Experiment: m.b. Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1591 and B158DRAFT_1592 are separated by 93 nucleotides B158DRAFT_1592 and B158DRAFT_1593 are separated by 69 nucleotides B158DRAFT_1593 and B158DRAFT_1594 are separated by 232 nucleotides B158DRAFT_1594 and B158DRAFT_1595 are separated by 158 nucleotides
B158DRAFT_1591: B158DRAFT_1591 - DNA internalization-related competence protein ComEC/Rec2, at 1,652,115 to 1,654,454
_1591
B158DRAFT_1592: B158DRAFT_1592 - hypothetical protein, at 1,654,548 to 1,655,108
_1592
B158DRAFT_1593: B158DRAFT_1593 - hypothetical protein, at 1,655,178 to 1,655,423
_1593
B158DRAFT_1594: B158DRAFT_1594 - hypothetical protein, at 1,655,656 to 1,655,871
_1594
B158DRAFT_1595: B158DRAFT_1595 - hypothetical protein, at 1,656,030 to 1,656,563
_1595
Position (kb)
1654
1655
1656 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1653.597 kb on - strand, within B158DRAFT_1591 at 1653.597 kb on - strand, within B158DRAFT_1591 at 1653.605 kb on - strand, within B158DRAFT_1591 at 1653.667 kb on + strand, within B158DRAFT_1591 at 1653.667 kb on + strand, within B158DRAFT_1591 at 1653.670 kb on - strand, within B158DRAFT_1591 at 1653.720 kb on + strand, within B158DRAFT_1591 at 1653.725 kb on + strand, within B158DRAFT_1591 at 1653.777 kb on + strand, within B158DRAFT_1591 at 1653.777 kb on + strand, within B158DRAFT_1591 at 1653.777 kb on + strand, within B158DRAFT_1591 at 1653.785 kb on - strand, within B158DRAFT_1591 at 1653.785 kb on - strand, within B158DRAFT_1591 at 1653.785 kb on - strand, within B158DRAFT_1591 at 1653.785 kb on - strand, within B158DRAFT_1591 at 1653.787 kb on + strand, within B158DRAFT_1591 at 1653.792 kb on + strand, within B158DRAFT_1591 at 1653.795 kb on - strand, within B158DRAFT_1591 at 1653.800 kb on - strand, within B158DRAFT_1591 at 1653.827 kb on + strand, within B158DRAFT_1591 at 1653.835 kb on - strand, within B158DRAFT_1591 at 1653.835 kb on - strand, within B158DRAFT_1591 at 1653.835 kb on - strand, within B158DRAFT_1591 at 1653.842 kb on - strand, within B158DRAFT_1591 at 1653.859 kb on + strand, within B158DRAFT_1591 at 1653.879 kb on + strand, within B158DRAFT_1591 at 1653.879 kb on + strand, within B158DRAFT_1591 at 1653.887 kb on - strand, within B158DRAFT_1591 at 1653.887 kb on - strand, within B158DRAFT_1591 at 1653.974 kb on + strand, within B158DRAFT_1591 at 1653.991 kb on + strand, within B158DRAFT_1591 at 1653.998 kb on + strand, within B158DRAFT_1591 at 1653.998 kb on + strand, within B158DRAFT_1591 at 1654.006 kb on - strand, within B158DRAFT_1591 at 1654.006 kb on - strand, within B158DRAFT_1591 at 1654.034 kb on + strand, within B158DRAFT_1591 at 1654.161 kb on - strand, within B158DRAFT_1591 at 1654.203 kb on - strand, within B158DRAFT_1591 at 1654.209 kb on + strand, within B158DRAFT_1591 at 1654.231 kb on - strand at 1654.244 kb on + strand at 1654.278 kb on + strand at 1654.286 