Experiment: m.b. Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1813 and B158DRAFT_1814 are separated by 69 nucleotides B158DRAFT_1814 and B158DRAFT_1815 are separated by 2 nucleotides B158DRAFT_1815 and B158DRAFT_1816 are separated by 72 nucleotides B158DRAFT_1816 and B158DRAFT_1817 are separated by 15 nucleotides
B158DRAFT_1813: B158DRAFT_1813 - N-carbamoylputrescine amidase, at 1,913,286 to 1,914,143
_1813
B158DRAFT_1814: B158DRAFT_1814 - Predicted enzyme related to lactoylglutathione lyase, at 1,914,213 to 1,914,590
_1814
B158DRAFT_1815: B158DRAFT_1815 - Rhodanese-related sulfurtransferase, at 1,914,593 to 1,915,273
_1815
B158DRAFT_1816: B158DRAFT_1816 - tRNA_Arg_CCT, at 1,915,346 to 1,915,422
_1816
B158DRAFT_1817: B158DRAFT_1817 - seryl-tRNA synthetase (EC 6.1.1.11), at 1,915,438 to 1,916,706
_1817
Position (kb)
1914
1915
1916 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1913.594 kb on + strand, within B158DRAFT_1813 at 1913.596 kb on - strand, within B158DRAFT_1813 at 1913.604 kb on + strand, within B158DRAFT_1813 at 1913.695 kb on + strand, within B158DRAFT_1813 at 1913.695 kb on + strand, within B158DRAFT_1813 at 1913.695 kb on + strand, within B158DRAFT_1813 at 1913.703 kb on + strand, within B158DRAFT_1813 at 1913.703 kb on - strand, within B158DRAFT_1813 at 1913.703 kb on - strand, within B158DRAFT_1813 at 1913.711 kb on - strand, within B158DRAFT_1813 at 1913.734 kb on - strand, within B158DRAFT_1813 at 1913.748 kb on + strand, within B158DRAFT_1813 at 1913.748 kb on + strand, within B158DRAFT_1813 at 1913.748 kb on + strand, within B158DRAFT_1813 at 1913.748 kb on + strand, within B158DRAFT_1813 at 1913.756 kb on - strand, within B158DRAFT_1813 at 1913.756 kb on - strand, within B158DRAFT_1813 at 1913.756 kb on - strand, within B158DRAFT_1813 at 1913.756 kb on - strand, within B158DRAFT_1813 at 1913.756 kb on - strand, within B158DRAFT_1813 at 1913.756 kb on - strand, within B158DRAFT_1813 at 1913.791 kb on + strand, within B158DRAFT_1813 at 1913.791 kb on + strand, within B158DRAFT_1813 at 1913.791 kb on + strand, within B158DRAFT_1813 at 1913.791 kb on + strand, within B158DRAFT_1813 at 1913.791 kb on - strand, within B158DRAFT_1813 at 1913.799 kb on - strand, within B158DRAFT_1813 at 1913.799 kb on - strand, within B158DRAFT_1813 at 1913.799 kb on - strand, within B158DRAFT_1813 at 1913.799 kb on - strand, within B158DRAFT_1813 at 1913.824 kb on + strand, within B158DRAFT_1813 at 1913.824 kb on + strand, within B158DRAFT_1813 at 1913.824 kb on + strand, within B158DRAFT_1813 at 1913.832 kb on - strand, within B158DRAFT_1813 at 1913.832 kb on - strand, within B158DRAFT_1813 at 1913.832 kb on - strand, within