Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0326

Experiment: m.b. Chlorite 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0325 and B158DRAFT_0326 are separated by 338 nucleotidesB158DRAFT_0326 and B158DRAFT_0327 are separated by 34 nucleotidesB158DRAFT_0327 and B158DRAFT_0328 are separated by 109 nucleotidesB158DRAFT_0328 and B158DRAFT_0329 are separated by 26 nucleotides B158DRAFT_0325: B158DRAFT_0325 - transcriptional regulator, LytTR family, at 329,535 to 330,401 _0325 B158DRAFT_0326: B158DRAFT_0326 - Outer membrane protein V, at 330,740 to 331,567 _0326 B158DRAFT_0327: B158DRAFT_0327 - hypothetical protein, at 331,602 to 331,895 _0327 B158DRAFT_0328: B158DRAFT_0328 - hypothetical protein, at 332,005 to 332,334 _0328 B158DRAFT_0329: B158DRAFT_0329 - Glutathione S-transferase, at 332,361 to 332,990 _0329 Position (kb) 330 331 332Strain fitness (log2 ratio) -2 -1 0 1at 330.083 kb on - strand, within B158DRAFT_0325at 330.138 kb on - strand, within B158DRAFT_0325at 330.228 kb on - strand, within B158DRAFT_0325at 330.228 kb on - strand, within B158DRAFT_0325at 330.256 kb on + strand, within B158DRAFT_0325at 330.279 kb on - strand, within B158DRAFT_0325at 330.341 kb on - strandat 330.435 kb on - strandat 330.505 kb on + strandat 330.808 kb on - strandat 331.058 kb on + strand, within B158DRAFT_0326at 331.058 kb on + strand, within B158DRAFT_0326at 331.066 kb on - strand, within B158DRAFT_0326at 331.066 kb on - strand, within B158DRAFT_0326at 331.066 kb on - strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.360 kb on - strand, within B158DRAFT_0326at 332.110 kb on + strand, within B158DRAFT_0328at 332.118 kb on - strand, within B158DRAFT_0328at 332.207 kb on - strand, within B158DRAFT_0328at 332.499 kb on + strand, within B158DRAFT_0329at 332.499 kb on + strand, within B158DRAFT_0329at 332.501 kb on - strand, within B158DRAFT_0329at 332.501 kb on - strand, within B158DRAFT_0329at 332.507 kb on - strand, within B158DRAFT_0329

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 1.25 mM
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330,083 - B158DRAFT_0325 0.63 -1.5
330,138 - B158DRAFT_0325 0.70 -0.4
330,228 - B158DRAFT_0325 0.80 -1.2
330,228 - B158DRAFT_0325 0.80 -2.0
330,256 + B158DRAFT_0325 0.83 -1.7
330,279 - B158DRAFT_0325 0.86 +1.5
330,341 - -0.5
330,435 - -2.0
330,505 + +0.2
330,808 - -1.5
331,058 + B158DRAFT_0326 0.38 -2.5
331,058 + B158DRAFT_0326 0.38 +1.0
331,066 - B158DRAFT_0326 0.39 -0.1
331,066 - B158DRAFT_0326 0.39 -1.9
331,066 - B158DRAFT_0326 0.39 -0.2
331,347 + B158DRAFT_0326 0.73 -1.7
331,347 + B158DRAFT_0326 0.73 -0.5
331,347 + B158DRAFT_0326 0.73 -2.0
331,347 + B158DRAFT_0326 0.73 -1.5
331,347 + B158DRAFT_0326 0.73 +0.5
331,355 - B158DRAFT_0326 0.74 -0.4
331,355 - B158DRAFT_0326 0.74 -0.5
331,355 - B158DRAFT_0326 0.74 +0.8
331,355 - B158DRAFT_0326 0.74 +0.6
331,355 - B158DRAFT_0326 0.74 -1.2
331,355 - B158DRAFT_0326 0.74 -0.3
331,355 - B158DRAFT_0326 0.74 -2.2
331,355 - B158DRAFT_0326 0.74 -1.4
331,355 - B158DRAFT_0326 0.74 -0.2
331,355 - B158DRAFT_0326 0.74 -1.0
331,355 - B158DRAFT_0326 0.74 -0.6
331,355 - B158DRAFT_0326 0.74 -2.1
331,360 - B158DRAFT_0326 0.75 -2.7
332,110 + B158DRAFT_0328 0.32 +0.0
332,118 - B158DRAFT_0328 0.34 +0.9
332,207 - B158DRAFT_0328 0.61 +0.4
332,499 + B158DRAFT_0329 0.22 -0.8
332,499 + B158DRAFT_0329 0.22 -1.5
332,501 - B158DRAFT_0329 0.22 -0.2
332,501 - B158DRAFT_0329 0.22 -0.2
332,507 - B158DRAFT_0329 0.23 -1.9

Or see this region's nucleotide sequence