Experiment: m.b. Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2205 and B158DRAFT_2206 are separated by 201 nucleotides B158DRAFT_2206 and B158DRAFT_2207 are separated by 29 nucleotides B158DRAFT_2207 and B158DRAFT_2208 are separated by 379 nucleotides
B158DRAFT_2205: B158DRAFT_2205 - hypothetical protein, at 349,396 to 351,474
_2205
B158DRAFT_2206: B158DRAFT_2206 - DNA-binding winged-HTH domains, at 351,676 to 353,898
_2206
B158DRAFT_2207: B158DRAFT_2207 - hypothetical protein, at 353,928 to 354,125
_2207
B158DRAFT_2208: B158DRAFT_2208 - transcriptional regulator, GntR family, at 354,505 to 355,227
_2208
Position (kb) 351
352
353
354 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 350.702 kb on - strand, within B158DRAFT_2205 at 350.702 kb on - strand, within B158DRAFT_2205 at 350.725 kb on - strand, within B158DRAFT_2205 at 350.754 kb on + strand, within B158DRAFT_2205 at 350.778 kb on - strand, within B158DRAFT_2205 at 350.798 kb on - strand, within B158DRAFT_2205 at 350.798 kb on - strand, within B158DRAFT_2205 at 350.798 kb on - strand, within B158DRAFT_2205 at 350.867 kb on + strand, within B158DRAFT_2205 at 350.877 kb on - strand, within B158DRAFT_2205 at 350.941 kb on + strand, within B158DRAFT_2205 at 350.951 kb on + strand, within B158DRAFT_2205 at 350.951 kb on + strand, within B158DRAFT_2205 at 350.951 kb on + strand, within B158DRAFT_2205 at 350.958 kb on + strand, within B158DRAFT_2205 at 350.958 kb on + strand, within B158DRAFT_2205 at 350.958 kb on + strand, within B158DRAFT_2205 at 350.959 kb on - strand, within B158DRAFT_2205 at 350.966 kb on - strand, within B158DRAFT_2205 at 350.966 kb on - strand, within B158DRAFT_2205 at 350.966 kb on - strand, within B158DRAFT_2205 at 351.024 kb on - strand, within B158DRAFT_2205 at 351.071 kb on + strand, within B158DRAFT_2205 at 351.079 kb on + strand, within B158DRAFT_2205 at 351.100 kb on + strand, within B158DRAFT_2205 at 351.153 kb on + strand, within B158DRAFT_2205 at 351.156 kb on + strand, within B158DRAFT_2205 at 351.181 kb on + strand, within B158DRAFT_2205 at 351.186 kb on + strand, within B158DRAFT_2205 at 351.189 kb on - strand, within B158DRAFT_2205 at 351.189 kb on - strand, within B158DRAFT_2205 at 351.189 kb on - strand, within B158DRAFT_2205 at 351.189 kb on - strand, within B158DRAFT_2205 at 351.211 kb on + strand, within B158DRAFT_2205 at 351.211 kb on + strand, within B158DRAFT_2205 at 351.211 kb on + strand, within B158DRAFT_2205 at 351.219 kb on - strand, within B158DRAFT_2205 at 351.219 kb on - strand, within B158DRAFT_2205 at 351.227 kb on - strand, within B158DRAFT_2205 at 351.259 kb on - strand, within B158DRAFT_2205 at 351.265 kb on + strand, within B158DRAFT_2205 at 351.289 kb on - strand at 351.290 kb on - strand at 351.339 kb on + strand at 351.366 kb on - strand at 351.493 kb on - strand at 351.501 kb on + strand at 351.539 kb on - strand at 351.666 kb on + strand at 351.666 kb on + strand at 351.666 kb on + strand at 351.666 kb on + strand at 351.666 kb on + strand at 351.666 kb on + strand at 351.674 kb on - strand at 351.674 kb on - strand at 351.674 kb on - strand at 351.674 kb on - strand at 351.750 kb on + strand at 351.750 kb on + strand at 351.758 kb on - strand at 351.763 kb on - strand at 351.770 kb on - strand at 351.770 kb on - strand at 351.799 kb on + strand at 351.799 kb on + strand at 351.801 kb on + strand at 351.855 kb on + strand at 351.875 kb on - strand at 351.963 kb on + strand, within B158DRAFT_2206 at 352.015 kb on + strand, within B158DRAFT_2206 at 352.023 kb on - strand, within B158DRAFT_2206 at 352.023 kb on - strand, within B158DRAFT_2206 at 352.084 kb on + strand, within B158DRAFT_2206 at 352.092 kb on - strand, within B158DRAFT_2206 at 352.096 kb on + strand, within B158DRAFT_2206 at 352.122 kb on + strand, within B158DRAFT_2206 at 352.338 kb on - strand, within B158DRAFT_2206 at 352.438 kb on - strand, within B158DRAFT_2206 at 352.483 kb on + strand, within B158DRAFT_2206 at 352.520 kb on - strand, within B158DRAFT_2206 at 352.580 kb on + strand, within B158DRAFT_2206 at 352.580 kb on - strand, within B158DRAFT_2206 at 352.580 kb on - strand, within B158DRAFT_2206 at 352.588 kb on - strand, within B158DRAFT_2206 at 352.622 kb on - strand, within B158DRAFT_2206 at 352.622 kb on - strand, within B158DRAFT_2206 at 352.711 kb on - strand, within B158DRAFT_2206 at 352.711 kb on - strand, within B158DRAFT_2206 at 352.711 kb on - strand, within B158DRAFT_2206 at 352.745 kb on - strand, within B158DRAFT_2206 at 352.747 kb on + strand, within B158DRAFT_2206 at 352.783 kb on - strand, within B158DRAFT_2206 at 352.898 kb on + strand, within B158DRAFT_2206 at 352.906 kb on - strand, within B158DRAFT_2206 at 352.906 kb on - strand, within B158DRAFT_2206 at 352.906 kb on - strand, within B158DRAFT_2206 at 352.910 kb on + strand, within B158DRAFT_2206 at 352.918 kb on - strand, within B158DRAFT_2206 at 353.014 kb on + strand, within B158DRAFT_2206 at 353.014 kb on + strand, within B158DRAFT_2206 at 353.073 kb on - strand, within B158DRAFT_2206 at 353.119 kb on + strand, within B158DRAFT_2206 at 353.204 kb on + strand, within B158DRAFT_2206 at 353.212 kb on - strand, within B158DRAFT_2206 at 353.212 kb on - strand, within B158DRAFT_2206 at 353.212 kb on - strand, within B158DRAFT_2206 at 353.215 kb on + strand, within B158DRAFT_2206 at 353.215 kb on + strand, within B158DRAFT_2206 at 353.215 kb on + strand, within B158DRAFT_2206 at 353.223 kb on - strand, within B158DRAFT_2206 at 353.223 kb on - strand, within B158DRAFT_2206 at 353.311 kb on - strand, within B158DRAFT_2206 at 353.313 kb on - strand, within B158DRAFT_2206 at 353.313 kb on - strand, within B158DRAFT_2206 at 353.421 kb on + strand, within B158DRAFT_2206 at 353.456 kb on + strand, within B158DRAFT_2206 at 353.542 kb on - strand, within B158DRAFT_2206 at 353.598 kb on + strand, within B158DRAFT_2206 at 353.606 kb on - strand, within B158DRAFT_2206 at 353.606 kb on - strand, within B158DRAFT_2206 at 353.619 kb on - strand, within B158DRAFT_2206 at 353.642 kb on - strand, within B158DRAFT_2206 at 353.663 kb on + strand, within B158DRAFT_2206 at 353.671 kb on - strand, within B158DRAFT_2206 at 353.677 kb on + strand at 353.679 kb on - strand at 353.687 kb on + strand at 353.687 kb on + strand at 353.687 kb on + strand at 353.695 kb on - strand