B158DRAFT_1813 at 1913.837 kb on - strand, within B158DRAFT_1813 at 1913.846 kb on - strand, within B158DRAFT_1813 at 1913.854 kb on + strand, within B158DRAFT_1813 at 1913.856 kb on + strand, within B158DRAFT_1813 at 1913.864 kb on - strand, within B158DRAFT_1813 at 1913.877 kb on + strand, within B158DRAFT_1813 at 1913.883 kb on + strand, within B158DRAFT_1813 at 1913.885 kb on - strand, within B158DRAFT_1813 at 1913.891 kb on - strand, within B158DRAFT_1813 at 1913.932 kb on + strand, within B158DRAFT_1813 at 1913.937 kb on + strand, within B158DRAFT_1813 at 1913.940 kb on - strand, within B158DRAFT_1813 at 1913.940 kb on - strand, within B158DRAFT_1813 at 1913.940 kb on - strand, within B158DRAFT_1813 at 1914.014 kb on - strand, within B158DRAFT_1813 at 1914.034 kb on + strand, within B158DRAFT_1813 at 1914.041 kb on - strand, within B158DRAFT_1813 at 1914.051 kb on - strand, within B158DRAFT_1813 at 1914.095 kb on + strand at 1914.095 kb on + strand at 1914.095 kb on + strand at 1914.095 kb on + strand at 1914.103 kb on - strand at 1914.103 kb on - strand at 1914.103 kb on - strand at 1914.103 kb on - strand at 1914.103 kb on - strand at 1914.104 kb on + strand at 1914.123 kb on - strand at 1914.127 kb on + strand at 1914.135 kb on - strand at 1914.188 kb on - strand at 1914.203 kb on - strand at 1914.254 kb on + strand, within B158DRAFT_1814 at 1914.279 kb on + strand, within B158DRAFT_1814 at 1914.279 kb on + strand, within B158DRAFT_1814 at 1914.287 kb on - strand, within B158DRAFT_1814 at 1914.316 kb on + strand, within B158DRAFT_1814 at 1914.388 kb on - strand, within B158DRAFT_1814 at 1914.484 kb on - strand, within B158DRAFT_1814 at 1914.638 kb on - strand at 1914.645 kb on + strand at 1914.645 kb on + strand at 1914.645 kb on + strand at 1914.653 kb on - strand at 1914.709 kb on + strand, within B158DRAFT_1815 at 1914.744 kb on + strand, within B158DRAFT_1815 at 1914.772 kb on + strand, within B158DRAFT_1815 at 1914.773 kb on + strand, within B158DRAFT_1815 at 1914.781 kb on - strand, within B158DRAFT_1815 at 1914.792 kb on - strand, within B158DRAFT_1815 at 1914.896 kb on + strand, within B158DRAFT_1815 at 1914.901 kb on + strand, within B158DRAFT_1815 at 1914.901 kb on + strand, within B158DRAFT_1815 at 1914.909 kb on - strand, within B158DRAFT_1815 at 1914.925 kb on + strand, within B158DRAFT_1815 at 1914.982 kb on - strand, within B158DRAFT_1815 at 1914.993 kb on - strand, within B158DRAFT_1815 at 1914.993 kb on - strand, within B158DRAFT_1815 at 1915.031 kb on + strand, within B158DRAFT_1815 at 1915.031 kb on + strand, within B158DRAFT_1815 at 1915.031 kb on + strand, within B158DRAFT_1815 at 1915.032 kb on - strand, within