Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1924

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1922 and B158DRAFT_1923 are separated by 117 nucleotidesB158DRAFT_1923 and B158DRAFT_1924 are separated by 93 nucleotidesB158DRAFT_1924 and B158DRAFT_1925 are separated by 49 nucleotides B158DRAFT_1922: B158DRAFT_1922 - Uncharacterized protein involved in outer membrane biogenesis, at 57,727 to 59,574 _1922 B158DRAFT_1923: B158DRAFT_1923 - hypothetical protein, at 59,692 to 60,450 _1923 B158DRAFT_1924: B158DRAFT_1924 - Methyltransferase domain., at 60,544 to 61,176 _1924 B158DRAFT_1925: B158DRAFT_1925 - ATPase components of ABC transporters with duplicated ATPase domains, at 61,226 to 63,136 _1925 Position (kb) 60 61 62Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 59.573 kb on - strandat 59.630 kb on + strandat 59.638 kb on - strandat 59.638 kb on - strandat 59.783 kb on + strand, within B158DRAFT_1923at 59.783 kb on + strand, within B158DRAFT_1923at 59.783 kb on + strand, within B158DRAFT_1923at 59.804 kb on + strand, within B158DRAFT_1923at 60.002 kb on - strand, within B158DRAFT_1923at 60.049 kb on - strand, within B158DRAFT_1923at 60.149 kb on + strand, within B158DRAFT_1923at 60.215 kb on - strand, within B158DRAFT_1923at 60.224 kb on + strand, within B158DRAFT_1923at 60.377 kb on + strandat 60.381 kb on + strandat 60.466 kb on + strandat 60.466 kb on + strandat 60.466 kb on + strandat 60.474 kb on - strandat 60.474 kb on - strandat 60.474 kb on - strandat 60.474 kb on - strandat 60.542 kb on + strandat 60.542 kb on + strandat 60.550 kb on - strandat 60.623 kb on - strand, within B158DRAFT_1924at 60.721 kb on + strand, within B158DRAFT_1924at 60.731 kb on + strand, within B158DRAFT_1924at 60.739 kb on - strand, within B158DRAFT_1924at 60.863 kb on - strand, within B158DRAFT_1924at 60.912 kb on - strand, within B158DRAFT_1924at 60.990 kb on - strand, within B158DRAFT_1924at 61.018 kb on + strand, within B158DRAFT_1924at 61.050 kb on + strand, within B158DRAFT_1924at 61.109 kb on + strand, within B158DRAFT_1924at 61.117 kb on - strandat 61.153 kb on - strandat 61.166 kb on + strandat 61.172 kb on - strandat 61.172 kb on - strandat 61.174 kb on - strandat 61.179 kb on - strandat 61.269 kb on + strandat 61.269 kb on + strandat 61.269 kb on + strandat 61.269 kb on + strandat 61.269 kb on + strandat 61.269 kb on + strandat 61.269 kb on + strandat 61.274 kb on + strandat 61.274 kb on + strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.277 kb on - strandat 61.282 kb on - strandat 61.287 kb on - strandat 61.418 kb on + strand, within B158DRAFT_1925at 61.438 kb on + strand, within B158DRAFT_1925at 61.462 kb on + strand, within B158DRAFT_1925at 61.502 kb on - strand, within B158DRAFT_1925at 61.511 kb on + strand, within B158DRAFT_1925at 61.519 kb on - strand, within B158DRAFT_1925at 61.541 kb on - strand, within B158DRAFT_1925at 61.573 kb on + strand, within B158DRAFT_1925at 61.573 kb on + strand, within B158DRAFT_1925at 61.573 kb on + strand, within B158DRAFT_1925at 61.581 kb on - strand, within B158DRAFT_1925at 61.581 kb on - strand, within B158DRAFT_1925at 61.581 kb on - strand, within B158DRAFT_1925at 61.581 kb on - strand, within B158DRAFT_1925at 61.581 kb on - strand, within B158DRAFT_1925at 61.611 kb on + strand, within B158DRAFT_1925at 61.692 kb on - strand, within B158DRAFT_1925at 61.692 kb on - strand, within B158DRAFT_1925at 61.714 kb on - strand, within B158DRAFT_1925at 61.720 kb on + strand, within B158DRAFT_1925at 61.722 kb on - strand, within B158DRAFT_1925at 61.817 kb on + strand, within B158DRAFT_1925at 61.825 kb on - strand, within B158DRAFT_1925at 61.949 kb on + strand, within B158DRAFT_1925at 62.015 kb on + strand, within B158DRAFT_1925at 62.037 kb on - strand, within B158DRAFT_1925at 62.037 kb on - strand, within B158DRAFT_1925at 62.074 kb on + strand, within B158DRAFT_1925at 62.074 kb on + strand, within B158DRAFT_1925at 62.082 kb on - strand, within B158DRAFT_1925at 62.087 kb on + strand, within B158DRAFT_1925at 62.106 kb on + strand, within B158DRAFT_1925at 62.114 kb on - strand, within B158DRAFT_1925at 62.114 kb on - strand, within B158DRAFT_1925

