Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1113

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1112 and B158DRAFT_1113 are separated by 9 nucleotidesB158DRAFT_1113 and B158DRAFT_1114 are separated by 4 nucleotides B158DRAFT_1112: B158DRAFT_1112 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit, at 1,148,804 to 1,149,763 _1112 B158DRAFT_1113: B158DRAFT_1113 - tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain, at 1,149,773 to 1,151,047 _1113 B158DRAFT_1114: B158DRAFT_1114 - S-adenosylhomocysteine hydrolase, at 1,151,052 to 1,152,107 _1114 Position (kb) 1149 1150 1151 1152Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1151.094 kb on - strandat 1151.480 kb on + strand, within B158DRAFT_1114at 1151.480 kb on + strand, within B158DRAFT_1114at 1151.488 kb on - strand, within B158DRAFT_1114at 1151.538 kb on + strand, within B158DRAFT_1114at 1151.546 kb on - strand, within B158DRAFT_1114at 1151.546 kb on - strand, within B158DRAFT_1114at 1151.556 kb on - strand, within B158DRAFT_1114at 1151.618 kb on + strand, within B158DRAFT_1114at 1151.638 kb on - strand, within B158DRAFT_1114at 1151.655 kb on - strand, within B158DRAFT_1114at 1151.655 kb on - strand, within B158DRAFT_1114at 1151.728 kb on - strand, within B158DRAFT_1114at 1151.730 kb on + strand, within B158DRAFT_1114at 1151.773 kb on + strand, within B158DRAFT_1114at 1151.827 kb on + strand, within B158DRAFT_1114at 1151.835 kb on - strand, within B158DRAFT_1114at 1151.914 kb on - strand, within B158DRAFT_1114at 1151.928 kb on + strand, within B158DRAFT_1114at 1151.928 kb on + strand, within B158DRAFT_1114at 1151.928 kb on + strand, within B158DRAFT_1114at 1151.928 kb on + strand, within B158DRAFT_1114at 1151.928 kb on + strand, within B158DRAFT_1114at 1151.949 kb on - strand, within B158DRAFT_1114at 1152.009 kb on + strandat 1152.042 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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1,151,094 - -3.0
1,151,480 + B158DRAFT_1114 0.41 -3.1
1,151,480 + B158DRAFT_1114 0.41 -0.9
1,151,488 - B158DRAFT_1114 0.41 +1.7
1,151,538 + B158DRAFT_1114 0.46 -1.4
1,151,546 - B158DRAFT_1114 0.47 +0.4
1,151,546 - B158DRAFT_1114 0.47 -0.0
1,151,556 - B158DRAFT_1114 0.48 -4.5
1,151,618 + B158DRAFT_1114 0.54 -2.9
1,151,638 - B158DRAFT_1114 0.55 -0.8
1,151,655 - B158DRAFT_1114 0.57 -1.4
1,151,655 - B158DRAFT_1114 0.57 -0.3
1,151,728 - B158DRAFT_1114 0.64 -0.6
1,151,730 + B158DRAFT_1114 0.64 -0.3
1,151,773 + B158DRAFT_1114 0.68 -0.7
1,151,827 + B158DRAFT_1114 0.73 +0.3
1,151,835 - B158DRAFT_1114 0.74 -0.4
1,151,914 - B158DRAFT_1114 0.82 -1.1
1,151,928 + B158DRAFT_1114 0.83 -0.3
1,151,928 + B158DRAFT_1114 0.83 +0.0
1,151,928 + B158DRAFT_1114 0.83 -1.5
1,151,928 + B158DRAFT_1114 0.83 +2.2
1,151,928 + B158DRAFT_1114 0.83 +1.2
1,151,949 - B158DRAFT_1114 0.85 -1.8
1,152,009 + -2.1
1,152,042 + -0.1

Or see this region's nucleotide sequence