Experiment: m.b. Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1793 and B158DRAFT_1794 are separated by 71 nucleotides B158DRAFT_1794 and B158DRAFT_1795 are separated by 100 nucleotides B158DRAFT_1795 and B158DRAFT_1796 are separated by 180 nucleotides
B158DRAFT_1793: B158DRAFT_1793 - Alanine dehydrogenase, at 1,886,933 to 1,888,189
_1793
B158DRAFT_1794: B158DRAFT_1794 - Uncharacterized protein conserved in bacteria, at 1,888,261 to 1,888,593
_1794
B158DRAFT_1795: B158DRAFT_1795 - Ion transport protein., at 1,888,694 to 1,889,593
_1795
B158DRAFT_1796: B158DRAFT_1796 - uncharacterized domain HDIG, at 1,889,774 to 1,890,991
_1796
Position (kb)
1888
1889
1890 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1887.700 kb on - strand, within B158DRAFT_1793 at 1887.725 kb on + strand, within B158DRAFT_1793 at 1887.733 kb on - strand, within B158DRAFT_1793 at 1887.895 kb on + strand, within B158DRAFT_1793 at 1887.899 kb on + strand, within B158DRAFT_1793 at 1887.899 kb on + strand, within B158DRAFT_1793 at 1887.905 kb on + strand, within B158DRAFT_1793 at 1887.905 kb on + strand, within B158DRAFT_1793 at 1887.905 kb on + strand, within B158DRAFT_1793 at 1887.905 kb on + strand, within B158DRAFT_1793 at 1887.905 kb on + strand, within B158DRAFT_1793 at 1887.905 kb on + strand, within B158DRAFT_1793 at 1887.913 kb on - strand, within B158DRAFT_1793 at 1887.913 kb on - strand, within B158DRAFT_1793 at 1887.940 kb on - strand, within B158DRAFT_1793 at 1888.008 kb on + strand, within B158DRAFT_1793 at 1888.016 kb on - strand, within B158DRAFT_1793 at 1888.025 kb on - strand, within B158DRAFT_1793 at 1888.096 kb on - strand at 1888.120 kb on + strand at 1888.248 kb on + strand at 1888.248 kb on + strand at 1888.248 kb on + strand at 1888.248 kb on + strand at 1888.249 kb on - strand at 1888.253 kb on + strand at 1888.256 kb on - strand at 1888.256 kb on - strand at 1888.257 kb on - strand at 1888.266 kb on + strand at 1888.320 kb on - strand, within B158DRAFT_1794 at 1888.353 kb on - strand, within B158DRAFT_1794 at 1888.427 kb on + strand, within B158DRAFT_1794 at 1888.435 kb on - strand, within B158DRAFT_1794 at 1888.450 kb on - strand, within B158DRAFT_1794 at 1888.506 kb on - strand, within B158DRAFT_1794 at 1888.538 kb on + strand, within B158DRAFT_1794 at 1888.548 kb on + strand, within B158DRAFT_1794 at 1888.548 kb on + strand, within B158DRAFT_1794 at 1888.556 kb on - strand, within B158DRAFT_1794 at 1888.556 kb on - strand, within B158DRAFT_1794 at 1888.556 kb on - strand, within B158DRAFT_1794 at 1888.556 kb on - strand, within B158DRAFT_1794 at 1888.694 kb on - strand at 1888.745 kb on + strand at 1888.802 kb on + strand, within B158DRAFT_1795 at 1888.824 kb on + strand, within B158DRAFT_1795 at 1888.832 kb on - strand, within B158DRAFT_1795 at 1888.918 kb on - strand, within B158DRAFT_1795 at 1888.939 kb on + strand, within B158DRAFT_1795 at 1888.939 kb on + strand, within B158DRAFT_1795 at 1888.939 kb on + strand, within B158DRAFT_1795 at 1888.939 kb on + strand, within B158DRAFT_1795 at 1888.949 kb on + strand, within B158DRAFT_1795 at 1888.952 kb on - strand, within