Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1589

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1588 and B158DRAFT_1589 overlap by 8 nucleotidesB158DRAFT_1589 and B158DRAFT_1590 are separated by 441 nucleotides B158DRAFT_1588: B158DRAFT_1588 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 1,649,054 to 1,650,298 _1588 B158DRAFT_1589: B158DRAFT_1589 - lipoprotein releasing system, ATP-binding protein, at 1,650,291 to 1,650,977 _1589 B158DRAFT_1590: B158DRAFT_1590 - Uncharacterized protein conserved in bacteria, at 1,651,419 to 1,652,066 _1590 Position (kb) 1650 1651Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10at 1651.033 kb on + strandat 1651.033 kb on + strandat 1651.033 kb on + strandat 1651.033 kb on + strandat 1651.041 kb on - strandat 1651.041 kb on - strandat 1651.041 kb on - strandat 1651.041 kb on - strandat 1651.304 kb on + strandat 1651.362 kb on + strandat 1651.362 kb on + strandat 1651.362 kb on + strandat 1651.362 kb on + strandat 1651.370 kb on - strandat 1651.387 kb on + strandat 1651.395 kb on - strandat 1651.395 kb on - strandat 1651.527 kb on + strand, within B158DRAFT_1590at 1651.563 kb on + strand, within B158DRAFT_1590at 1651.571 kb on - strand, within B158DRAFT_1590at 1651.600 kb on + strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.721 kb on + strand, within B158DRAFT_1590at 1651.724 kb on - strand, within B158DRAFT_1590at 1651.729 kb on - strand, within B158DRAFT_1590at 1651.729 kb on - strand, within B158DRAFT_1590at 1651.729 kb on - strand, within B158DRAFT_1590at 1651.740 kb on + strand, within B158DRAFT_1590at 1651.750 kb on - strand, within B158DRAFT_1590at 1651.750 kb on - strand, within B158DRAFT_1590at 1651.750 kb on - strand, within B158DRAFT_1590at 1651.752 kb on - strand, within B158DRAFT_1590at 1651.762 kb on - strand, within B158DRAFT_1590at 1651.780 kb on + strand, within B158DRAFT_1590at 1651.862 kb on - strand, within B158DRAFT_1590at 1651.917 kb on - strand, within B158DRAFT_1590at 1651.945 kb on + strand, within B158DRAFT_1590at 1651.953 kb on - strand, within B158DRAFT_1590

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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1,651,033 + -0.6
1,651,033 + -0.5
1,651,033 + +0.1
1,651,033 + -0.1
1,651,041 - +1.9
1,651,041 - +1.1
1,651,041 - +0.2
1,651,041 - -1.7
1,651,304 + +0.1
1,651,362 + -1.9
1,651,362 + -1.4
1,651,362 + -0.4
1,651,362 + +1.9
1,651,370 - +0.3
1,651,387 + -3.2
1,651,395 - -2.4
1,651,395 - +0.4
1,651,527 + B158DRAFT_1590 0.17 +10.4
1,651,563 + B158DRAFT_1590 0.22 +9.2
1,651,571 - B158DRAFT_1590 0.23 +10.2
1,651,600 + B158DRAFT_1590 0.28 +8.2
1,651,608 - B158DRAFT_1590 0.29 +7.8
1,651,608 - B158DRAFT_1590 0.29 +8.1
1,651,608 - B158DRAFT_1590 0.29 +8.2
1,651,608 - B158DRAFT_1590 0.29 +7.9
1,651,608 - B158DRAFT_1590 0.29 +7.8
1,651,608 - B158DRAFT_1590 0.29 +8.1
1,651,610 + B158DRAFT_1590 0.29 +8.1
1,651,610 + B158DRAFT_1590 0.29 +8.0
1,651,610 + B158DRAFT_1590 0.29 +8.4
1,651,610 + B158DRAFT_1590 0.29 +8.0
1,651,610 + B158DRAFT_1590 0.29 +7.9
1,651,610 + B158DRAFT_1590 0.29 +8.1
1,651,610 + B158DRAFT_1590 0.29 +8.1
1,651,610 + B158DRAFT_1590 0.29 +8.2
1,651,610 + B158DRAFT_1590 0.29 +8.0
1,651,610 + B158DRAFT_1590 0.29 +8.0
1,651,610 + B158DRAFT_1590 0.29 +7.6
1,651,618 - B158DRAFT_1590 0.31 +8.5
1,651,618 - B158DRAFT_1590 0.31 +8.5
1,651,618 - B158DRAFT_1590 0.31 +8.1
1,651,618 - B158DRAFT_1590 0.31 +8.2
1,651,618 - B158DRAFT_1590 0.31 +7.8
1,651,721 + B158DRAFT_1590 0.47 +8.3
1,651,724 - B158DRAFT_1590 0.47 +8.2
1,651,729 - B158DRAFT_1590 0.48 +8.0
1,651,729 - B158DRAFT_1590 0.48 +8.2
1,651,729 - B158DRAFT_1590 0.48 +8.1
1,651,740 + B158DRAFT_1590 0.50 +8.2
1,651,750 - B158DRAFT_1590 0.51 +8.2
1,651,750 - B158DRAFT_1590 0.51 +8.1
1,651,750 - B158DRAFT_1590 0.51 +8.1
1,651,752 - B158DRAFT_1590 0.51 +8.1
1,651,762 - B158DRAFT_1590 0.53 +8.2
1,651,780 + B158DRAFT_1590 0.56 +7.9
1,651,862 - B158DRAFT_1590 0.68 +8.2
1,651,917 - B158DRAFT_1590 0.77 +7.9
1,651,945 + B158DRAFT_1590 0.81 +7.8
1,651,953 - B158DRAFT_1590 0.82 +8.3

Or see this region's nucleotide sequence