at 353.739 kb on + strand at 353.753 kb on + strand at 353.777 kb on - strand at 353.812 kb on - strand at 353.892 kb on + strand at 353.892 kb on + strand at 353.892 kb on + strand at 353.900 kb on - strand at 353.900 kb on - strand at 353.900 kb on - strand at 353.915 kb on - strand at 353.915 kb on - strand at 353.963 kb on + strand, within B158DRAFT_2207 at 353.975 kb on + strand, within B158DRAFT_2207 at 353.975 kb on + strand, within B158DRAFT_2207 at 353.983 kb on - strand, within B158DRAFT_2207 at 353.983 kb on - strand, within B158DRAFT_2207 at 354.014 kb on + strand, within B158DRAFT_2207 at 354.024 kb on + strand, within B158DRAFT_2207 at 354.034 kb on + strand, within B158DRAFT_2207 at 354.097 kb on + strand, within B158DRAFT_2207 at 354.187 kb on + strand at 354.205 kb on + strand at 354.213 kb on - strand at 354.278 kb on + strand at 354.283 kb on + strand at 354.291 kb on - strand at 354.291 kb on - strand at 354.313 kb on + strand at 354.336 kb on + strand at 354.336 kb on + strand at 354.336 kb on + strand at 354.339 kb on - strand at 354.344 kb on - strand at 354.504 kb on - strand at 354.515 kb on - strand at 354.531 kb on - strand at 354.746 kb on + strand, within B158DRAFT_2208 at 354.754 kb on - strand, within B158DRAFT_2208 at 354.764 kb on - strand, within B158DRAFT_2208 at 354.799 kb on - strand, within B158DRAFT_2208 at 354.819 kb on + strand, within B158DRAFT_2208
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM remove 350,702 - B158DRAFT_2205 0.63 -1.7 350,702 - B158DRAFT_2205 0.63 -1.5 350,725 - B158DRAFT_2205 0.64 -1.2 350,754 + B158DRAFT_2205 0.65 -1.1 350,778 - B158DRAFT_2205 0.66 +0.2 350,798 - B158DRAFT_2205 0.67 -2.1 350,798 - B158DRAFT_2205 0.67 -2.5 350,798 - B158DRAFT_2205 0.67 +1.6 350,867 + B158DRAFT_2205 0.71 -0.1 350,877 - B158DRAFT_2205 0.71 -0.4 350,941 + B158DRAFT_2205 0.74 -2.0 350,951 + B158DRAFT_2205 0.75 -0.2 350,951 + B158DRAFT_2205 0.75 -2.7 350,951 + B158DRAFT_2205 0.75 +1.4 350,958 + B158DRAFT_2205 0.75 -0.8 350,958 + B158DRAFT_2205 0.75 -0.3 350,958 + B158DRAFT_2205 0.75 +0.1 350,959 - B158DRAFT_2205 0.75 -0.5 350,966 - B158DRAFT_2205 0.76 +0.6 350,966 - B158DRAFT_2205 0.76 -0.4 350,966 - B158DRAFT_2205 0.76 -0.1 351,024 - B158DRAFT_2205 0.78 +0.2 351,071 + B158DRAFT_2205 0.81 -1.5 351,079 + B158DRAFT_2205 0.81 -0.5 351,100 + B158DRAFT_2205 0.82 -0.3 351,153 + B158DRAFT_2205 0.85 +5.9 351,156 + B158DRAFT_2205 0.85 +1.1 351,181 + B158DRAFT_2205 0.86 +0.7 351,186 + B158DRAFT_2205 0.86 +1.4 351,189 - B158DRAFT_2205 0.86 -1.6 351,189 - B158DRAFT_2205 0.86 -1.6 351,189 - B158DRAFT_2205 0.86 +2.6 351,189 - B158DRAFT_2205 0.86 +3.5 351,211 + B158DRAFT_2205 0.87 +0.2 351,211 + B158DRAFT_2205 0.87 -1.2 351,211 + B158DRAFT_2205 0.87 +0.1 351,219 - B158DRAFT_2205 0.88 -1.5 351,219 - B158DRAFT_2205 0.88 -0.8 351,227 - B158DRAFT_2205 0.88 +0.4 351,259 - B158DRAFT_2205 0.90 +0.0 351,265 + B158DRAFT_2205 0.90 -0.1 351,289 - -0.2 351,290 - -1.4 351,339 + -1.6 351,366 - +0.1 351,493 - -0.4 351,501 + -0.5 351,539 - -0.2 351,666 + -0.9 351,666 + -0.8 351,666 + -1.4 351,666 + +1.4 351,666 + -0.2 351,666 + -1.2 351,674 - +0.8 351,674 - -0.0 351,674 - -2.2 351,674 - -1.1 