B158DRAFT_1815 at 1915.040 kb on + strand, within B158DRAFT_1815 at 1915.048 kb on - strand, within B158DRAFT_1815 at 1915.061 kb on + strand, within B158DRAFT_1815 at 1915.061 kb on + strand, within B158DRAFT_1815 at 1915.077 kb on - strand, within B158DRAFT_1815 at 1915.079 kb on + strand, within B158DRAFT_1815 at 1915.087 kb on - strand, within B158DRAFT_1815 at 1915.087 kb on - strand, within B158DRAFT_1815 at 1915.156 kb on - strand, within B158DRAFT_1815 at 1915.165 kb on - strand, within B158DRAFT_1815 at 1915.165 kb on - strand, within B158DRAFT_1815 at 1915.172 kb on + strand, within B158DRAFT_1815 at 1915.173 kb on - strand, within B158DRAFT_1815 at 1915.173 kb on - strand, within B158DRAFT_1815 at 1915.180 kb on - strand, within B158DRAFT_1815 at 1915.180 kb on - strand, within B158DRAFT_1815 at 1915.327 kb on - strand at 1915.388 kb on - strand, within B158DRAFT_1816 at 1915.388 kb on - strand, within B158DRAFT_1816 at 1915.397 kb on + strand, within B158DRAFT_1816 at 1915.405 kb on - strand, within B158DRAFT_1816 at 1915.405 kb on - strand, within B158DRAFT_1816 at 1915.408 kb on - strand, within B158DRAFT_1816 at 1915.453 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM remove 1,913,594 + B158DRAFT_1813 0.36 +0.8 1,913,596 - B158DRAFT_1813 0.36 +0.9 1,913,604 + B158DRAFT_1813 0.37 -2.3 1,913,695 + B158DRAFT_1813 0.48 +0.4 1,913,695 + B158DRAFT_1813 0.48 -2.1 1,913,695 + B158DRAFT_1813 0.48 +2.5 1,913,703 + B158DRAFT_1813 0.49 -0.5 1,913,703 - B158DRAFT_1813 0.49 -0.5 1,913,703 - B158DRAFT_1813 0.49 -1.0 1,913,711 - B158DRAFT_1813 0.50 -0.8 1,913,734 - B158DRAFT_1813 0.52 +0.5 1,913,748 + B158DRAFT_1813 0.54 -2.4 1,913,748 + B158DRAFT_1813 0.54 -1.8 1,913,748 + B158DRAFT_1813 0.54 -0.1 1,913,748 + B158DRAFT_1813 0.54 -0.7 1,913,756 - B158DRAFT_1813 0.55 -0.2 1,913,756 - B158DRAFT_1813 0.55 -0.8 1,913,756 - B158DRAFT_1813 0.55 -1.0 1,913,756 - B158DRAFT_1813 0.55 -0.3 1,913,756 - B158DRAFT_1813 0.55 -3.0 1,913,756 - B158DRAFT_1813 0.55 -0.3 1,913,791 + B158DRAFT_1813 0.59 +0.1 1,913,791 + B158DRAFT_1813 0.59 +1.6 1,913,791 + B158DRAFT_1813 0.59 -1.9 1,913,791 + B158DRAFT_1813 0.59 -1.6 1,913,791 - B158DRAFT_1813 0.59 -2.2 1,913,799 - B158DRAFT_1813 0.60 -0.3 1,913,799 - B158DRAFT_1813 0.60 +0.7 1,913,799 - B158DRAFT_1813 0.60 -1.4 1,913,799 - B158DRAFT_1813 0.60 +0.4 1,913,824 + B158DRAFT_1813 0.63 +1.5 1,913,824 + B158DRAFT_1813 0.63 -0.2 1,913,824 + B158DRAFT_1813 0.63 +0.9 1,913,832 - B158DRAFT_1813 0.64 -2.6 1,913,832 - B158DRAFT_1813 0.64 -0.4 1,913,832 - B158DRAFT_1813 0.64 -0.4 1,913,837 - B158DRAFT_1813 0.64 -1.3 1,913,846 - B158DRAFT_1813 0.65 +0.8 1,913,854 + B158DRAFT_1813 0.66 +1.1 1,913,856 + B158DRAFT_1813 