Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1439

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1438 and B158DRAFT_1439 overlap by 29 nucleotidesB158DRAFT_1439 and B158DRAFT_1440 overlap by 4 nucleotides B158DRAFT_1438: B158DRAFT_1438 - formiminoglutamate deiminase, at 1,489,694 to 1,491,103 _1438 B158DRAFT_1439: B158DRAFT_1439 - hypothetical protein, at 1,491,075 to 1,492,811 _1439 B158DRAFT_1440: B158DRAFT_1440 - ABC-type uncharacterized transport system, periplasmic component, at 1,492,808 to 1,493,821 _1440 Position (kb) 1491 1492 1493Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1490.120 kb on + strand, within B158DRAFT_1438at 1490.322 kb on + strand, within B158DRAFT_1438at 1490.322 kb on + strand, within B158DRAFT_1438at 1490.328 kb on - strand, within B158DRAFT_1438at 1490.360 kb on + strand, within B158DRAFT_1438at 1490.360 kb on + strand, within B158DRAFT_1438at 1490.360 kb on + strand, within B158DRAFT_1438at 1490.368 kb on - strand, within B158DRAFT_1438at 1490.381 kb on + strand, within B158DRAFT_1438at 1490.381 kb on - strand, within B158DRAFT_1438at 1490.391 kb on - strand, within B158DRAFT_1438at 1490.393 kb on + strand, within B158DRAFT_1438at 1490.444 kb on + strand, within B158DRAFT_1438at 1490.462 kb on - strand, within B158DRAFT_1438at 1490.473 kb on + strand, within B158DRAFT_1438at 1490.480 kb on + strand, within B158DRAFT_1438at 1490.481 kb on - strand, within B158DRAFT_1438at 1490.483 kb on - strand, within B158DRAFT_1438at 1490.505 kb on + strand, within B158DRAFT_1438at 1490.537 kb on + strand, within B158DRAFT_1438at 1490.555 kb on - strand, within B158DRAFT_1438at 1490.657 kb on + strand, within B158DRAFT_1438at 1490.722 kb on - strand, within B158DRAFT_1438at 1490.724 kb on + strand, within B158DRAFT_1438at 1490.724 kb on + strand, within B158DRAFT_1438at 1490.732 kb on - strand, within B158DRAFT_1438at 1490.732 kb on - strand, within B158DRAFT_1438at 1490.804 kb on - strand, within B158DRAFT_1438at 1490.893 kb on + strand, within B158DRAFT_1438at 1490.901 kb on - strand, within B158DRAFT_1438at 1491.120 kb on - strandat 1491.130 kb on - strandat 1491.130 kb on - strandat 1491.464 kb on + strand, within B158DRAFT_1439at 1491.464 kb on + strand, within B158DRAFT_1439at 1491.472 kb on - strand, within B158DRAFT_1439at 1491.472 kb on - strand, within B158DRAFT_1439at 1491.478 kb on + strand, within B158DRAFT_1439at 1491.743 kb on - strand, within B158DRAFT_1439at 1491.769 kb on + strand, within B158DRAFT_1439at 1491.769 kb on + strand, within B158DRAFT_1439at 1491.777 kb on - strand, within B158DRAFT_1439at 1491.777 kb on - strand, within B158DRAFT_1439at 1491.777 kb on - strand, within B158DRAFT_1439at 1491.784 kb on - strand, within B158DRAFT_1439at 1491.859 kb on + strand, within B158DRAFT_1439at 1491.859 kb on + strand, within B158DRAFT_1439at 1491.909 kb on + strand, within B158DRAFT_1439at 1491.924 kb on - strand, within B158DRAFT_1439at 1491.977 kb