B158DRAFT_1795 at 1888.959 kb on - strand, within B158DRAFT_1795 at 1888.959 kb on - strand, within B158DRAFT_1795 at 1888.966 kb on - strand, within B158DRAFT_1795 at 1888.970 kb on + strand, within B158DRAFT_1795 at 1888.973 kb on - strand, within B158DRAFT_1795 at 1888.983 kb on - strand, within B158DRAFT_1795 at 1888.989 kb on - strand, within B158DRAFT_1795 at 1889.039 kb on - strand, within B158DRAFT_1795 at 1889.055 kb on + strand, within B158DRAFT_1795 at 1889.057 kb on - strand, within B158DRAFT_1795 at 1889.057 kb on - strand, within B158DRAFT_1795 at 1889.100 kb on - strand, within B158DRAFT_1795 at 1889.125 kb on + strand, within B158DRAFT_1795 at 1889.132 kb on + strand, within B158DRAFT_1795 at 1889.133 kb on - strand, within B158DRAFT_1795 at 1889.137 kb on + strand, within B158DRAFT_1795 at 1889.137 kb on + strand, within B158DRAFT_1795 at 1889.137 kb on + strand, within B158DRAFT_1795 at 1889.137 kb on + strand, within B158DRAFT_1795 at 1889.137 kb on + strand, within B158DRAFT_1795 at 1889.140 kb on - strand, within B158DRAFT_1795 at 1889.145 kb on - strand, within B158DRAFT_1795 at 1889.145 kb on - strand, within B158DRAFT_1795 at 1889.254 kb on + strand, within B158DRAFT_1795 at 1889.305 kb on + strand, within B158DRAFT_1795 at 1889.355 kb on + strand, within B158DRAFT_1795 at 1889.355 kb on + strand, within B158DRAFT_1795 at 1889.355 kb on + strand, within B158DRAFT_1795 at 1889.355 kb on + strand, within B158DRAFT_1795 at 1889.586 kb on + strand at 1889.662 kb on - strand at 1889.805 kb on + strand at 1889.829 kb on - strand at 1889.839 kb on - strand at 1889.842 kb on + strand at 1889.847 kb on + strand at 1889.850 kb on - strand at 1889.850 kb on - strand at 1889.855 kb on - strand at 1889.866 kb on - strand at 1889.948 kb on + strand, within B158DRAFT_1796 at 1889.951 kb on - strand, within B158DRAFT_1796 at 1889.953 kb on + strand, within B158DRAFT_1796 at 1889.953 kb on + strand, within B158DRAFT_1796 at 1889.953 kb on + strand, within B158DRAFT_1796 at 1889.961 kb on - strand, within B158DRAFT_1796 at 1889.961 kb on - strand, within B158DRAFT_1796 at 1889.961 kb on - strand, within B158DRAFT_1796 at 1889.961 kb on - strand, within B158DRAFT_1796 at 1889.961 kb on - strand, within B158DRAFT_1796 at 1889.985 kb on - strand, within B158DRAFT_1796 at 1889.997 kb on + strand, within B158DRAFT_1796 at 1889.997 kb on - strand, within B158DRAFT_1796 at 1890.077 kb on + strand, within B158DRAFT_1796 at 1890.143 kb on + strand, within B158DRAFT_1796 at 1890.143 kb on + strand, within B158DRAFT_1796 at 1890.143 kb on + strand, within B158DRAFT_1796 at 1890.151 kb on - strand, within B158DRAFT_1796 at 1890.151 kb on - strand, within B158DRAFT_1796 at 1890.151 kb on - strand, within B158DRAFT_1796 at 1890.182 kb on + strand, within B158DRAFT_1796 at 1890.192 kb on + strand, within B158DRAFT_1796 at 1890.200 kb on - strand, within B158DRAFT_1796 at 1890.225 kb on + strand, within B158DRAFT_1796 at 1890.227 kb on + strand, within B158DRAFT_1796 at 1890.227 kb on + strand, within B158DRAFT_1796 at 1890.227 kb on + strand, within B158DRAFT_1796 at 1890.233 kb on - strand, within B158DRAFT_1796 at 1890.233 kb on - strand, within B158DRAFT_1796 at 1890.235 kb on - strand, within B158DRAFT_1796 at 1890.235 kb on - strand, within B158DRAFT_1796 at 1890.285 kb on - strand, within B158DRAFT_1796 at 1890.337 kb on + strand, within B158DRAFT_1796 at 1890.367 kb on + strand, within B158DRAFT_1796 at 1890.373 kb on + strand, within B158DRAFT_1796 at 1890.405 kb on + strand, within B158DRAFT_1796 at 1890.429 kb on + strand, within B158DRAFT_1796 at 1890.437 kb on - strand, within B158DRAFT_1796 at 1890.437 kb on - strand, within B158DRAFT_1796 at 1890.439 kb on + strand, within B158DRAFT_1796 at 1890.439 kb on + strand, within B158DRAFT_1796 at 1890.439 kb on + strand, within B158DRAFT_1796 at 1890.439 kb on + strand, within B158DRAFT_1796 at 1890.439 kb on + strand, within B158DRAFT_1796 at 1890.447 kb on - strand, within B158DRAFT_1796 at 1890.447 kb on - strand, within B158DRAFT_1796 at 1890.519 kb on + strand, within B158DRAFT_1796 at 1890.520 kb on + strand, within B158DRAFT_1796 at 1890.527 kb on - strand, within B158DRAFT_1796 at 1890.536 kb on + strand, within B158DRAFT_1796 at 1890.544 kb on - strand, within B158DRAFT_1796 at 1890.587 kb on + strand, within B158DRAFT_1796
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM remove 1,887,700 - B158DRAFT_1793 0.61 +0.0 1,887,725 + B158DRAFT_1793 0.63 -2.4 1,887,733 - B158DRAFT_1793 0.64 -3.0 1,887,895 + B158DRAFT_1793 0.77 -0.5 1,887,899 + B158DRAFT_1793 0.77 +2.5 1,887,899 + B158DRAFT_1793 0.77 -0.2 1,887,905 + B158DRAFT_1793 0.77 -0.8 1,887,905 + B158DRAFT_1793 0.77 -0.6 1,887,905 + B158DRAFT_1793 0.77 +0.4 1,887,905 + B158DRAFT_1793 0.77 -1.3 1,887,905 + B158DRAFT_1793 0.77 -1.9 1,887,905 + B158DRAFT_1793 0.77 -2.0 1,887,913 - B158DRAFT_1793 0.78 -0.6 1,887,913 - B158DRAFT_1793 0.78 +1.9 1,887,940 - B158DRAFT_1793 0.80 +0.2 1,888,008 + B158DRAFT_1793 0.86 +0.3 1,888,016 - B158DRAFT_1793 0.86 -1.8 1,888,025 - B158DRAFT_1793 0.87 -0.1 1,888,096 - -1.8 1,888,120 + +0.3 1,888,248 + -1.6 1,888,248 + -1.9 1,888,248 + +1.2 1,888,248 + -1.3 1,888,249 - +1.1 1,888,253 + -1.9 1,888,256 - -0.2 1,888,256 - -0.2 1,888,257 - -0.6 1,888,266 + -1.1 1,888,320 - B158DRAFT_1794 0.18 -1.2 1,888,353 - B158DRAFT_1794 0.28 +0.3 1,888,427 + B158DRAFT_1794 0.50 +0.3 1,888,435 - B158DRAFT_1794 0.52 +2.1 1,888,450 - B158DRAFT_1794 0.57 -1.0 1,888,506 - B158DRAFT_1794 0.74 +0.4 1,888,538 + B158DRAFT_1794 0.83 +0.5 1,888,548 + B158DRAFT_1794 0.86 -0.0 1,888,548 + B158DRAFT_1794 0.86 +0.3 1,888,556 - B158DRAFT_1794 0.89 +1.0 1,888,556 - B158DRAFT_1794 0.89 -1.0 1,888,556 - B158DRAFT_1794 0.89 -0.1 1,888,556 - B158DRAFT_1794 0.89 -0.5 1,888,694 - +0.4 1,888,745 + +0.2 1,888,802 + B158DRAFT_1795 0.12 +1.0 1,888,824 + B158DRAFT_1795 0.14 -0.8 1,888,832 - B158DRAFT_1795 0.15 -0.6 1,888,918 - B158DRAFT_1795 0.25 -3.3 1,888,939 + B158DRAFT_1795 0.27 -0.0 1,888,939 + B158DRAFT_1795 0.27 -0.5 1,888,939 + B158DRAFT_1795 0.27 -0.7 1,888,939 + B158DRAFT_1795 0.27 -0.6 1,888,949 + B158DRAFT_1795 0.28 -0.2 1,888,952 - B158DRAFT_1795 0.29 +1.0 1,888,959 - B158DRAFT_1795 0.29 +0.7 1,888,959 - B158DRAFT_1795 0.29 +0.6 1,888,966 - B158DRAFT_1795 0.30 +1.6 1,888,970 + B158DRAFT_1795 0.31 +0.2 1,888,973 - B158DRAFT_1795 0.31 -1.3 1,888,983 - B158DRAFT_1795 0.32 -1.2 1,888,989 - B158DRAFT_1795 0.33 +1.5 1,889,039 - B158DRAFT_1795 0.38 -0.1 1,889,055 + B158DRAFT_1795 0.40 +0.4 1,889,057 - B158DRAFT_1795 0.40 +0.3 1,889,057 - B158DRAFT_1795 0.40 -0.6 1,889,100 - B158DRAFT_1795 0.45 -0.9 1,889,125 + B158DRAFT_1795 0.48 -1.5 1,889,132 + B158DRAFT_1795 0.49 -1.3 1,889,133 - B158DRAFT_1795 0.49 -1.2 1,889,137 + B158DRAFT_1795 0.49 -0.7 1,889,137 + B158DRAFT_1795 0.49 -1.1 1,889,137 + B158DRAFT_1795 0.49 +0.1 1,889,137 + B158DRAFT_1795 0.49 -0.3 1,889,137 + B158DRAFT_1795 0.49 -0.9 1,889,140 - B158DRAFT_1795 0.50 +0.6 1,889,145 - B158DRAFT_1795 0.50 -1.1 1,889,145 - B158DRAFT_1795 0.50 +0.2 1,889,254 + B158DRAFT_1795 0.62 -3.0 1,889,305 + B158DRAFT_1795 0.68 -1.8 1,889,355 + B158DRAFT_1795 0.73 -0.2 1,889,355 + B158DRAFT_1795 0.73 -0.2 1,889,355 + B158DRAFT_1795 0.73 +1.5 1,889,355 + B158DRAFT_1795 0.73 -1.9 1,889,586 + +0.2 1,889,662 - +2.3 1,889,805 + +1.2 1,889,829 - -0.2 1,889,839 - +0.8 1,889,842 + -2.7 1,889,847 + +1.4 1,889,850 - -2.4 1,889,850 - -1.3 1,889,855 - +0.8 1,889,866 - +0.7 1,889,948 + B158DRAFT_1796 0.14 -0.5 1,889,951 - B158DRAFT_1796 0.15 +1.7 1,889,953 + B158DRAFT_1796 0.15 +0.4 1,889,953 + B158DRAFT_1796 0.15 +1.4 1,889,953 + B158DRAFT_1796 0.15 +0.4 1,889,961 - B158DRAFT_1796 0.15 +1.1 1,889,961 - B158DRAFT_1796 0.15 +0.8 1,889,961 - B158DRAFT_1796 0.15 -2.6 1,889,961 - B158DRAFT_1796 0.15 +0.7 1,889,961 - B158DRAFT_1796 0.15 +0.4 1,889,985 - B158DRAFT_1796 0.17 -1.3 1,889,997 + B158DRAFT_1796 0.18 +1.3 1,889,997 - B158DRAFT_1796 0.18 +0.0 1,890,077 + B158DRAFT_1796 0.25 -0.1 1,890,143 + B158DRAFT_1796 0.30 +0.9 1,890,143 + B158DRAFT_1796 0.30 -1.6 1,890,143 + B158DRAFT_1796 0.30 +1.4 1,890,151 - B158DRAFT_1796 0.31 -0.9 1,890,151 - B158DRAFT_1796 0.31 -0.4 1,890,151 - B158DRAFT_1796 0.31 +0.7 1,890,182 + B158DRAFT_1796 0.33 -1.9 1,890,192 + B158DRAFT_1796 0.34 +0.5 1,890,200 - B158DRAFT_1796 0.35 +1.9 1,890,225 + B158DRAFT_1796 0.37 +1.7 1,890,227 + B158DRAFT_1796 0.37 +2.1 1,890,227 + B158DRAFT_1796 0.37 -2.3 1,890,227 + B158DRAFT_1796 0.37 +2.0 1,890,233 - B158DRAFT_1796 0.38 -1.1 1,890,233 - B158DRAFT_1796 0.38 -0.0 1,890,235 - B158DRAFT_1796 0.38 -2.4 1,890,235 - B158DRAFT_1796 0.38 +0.3 1,890,285 - B158DRAFT_1796 0.42 +1.2 1,890,337 + B158DRAFT_1796 0.46 +1.7 1,890,367 + B158DRAFT_1796 0.49 +2.7 1,890,373 + B158DRAFT_1796 0.49 +2.7 1,890,405 + B158DRAFT_1796 0.52 +0.7 1,890,429 + B158DRAFT_1796 0.54 -1.6 1,890,437 - B158DRAFT_1796 0.54 -0.0 1,890,437 - B158DRAFT_1796 0.54 +0.8 1,890,439 + B158DRAFT_1796 0.55 -0.8 1,890,439 + B158DRAFT_1796 0.55 +2.2 1,890,439 + B158DRAFT_1796 0.55 +0.5 1,890,439 + B158DRAFT_1796 0.55 +2.4 1,890,439 + B158DRAFT_1796 0.55 +0.7 1,890,447 - B158DRAFT_1796 0.55 -0.9 1,890,447 - B158DRAFT_1796 0.55 +0.9 1,890,519 + B158DRAFT_1796 0.61 +0.4 1,890,520 + B158DRAFT_1796 0.61 -0.5 1,890,527 - B158DRAFT_1796 0.62 -1.6 1,890,536 + B158DRAFT_1796 0.63 -0.3 1,890,544 - B158DRAFT_1796 0.63 +1.2 1,890,587 + B158DRAFT_1796 0.67 -0.1
Or see this region's nucleotide sequence