kb on - strand at 1654.344 kb on + strand at 1654.358 kb on - strand at 1654.360 kb on + strand at 1654.360 kb on + strand at 1654.365 kb on + strand at 1654.365 kb on + strand at 1654.365 kb on + strand at 1654.368 kb on - strand at 1654.368 kb on - strand at 1654.373 kb on - strand at 1654.373 kb on - strand at 1654.373 kb on - strand at 1654.373 kb on - strand at 1654.373 kb on - strand at 1654.375 kb on + strand at 1654.383 kb on - strand at 1654.411 kb on + strand at 1654.416 kb on + strand at 1654.416 kb on - strand at 1654.419 kb on - strand at 1654.458 kb on + strand at 1654.458 kb on + strand at 1654.458 kb on + strand at 1654.519 kb on + strand at 1654.527 kb on - strand at 1654.539 kb on - strand at 1654.586 kb on - strand at 1654.610 kb on + strand, within B158DRAFT_1592 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.680 kb on + strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.688 kb on - strand, within B158DRAFT_1592 at 1654.789 kb on - strand, within B158DRAFT_1592 at 1654.832 kb on - strand, within B158DRAFT_1592 at 1655.008 kb on - strand, within B158DRAFT_1592 at 1655.151 kb on + strand at 1655.159 kb on - strand at 1655.163 kb on + strand at 1655.164 kb on - strand at 1655.168 kb on + strand at 1655.173 kb on + strand at 1655.258 kb on + strand, within B158DRAFT_1593 at 1655.286 kb on + strand, within B158DRAFT_1593 at 1655.333 kb on + strand, within B158DRAFT_1593 at 1655.347 kb on + strand, within B158DRAFT_1593 at 1655.350 kb on - strand, within B158DRAFT_1593 at 1655.355 kb on - strand, within B158DRAFT_1593 at 1655.355 kb on - strand, within B158DRAFT_1593 at 1655.355 kb on - strand, within B158DRAFT_1593 at 1655.378 kb on + strand, within B158DRAFT_1593 at 1655.388 kb on + strand, within B158DRAFT_1593 at 1655.389 kb on + strand, within B158DRAFT_1593 at 1655.389 kb on + strand, within B158DRAFT_1593 at 1655.396 kb on - strand, within B158DRAFT_1593 at 1655.397 kb on - strand, within B158DRAFT_1593 at 1655.477 kb on - strand at 1655.531 kb on + strand at 1655.548 kb on + strand at 1655.556 kb on - strand at 1655.606 kb on + strand at 1655.614 kb on - strand at 1655.762 kb on - strand, within B158DRAFT_1594 at 1655.780 kb on + strand, within B158DRAFT_1594 at 1655.790 kb on + strand, within B158DRAFT_1594 at 1655.803 kb on - strand, within B158DRAFT_1594 at 1655.859 kb on - strand at 1655.859 kb on - strand at 1656.032 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM remove 1,653,597 - B158DRAFT_1591 0.63 -0.5 1,653,597 - B158DRAFT_1591 0.63 -0.0 1,653,605 - B158DRAFT_1591 0.64 -1.0 1,653,667 + B158DRAFT_1591 0.66 -0.6 1,653,667 + B158DRAFT_1591 0.66 -0.3 1,653,670 - B158DRAFT_1591 0.66 -1.6 1,653,720 + B158DRAFT_1591 0.69 +0.5 1,653,725 + B158DRAFT_1591 0.69 +0.7 1,653,777 + B158DRAFT_1591 0.71 -0.8 1,653,777 + B158DRAFT_1591 0.71 +0.4 1,653,777 + B158DRAFT_1591 0.71 -0.6 1,653,785 - B158DRAFT_1591 0.71 +0.4 1,653,785 - B158DRAFT_1591 0.71 +0.1 1,653,785 - B158DRAFT_1591 0.71 -0.4 1,653,785 - B158DRAFT_1591 0.71 -1.1 1,653,787 + B158DRAFT_1591 0.71 -0.7 1,653,792 + B158DRAFT_1591 0.72 -0.8 1,653,795 - B158DRAFT_1591 0.72 -0.9 1,653,800 - B158DRAFT_1591 0.72 -0.2 1,653,827 + B158DRAFT_1591 0.73 +1.0 1,653,835 - B158DRAFT_1591 0.74 -0.2 1,653,835 - B158DRAFT_1591 0.74 +0.4 1,653,835 - B158DRAFT_1591 0.74 -1.1 1,653,842 - B158DRAFT_1591 0.74 -1.7 1,653,859 + B158DRAFT_1591 0.75 -0.8 1,653,879 + B158DRAFT_1591 0.75 +1.1 1,653,879 + B158DRAFT_1591 0.75 -0.8 1,653,887 - B158DRAFT_1591 0.76 -2.5 1,653,887 - B158DRAFT_1591 0.76 -0.0 1,653,974 + B158DRAFT_1591 0.79 +1.1 1,653,991 + B158DRAFT_1591 0.80 +0.9 1,653,998 + B158DRAFT_1591 0.80 -0.4 1,653,998 + B158DRAFT_1591 0.80 -2.1 1,654,006 - B158DRAFT_1591 0.81 -0.9 1,654,006 - B158DRAFT_1591 0.81 +0.2 1,654,034 + B158DRAFT_1591 0.82 +0.2 1,654,161 - B158DRAFT_1591 0.87 -1.7 1,654,203 - B158DRAFT_1591 0.89 +1.3 1,654,209 + B158DRAFT_1591 0.89 +0.5 1,654,231 - -0.2 1,654,244 + -2.0 1,654,278 + +1.1 1,654,286 - -0.8 1,654,344 + +0.3 1,654,358 - +1.8 1,654,360 + +0.4 1,654,360 + +0.5 1,654,365 + -1.9 1,654,365 + -0.0 1,654,365 + +0.6 1,654,368 - -0.8 1,654,368 - -0.9 1,654,373 - -3.0 1,654,373 - -1.9 1,654,373 - -0.6 1,654,373 - -0.2 1,654,373 - +2.1 1,654,375 + +1.1 1,654,383 - -0.3 1,654,411 + +1.0 1,654,416 + +0.6 1,654,416 - -0.1 1,654,419 - -3.1 1,654,458 + +0.3 1,654,458 + -0.5 1,654,458 + -0.5 1,654,519 + -2.6 1,654,527 - +0.3 1,654,539 - -0.1 1,654,586 - +1.0 1,654,610 + B158DRAFT_1592 0.11 -0.2 1,654,680 + B158DRAFT_1592 0.24 -0.7 1,654,680 + B158DRAFT_1592 0.24 -1.3 1,654,680 + B158DRAFT_1592 0.24 -0.9 1,654,680 + B158DRAFT_1592 0.24 -0.1 1,654,688 - B158DRAFT_1592 0.25 -1.3 1,654,688 - B158DRAFT_1592 0.25 -2.0 1,654,688 - B158DRAFT_1592 0.25 -0.2 1,654,688 - B158DRAFT_1592 0.25 +0.2 1,654,789 - B158DRAFT_1592 0.43 -0.1 1,654,832 - B158DRAFT_1592 0.51 -0.8 1,655,008 - B158DRAFT_1592 0.82 -0.2 1,655,151 + +0.4 1,655,159 - -0.6 1,655,163 + +0.0 1,655,164 - -1.5 1,655,168 + +0.4 1,655,173 + -3.2 1,655,258 + B158DRAFT_1593 0.33 +0.1 1,655,286 + B158DRAFT_1593 0.44 +0.8 1,655,333 + B158DRAFT_1593 0.63 +1.4 1,655,347 + B158DRAFT_1593 0.69 +2.9 1,655,350 - B158DRAFT_1593 0.70 -0.6 1,655,355 - B158DRAFT_1593 0.72 -0.5 1,655,355 - B158DRAFT_1593 0.72 -0.3 1,655,355 - B158DRAFT_1593 0.72 -0.5 1,655,378 + B158DRAFT_1593 0.81 -1.6 1,655,388 + B158DRAFT_1593 0.85 +0.3 1,655,389 + B158DRAFT_1593 0.86 +0.4 1,655,389 + B158DRAFT_1593 0.86 +0.3 1,655,396 - B158DRAFT_1593 0.89 -0.9 1,655,397 - B158DRAFT_1593 0.89 -2.7 1,655,477 - -0.7 1,655,531 + +0.1 1,655,548 + +0.1 1,655,556 - -0.7 1,655,606 + -0.3 1,655,614 - -0.7 1,655,762 - B158DRAFT_1594 0.49 +0.3 1,655,780 + B158DRAFT_1594 0.57 +0.6 1,655,790 + B158DRAFT_1594 0.62 -1.7 1,655,803 - B158DRAFT_1594 0.68 -0.7 1,655,859 - -1.1 1,655,859 - +0.3 1,656,032 + -0.9
Or see this region's nucleotide sequence