on + strand, within B158DRAFT_1439at 1491.987 kb on - strand, within B158DRAFT_1439at 1492.044 kb on + strand, within B158DRAFT_1439at 1492.078 kb on + strand, within B158DRAFT_1439at 1492.086 kb on - strand, within B158DRAFT_1439at 1492.086 kb on - strand, within B158DRAFT_1439at 1492.091 kb on - strand, within B158DRAFT_1439at 1492.092 kb on - strand, within B158DRAFT_1439at 1492.171 kb on + strand, within B158DRAFT_1439at 1492.192 kb on + strand, within B158DRAFT_1439at 1492.194 kb on - strand, within B158DRAFT_1439at 1492.341 kb on - strand, within B158DRAFT_1439at 1492.350 kb on + strand, within B158DRAFT_1439at 1492.355 kb on + strand, within B158DRAFT_1439at 1492.363 kb on - strand, within B158DRAFT_1439at 1492.363 kb on - strand, within B158DRAFT_1439at 1492.363 kb on - strand, within B158DRAFT_1439at 1492.363 kb on - strand, within B158DRAFT_1439at 1492.438 kb on - strand, within B158DRAFT_1439at 1492.725 kb on - strandat 1492.875 kb on - strandat 1492.875 kb on - strandat 1492.918 kb on + strand, within B158DRAFT_1440at 1492.920 kb on - strand, within B158DRAFT_1440at 1492.944 kb on - strand, within B158DRAFT_1440at 1493.039 kb on + strand, within B158DRAFT_1440at 1493.127 kb on - strand, within B158DRAFT_1440at 1493.127 kb on - strand, within B158DRAFT_1440at 1493.127 kb on - strand, within B158DRAFT_1440at 1493.134 kb on + strand, within B158DRAFT_1440at 1493.267 kb on + strand, within B158DRAFT_1440at 1493.267 kb on + strand, within B158DRAFT_1440at 1493.274 kb on - strand, within B158DRAFT_1440at 1493.275 kb on - strand, within B158DRAFT_1440at 1493.275 kb on - strand, within B158DRAFT_1440at 1493.358 kb on + strand, within B158DRAFT_1440at 1493.429 kb on + strand, within B158DRAFT_1440at 1493.437 kb on - strand, within B158DRAFT_1440at 1493.437 kb on - strand, within B158DRAFT_1440at 1493.472 kb on - strand, within B158DRAFT_1440at 1493.474 kb on + strand, within B158DRAFT_1440at 1493.496 kb on - strand, within B158DRAFT_1440at 1493.496 kb on - strand, within B158DRAFT_1440at 1493.508 kb on + strand, within B158DRAFT_1440at 1493.602 kb on + strand, within B158DRAFT_1440at 1493.680 kb on - strand, within B158DRAFT_1440at 1493.680 kb on - strand, within B158DRAFT_1440at 1493.680 kb on - strand, within B158DRAFT_1440at 1493.772 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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1,490,120 + B158DRAFT_1438 0.30 -0.1
1,490,322 + B158DRAFT_1438 0.45 -0.7
1,490,322 + B158DRAFT_1438 0.45 -0.7
1,490,328 - B158DRAFT_1438 0.45 -2.6
1,490,360 + B158DRAFT_1438 0.47 -1.7
1,490,360 + B158DRAFT_1438 0.47 -0.2
1,490,360 + B158DRAFT_1438 0.47 +0.7
1,490,368 - B158DRAFT_1438 0.48 -0.5
1,490,381 + B158DRAFT_1438 0.49 -3.0
1,490,381 - B158DRAFT_1438 0.49 -1.0
1,490,391 - B158DRAFT_1438 0.49 -0.4
1,490,393 + B158DRAFT_1438 0.50 -3.3
1,490,444 + B158DRAFT_1438 0.53 -0.9
1,490,462 - B158DRAFT_1438 0.54 -2.3
1,490,473 + B158DRAFT_1438 0.55 +2.0