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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59,573 - -1.6
59,630 + -0.4
59,638 - -0.1
59,638 - -0.1
59,783 + B158DRAFT_1923 0.12 +0.4
59,783 + B158DRAFT_1923 0.12 -2.0
59,783 + B158DRAFT_1923 0.12 -3.3
59,804 + B158DRAFT_1923 0.15 -0.1
60,002 - B158DRAFT_1923 0.41 -0.4
60,049 - B158DRAFT_1923 0.47 +2.7
60,149 + B158DRAFT_1923 0.60 +1.7
60,215 - B158DRAFT_1923 0.69 +1.7
60,224 + B158DRAFT_1923 0.70 -0.8
60,377 + -1.2
60,381 + -1.2
60,466 + -0.4
60,466 + -0.2
60,466 + -1.0
60,474 - -0.6
60,474 - -0.2
60,474 - -0.5
60,474 - -0.6
60,542 + -1.4
60,542 + +0.1
60,550 - -0.7
60,623 - B158DRAFT_1924 0.12 -2.8
60,721 + B158DRAFT_1924 0.28 -1.9
60,731 + B158DRAFT_1924 0.30 -0.1
60,739 - B158DRAFT_1924 0.31 +0.8
60,863 - B158DRAFT_1924 0.50 -2.0
60,912 - B158DRAFT_1924 0.58 -0.8
60,990 - B158DRAFT_1924 0.70 +0.4
61,018 + B158DRAFT_1924 0.75 -0.4
61,050 + B158DRAFT_1924 0.80 -0.4
61,109 + B158DRAFT_1924 0.89 -0.2
61,117 - -0.5
61,153 - -0.1
61,166 + -0.2
61,172 - +0.2
61,172 - -1.2
61,174 - -0.6
61,179 - +1.0
61,269 + +0.2
61,269 + -1.2
61,269 + -0.9
61,269 + -0.3
61,269 + -0.0
61,269 + -0.3
61,269 + -0.8
61,274 + -2.1
61,274 + -1.5
61,277 - +0.2
61,277 - -0.8
61,277 - -0.3
61,277 - -0.3
61,277 - +0.8
61,277 - -0.1
61,277 - +0.2
61,277 - -0.2
61,277 - +0.4
61,277 - +0.7
61,277 - +1.1
61,282 - -0.2
61,287 - -0.5
61,418 + B158DRAFT_1925 0.10 -1.2
61,438 + B158DRAFT_1925 0.11 -1.7
61,462 + B158DRAFT_1925 0.12 -1.0
61,502 - B158DRAFT_1925 0.14 -2.8
61,511 + B158DRAFT_1925 0.15 +0.2
61,519 - B158DRAFT_1925 0.15 -0.1
61,541 - B158DRAFT_1925 0.16 -0.1
61,573 + B158DRAFT_1925 0.18 +0.0
61,573 + B158DRAFT_1925 0.18 -2.0
61,573 + B158DRAFT_1925 0.18 -0.8
61,581 - B158DRAFT_1925 0.19 -2.3
61,581 - B158DRAFT_1925 0.19 +2.1
61,581 - B158DRAFT_1925 0.19 -0.1
61,581 - B158DRAFT_1925 0.19 -0.2
61,581 - B158DRAFT_1925 0.19 -1.2
61,611 + B158DRAFT_1925 0.20 -0.9
61,692 - B158DRAFT_1925 0.24 +0.6
61,692 - B158DRAFT_1925 0.24 -1.0
61,714 - B158DRAFT_1925 0.26 -0.9
61,720 + B158DRAFT_1925 0.26 +0.0
61,722 - B158DRAFT_1925 0.26 -0.6
61,817 + B158DRAFT_1925 0.31 +0.0
61,825 - B158DRAFT_1925 0.31 +0.0
61,949 + B158DRAFT_1925 0.38 +0.0
62,015 + B158DRAFT_1925 0.41 -0.3
62,037 - B158DRAFT_1925 0.42 -1.6
62,037 - B158DRAFT_1925 0.42 -1.1
62,074 + B158DRAFT_1925 0.44 -3.3
62,074 + B158DRAFT_1925 0.44 -0.8
62,082 - B158DRAFT_1925 0.45 -0.6
62,087 + B158DRAFT_1925 0.45 +0.3
62,106 + B158DRAFT_1925 0.46 +0.4
62,114 - B158DRAFT_1925 0.46 -0.5
62,114 - B158DRAFT_1925 0.46 -1.1

Or see this region's nucleotide sequence