0.66 -0.9 1,913,864 - B158DRAFT_1813 0.67 -0.8 1,913,877 + B158DRAFT_1813 0.69 -1.3 1,913,883 + B158DRAFT_1813 0.70 -1.5 1,913,885 - B158DRAFT_1813 0.70 -0.6 1,913,891 - B158DRAFT_1813 0.71 -1.9 1,913,932 + B158DRAFT_1813 0.75 +0.7 1,913,937 + B158DRAFT_1813 0.76 -1.1 1,913,940 - B158DRAFT_1813 0.76 +0.1 1,913,940 - B158DRAFT_1813 0.76 -0.5 1,913,940 - B158DRAFT_1813 0.76 +0.1 1,914,014 - B158DRAFT_1813 0.85 -0.1 1,914,034 + B158DRAFT_1813 0.87 -0.4 1,914,041 - B158DRAFT_1813 0.88 -0.1 1,914,051 - B158DRAFT_1813 0.89 -0.8 1,914,095 + -0.5 1,914,095 + -0.3 1,914,095 + -1.1 1,914,095 + +1.2 1,914,103 - +0.3 1,914,103 - +1.3 1,914,103 - -1.5 1,914,103 - +0.3 1,914,103 - -1.3 1,914,104 + -1.0 1,914,123 - +1.3 1,914,127 + -3.2 1,914,135 - -0.3 1,914,188 - -0.2 1,914,203 - -1.0 1,914,254 + B158DRAFT_1814 0.11 -0.7 1,914,279 + B158DRAFT_1814 0.17 +0.0 1,914,279 + B158DRAFT_1814 0.17 +0.4 1,914,287 - B158DRAFT_1814 0.20 -0.4 1,914,316 + B158DRAFT_1814 0.27 -0.3 1,914,388 - B158DRAFT_1814 0.46 -1.3 1,914,484 - B158DRAFT_1814 0.72 +0.1 1,914,638 - -0.9 1,914,645 + -2.0 1,914,645 + -1.0 1,914,645 + -1.6 1,914,653 - -0.7 1,914,709 + B158DRAFT_1815 0.17 +0.1 1,914,744 + B158DRAFT_1815 0.22 +0.1 1,914,772 + B158DRAFT_1815 0.26 -1.2 1,914,773 + B158DRAFT_1815 0.26 -0.0 1,914,781 - B158DRAFT_1815 0.28 +1.6 1,914,792 - B158DRAFT_1815 0.29 -0.7 1,914,896 + B158DRAFT_1815 0.44 -1.4 1,914,901 + B158DRAFT_1815 0.45 +0.3 1,914,901 + B158DRAFT_1815 0.45 -0.9 1,914,909 - B158DRAFT_1815 0.46 -1.6 1,914,925 + B158DRAFT_1815 0.49 -1.0 1,914,982 - B158DRAFT_1815 0.57 -0.5 1,914,993 - B158DRAFT_1815 0.59 +1.0 1,914,993 - B158DRAFT_1815 0.59 +0.3 1,915,031 + B158DRAFT_1815 0.64 +0.1 1,915,031 + B158DRAFT_1815 0.64 +1.0 1,915,031 + B158DRAFT_1815 0.64 +0.7 1,915,032 - B158DRAFT_1815 0.64 -0.3 1,915,040 + B158DRAFT_1815 0.66 -0.4 1,915,048 - B158DRAFT_1815 0.67 -0.2 1,915,061 + B158DRAFT_1815 0.69 +0.3 1,915,061 + B158DRAFT_1815 0.69 +1.8 1,915,077 - B158DRAFT_1815 0.71 -2.8 1,915,079 + B158DRAFT_1815 0.71 +1.3 1,915,087 - B158DRAFT_1815 0.73 +0.3 1,915,087 - B158DRAFT_1815 0.73 +0.6 1,915,156 - B158DRAFT_1815 0.83 +0.3 1,915,165 - B158DRAFT_1815 0.84 +0.1 1,915,165 - B158DRAFT_1815 0.84 -1.2 1,915,172 + B158DRAFT_1815 0.85 +0.1 1,915,173 - B158DRAFT_1815 0.85 +0.2 1,915,173 - B158DRAFT_1815 0.85 +0.0 1,915,180 - B158DRAFT_1815 0.86 +0.6 1,915,180 - B158DRAFT_1815 0.86 -1.2 1,915,327 - +0.1 1,915,388 - B158DRAFT_1816 0.55 -0.5 1,915,388 - B158DRAFT_1816 0.55 -0.6 1,915,397 + B158DRAFT_1816 0.66 -0.5 1,915,405 - B158DRAFT_1816 0.77 -1.5 1,915,405 - B158DRAFT_1816 0.77 -0.6 1,915,408 - B158DRAFT_1816 0.81 -1.3 1,915,453 + +1.0
Or see this region's nucleotide sequence