351,750 + -1.2 351,750 + -0.3 351,758 - -0.4 351,763 - +0.7 351,770 - +0.2 351,770 - -0.7 351,799 + -1.8 351,799 + +0.3 351,801 + -0.1 351,855 + -0.4 351,875 - -1.1 351,963 + B158DRAFT_2206 0.13 +0.8 352,015 + B158DRAFT_2206 0.15 -2.6 352,023 - B158DRAFT_2206 0.16 -1.0 352,023 - B158DRAFT_2206 0.16 -0.5 352,084 + B158DRAFT_2206 0.18 -0.8 352,092 - B158DRAFT_2206 0.19 +1.3 352,096 + B158DRAFT_2206 0.19 -1.1 352,122 + B158DRAFT_2206 0.20 -2.1 352,338 - B158DRAFT_2206 0.30 +0.4 352,438 - B158DRAFT_2206 0.34 +0.4 352,483 + B158DRAFT_2206 0.36 -0.5 352,520 - B158DRAFT_2206 0.38 -0.2 352,580 + B158DRAFT_2206 0.41 +1.9 352,580 - B158DRAFT_2206 0.41 -0.9 352,580 - B158DRAFT_2206 0.41 -0.6 352,588 - B158DRAFT_2206 0.41 -0.8 352,622 - B158DRAFT_2206 0.43 +0.1 352,622 - B158DRAFT_2206 0.43 +0.4 352,711 - B158DRAFT_2206 0.47 -0.4 352,711 - B158DRAFT_2206 0.47 -2.5 352,711 - B158DRAFT_2206 0.47 +1.2 352,745 - B158DRAFT_2206 0.48 -1.1 352,747 + B158DRAFT_2206 0.48 +0.3 352,783 - B158DRAFT_2206 0.50 -0.6 352,898 + B158DRAFT_2206 0.55 -0.7 352,906 - B158DRAFT_2206 0.55 -1.6 352,906 - B158DRAFT_2206 0.55 -0.5 352,906 - B158DRAFT_2206 0.55 +0.5 352,910 + B158DRAFT_2206 0.56 -0.6 352,918 - B158DRAFT_2206 0.56 -1.4 353,014 + B158DRAFT_2206 0.60 -0.8 353,014 + B158DRAFT_2206 0.60 -0.1 353,073 - B158DRAFT_2206 0.63 -0.7 353,119 + B158DRAFT_2206 0.65 +0.5 353,204 + B158DRAFT_2206 0.69 -0.4 353,212 - B158DRAFT_2206 0.69 -0.3 353,212 - B158DRAFT_2206 0.69 -0.8 353,212 - B158DRAFT_2206 0.69 +0.4 353,215 + B158DRAFT_2206 0.69 -0.5 353,215 + B158DRAFT_2206 0.69 +2.6 353,215 + B158DRAFT_2206 0.69 -0.9 353,223 - B158DRAFT_2206 0.70 -0.3 353,223 - B158DRAFT_2206 0.70 -0.7 353,311 - B158DRAFT_2206 0.74 +0.1 353,313 - B158DRAFT_2206 0.74 -2.1 353,313 - B158DRAFT_2206 0.74 -0.8 353,421 + B158DRAFT_2206 0.78 +0.8 353,456 + B158DRAFT_2206 0.80 -0.4 353,542 - B158DRAFT_2206 0.84 -0.9 353,598 + B158DRAFT_2206 0.86 -0.5 353,606 - B158DRAFT_2206 0.87 -2.0 353,606 - B158DRAFT_2206 0.87 +1.9 353,619 - B158DRAFT_2206 0.87 -0.4 353,642 - B158DRAFT_2206 0.88 -1.0 353,663 + B158DRAFT_2206 0.89 -0.2 353,671 - B158DRAFT_2206 0.90 -1.0 353,677 + -1.2 353,679 - -0.6 353,687 + +0.2 353,687 + -0.6 353,687 + -0.9 353,695 - +1.0 353,739 + +0.9 353,753 + -1.3 353,777 - -0.0 353,812 - -0.7 353,892 + -0.9 353,892 + +0.9 353,892 + -0.2 353,900 - -0.4 353,900 - -0.1 353,900 - -0.6 353,915 - +0.3 353,915 - -1.8 353,963 + B158DRAFT_2207 0.18 -0.2 353,975 + B158DRAFT_2207 0.24 -1.1 353,975 + B158DRAFT_2207 0.24 +0.7 353,983 - B158DRAFT_2207 0.28 +0.5 353,983 - B158DRAFT_2207 0.28 -1.6 354,014 + B158DRAFT_2207 0.43 -0.0 354,024 + B158DRAFT_2207 0.48 +0.7 354,034 + B158DRAFT_2207 0.54 -0.1 354,097 + B158DRAFT_2207 0.85 -0.4 354,187 + +1.3 354,205 + -1.5 354,213 - -1.0 354,278 + -0.8 354,283 + +0.7 354,291 - -1.7 354,291 - +0.4 354,313 + -0.6 354,336 + +0.3 354,336 + -1.1 354,336 + -0.3 354,339 - -0.5 354,344 - -1.3 354,504 - -2.2 354,515 - -2.4 354,531 - +2.1 354,746 + B158DRAFT_2208 0.33 -1.1 354,754 - B158DRAFT_2208 0.34 -2.7 354,764 - B158DRAFT_2208 0.36 -2.4 354,799 - B158DRAFT_2208 0.41 -0.4 354,819 + B158DRAFT_2208 0.43 -0.9
Or see this region's nucleotide sequence