DRAFT_0440 0.32 +4.8
442,559 - B158DRAFT_0440 0.33 +4.4
442,559 - B158DRAFT_0440 0.33 +4.0
442,559 - B158DRAFT_0440 0.33 +4.3
442,559 - B158DRAFT_0440 0.33 +3.8
442,775 + B158DRAFT_0440 0.55 +3.8
442,775 + B158DRAFT_0440 0.55 +2.8
442,775 + B158DRAFT_0440 0.55 +3.7
442,783 - B158DRAFT_0440 0.56 +4.6
442,808 + B158DRAFT_0440 0.58 +3.0
442,812 + B158DRAFT_0440 0.59 +3.9
442,820 - B158DRAFT_0440 0.60 +2.3
442,850 + B158DRAFT_0440 0.63 +2.9
442,885 + B158DRAFT_0440 0.66 +1.3
442,953 - B158DRAFT_0440 0.73 +3.8
443,037 + B158DRAFT_0440 0.82 +3.0

Or see this region's nucleotide sequence