1,490,480 + B158DRAFT_1438 0.56 -0.3
1,490,481 - B158DRAFT_1438 0.56 -0.6
1,490,483 - B158DRAFT_1438 0.56 -0.2
1,490,505 + B158DRAFT_1438 0.58 -0.2
1,490,537 + B158DRAFT_1438 0.60 -0.1
1,490,555 - B158DRAFT_1438 0.61 -1.0
1,490,657 + B158DRAFT_1438 0.68 -1.3
1,490,722 - B158DRAFT_1438 0.73 -0.7
1,490,724 + B158DRAFT_1438 0.73 -0.2
1,490,724 + B158DRAFT_1438 0.73 +0.2
1,490,732 - B158DRAFT_1438 0.74 -0.5
1,490,732 - B158DRAFT_1438 0.74 -0.6
1,490,804 - B158DRAFT_1438 0.79 -1.8
1,490,893 + B158DRAFT_1438 0.85 -0.4
1,490,901 - B158DRAFT_1438 0.86 -0.6
1,491,120 - -1.7
1,491,130 - -1.7
1,491,130 - -0.9
1,491,464 + B158DRAFT_1439 0.22 -0.6
1,491,464 + B158DRAFT_1439 0.22 -0.1
1,491,472 - B158DRAFT_1439 0.23 -0.5
1,491,472 - B158DRAFT_1439 0.23 -0.4
1,491,478 + B158DRAFT_1439 0.23 -0.6
1,491,743 - B158DRAFT_1439 0.38 -1.9
1,491,769 + B158DRAFT_1439 0.40 +0.6
1,491,769 + B158DRAFT_1439 0.40 +1.1
1,491,777 - B158DRAFT_1439 0.40 +0.5
1,491,777 - B158DRAFT_1439 0.40 -0.8
1,491,777 - B158DRAFT_1439 0.40 +0.9
1,491,784 - B158DRAFT_1439 0.41 -0.6
1,491,859 + B158DRAFT_1439 0.45 -1.0
1,491,859 + B158DRAFT_1439 0.45 +0.6
1,491,909 + B158DRAFT_1439 0.48 -0.2
1,491,924 - B158DRAFT_1439 0.49 +0.2
1,491,977 + B158DRAFT_1439 0.52 -0.6
1,491,987 - B158DRAFT_1439 0.53 +1.9
1,492,044 + B158DRAFT_1439 0.56 -0.4
1,492,078 + B158DRAFT_1439 0.58 -0.2
1,492,086 - B158DRAFT_1439 0.58 +0.1
1,492,086 - B158DRAFT_1439 0.58 +0.2
1,492,091 - B158DRAFT_1439 0.58 -1.1
1,492,092 - B158DRAFT_1439 0.59 -1.5
1,492,171 + B158DRAFT_1439 0.63 -0.2
1,492,192 + B158DRAFT_1439 0.64 -2.3
1,492,194 - B158DRAFT_1439 0.64 +0.9
1,492,341 - B158DRAFT_1439 0.73 -0.0
1,492,350 + B158DRAFT_1439 0.73 +0.3
1,492,355 + B158DRAFT_1439 0.74 -1.5
1,492,363 - B158DRAFT_1439 0.74 +0.2
1,492,363 - B158DRAFT_1439 0.74 +0.1
1,492,363 - B158DRAFT_1439 0.74 -0.1
1,492,363 - B158DRAFT_1439 0.74 +0.1
1,492,438 - B158DRAFT_1439 0.78 -1.4
1,492,725 - -1.3
1,492,875 - -2.1
1,492,875 - -1.3
1,492,918 + B158DRAFT_1440 0.11 -1.1
1,492,920 - B158DRAFT_1440 0.11 -1.3
1,492,944 - B158DRAFT_1440 0.13 +0.6
1,493,039 + B158DRAFT_1440 0.23 -0.3
1,493,127 - B158DRAFT_1440 0.31 -0.0
1,493,127 - B158DRAFT_1440 0.31 +1.0
1,493,127 - B158DRAFT_1440 0.31 -0.9
1,493,134 + B158DRAFT_1440 0.32 -0.9
1,493,267 + B158DRAFT_1440 0.45 -2.0
1,493,267 + B158DRAFT_1440 0.45 +0.4
1,493,274 - B158DRAFT_1440 0.46 -0.3
1,493,275 - B158DRAFT_1440 0.46 +0.2
1,493,275 - B158DRAFT_1440 0.46 +0.3
1,493,358 + B158DRAFT_1440 0.54 -0.6
1,493,429 + B158DRAFT_1440 0.61 -3.1
1,493,437 - B158DRAFT_1440 0.62 +1.6
1,493,437 - B158DRAFT_1440 0.62 -1.9
1,493,472 - B158DRAFT_1440 0.65 -0.2
1,493,474 + B158DRAFT_1440 0.66 -0.5
1,493,496 - B158DRAFT_1440 0.68 -1.2
1,493,496 - B158DRAFT_1440 0.68 -1.1
1,493,508 + B158DRAFT_1440 0.69 -0.6
1,493,602 + B158DRAFT_1440 0.78 +1.3
1,493,680 - B158DRAFT_1440 0.86 -2.2
1,493,680 - B158DRAFT_1440 0.86 -0.2
1,493,680 - B158DRAFT_1440 0.86 -2.5
1,493,772 + +0.4

Or see this region's nucleotide sequence