Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0993

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0991 and B158DRAFT_0992 overlap by 4 nucleotidesB158DRAFT_0992 and B158DRAFT_0993 are separated by 30 nucleotidesB158DRAFT_0993 and B158DRAFT_0994 are separated by 354 nucleotides B158DRAFT_0991: B158DRAFT_0991 - ABC-type multidrug transport system, ATPase component, at 1,024,867 to 1,025,724 _0991 B158DRAFT_0992: B158DRAFT_0992 - hypothetical protein, at 1,025,721 to 1,026,677 _0992 B158DRAFT_0993: B158DRAFT_0993 - hypothetical protein, at 1,026,708 to 1,026,887 _0993 B158DRAFT_0994: B158DRAFT_0994 - putative adhesin (DUF1302) (from data), at 1,027,242 to 1,029,155 _0994 Position (kb) 1026 1027Strain fitness (log2 ratio) -2 -1 0 1 2at 1025.728 kb on - strandat 1025.730 kb on + strandat 1025.730 kb on + strandat 1025.730 kb on + strandat 1025.738 kb on - strandat 1025.780 kb on - strandat 1025.780 kb on - strandat 1025.813 kb on + strandat 1025.838 kb on + strand, within B158DRAFT_0992at 1025.856 kb on + strand, within B158DRAFT_0992at 1025.861 kb on + strand, within B158DRAFT_0992at 1025.869 kb on - strand, within B158DRAFT_0992at 1025.878 kb on + strand, within B158DRAFT_0992at 1025.917 kb on + strand, within B158DRAFT_0992at 1025.917 kb on + strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.932 kb on - strand, within B158DRAFT_0992at 1025.954 kb on - strand, within B158DRAFT_0992at 1026.159 kb on - strand, within B158DRAFT_0992at 1026.166 kb on - strand, within B158DRAFT_0992at 1026.210 kb on - strand, within B158DRAFT_0992at 1026.288 kb on - strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.304 kb on - strand, within B158DRAFT_0992at 1026.304 kb on - strand, within B158DRAFT_0992at 1026.304 kb on - strand, within B158DRAFT_0992at 1026.309 kb on - strand, within B158DRAFT_0992at 1026.413 kb on + strand, within B158DRAFT_0992at 1026.415 kb on + strand, within B158DRAFT_0992at 1026.421 kb on - strand, within B158DRAFT_0992at 1026.432 kb on + strand, within B158DRAFT_0992at 1026.440 kb on - strand, within B158DRAFT_0992at 1026.461 kb on + strand, within B158DRAFT_0992at 1026.471 kb on + strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.551 kb on + strand, within B158DRAFT_0992at 1026.559 kb on - strand, within B158DRAFT_0992at 1026.561 kb on + strand, within B158DRAFT_0992at 1026.569 kb on - strand, within B158DRAFT_0992at 1026.602 kb on - strandat 1026.625 kb on + strandat 1026.647 kb on + strandat 1026.647 kb on + strandat 1026.647 kb on + strandat 1026.655 kb on - strandat 1026.680 kb on - strandat 1026.690 kb on + strandat 1026.697 kb on + strandat 1026.745 kb on + strand, within B158DRAFT_0993at 1026.782 kb on - strand, within B158DRAFT_0993at 1026.784 kb on - strand, within B158DRAFT_0993at 1026.825 kb on + strand, within B158DRAFT_0993at 1026.836 kb on + strand, within B158DRAFT_0993at 1026.857 kb on + strand, within B158DRAFT_0993at 1026.935 kb on + strandat 1026.943 kb on - strandat 1026.996 kb on - strandat 1027.013 kb on + strandat 1027.075 kb on + strandat 1027.204 kb on - strandat 1027.254 kb on + strandat 1027.262 kb on - strandat 1027.262 kb on - strandat 1027.262 kb on - strandat 1027.342 kb on - strandat 1027.444 kb on + strand, within B158DRAFT_0994at 1027.508 kb on + strand, within B158DRAFT_0994at 1027.530 kb on - strand, within B158DRAFT_0994at 1027.530 kb on - strand, within B158DRAFT_0994at 1027.536 kb on + strand, within B158DRAFT_0994at 1027.536 kb on + strand, within B158DRAFT_0994at 1027.631 kb on + strand, within B158DRAFT_0994at 1027.631 kb on + strand, within B158DRAFT_0994at 1027.631 kb on + strand, within B158DRAFT_0994at 1027.648 kb on + strand, within B158DRAFT_0994at 1027.648 kb on + strand, within B158DRAFT_0994at 1027.648 kb on + strand, within B158DRAFT_0994at 1027.678 kb on + strand, within B158DRAFT_0994at 1027.678 kb on + strand, within B158DRAFT_0994at 1027.686 kb on - strand, within B158DRAFT_0994at 1027.717 kb on + strand, within B158DRAFT_0994at 1027.741 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.751 kb on + strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.759 kb on - strand, within B158DRAFT_0994at 1027.834 kb on + strand, within B158DRAFT_0994at 1027.850 kb on - strand, within B158DRAFT_0994at 1027.864 kb on + strand, within B158DRAFT_0994at 1027.864 kb on + strand, within B158DRAFT_0994

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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1,025,728 - -0.7
1,025,730 + +0.6
1,025,730 + -1.3
1,025,730 + +0.6
1,025,738 - +0.3
1,025,780 - -0.8
1,025,780 - -1.3
1,025,813 + -0.3
1,025,838 + B158DRAFT_0992 0.12 -0.5
1,025,856 + B158DRAFT_0992 0.14 +1.0
1,025,861 + B158DRAFT_0992 0.15 +0.2
1,025,869 - B158DRAFT_0992 0.15 -0.8
1,025,878 + B158DRAFT_0992 0.16 -0.3
1,025,917 + B158DRAFT_0992 0.20 -0.3
1,025,917 + B158DRAFT_0992 0.20 -1.1
1,025,925 - B158DRAFT_0992 0.21 +0.7
1,025,925 - B158DRAFT_0992 0.21 -1.8
1,025,925 - B158DRAFT_0992 0.21 +0.7
1,025,925 - B158DRAFT_0992 0.21 -1.0
1,025,925 - B158DRAFT_0992 0.21 +0.2
1,025,925 - B158DRAFT_0992 0.21 -1.6
1,025,925 - B158DRAFT_0992 0.21 -0.3
1,025,932 - B158DRAFT_0992 0.22 +0.4
1,025,954 - B158DRAFT_0992 0.24 -0.0
1,026,159 - B158DRAFT_0992 0.46 -0.9
1,026,166 - B158DRAFT_0992 0.46 -1.3
1,026,210 - B158DRAFT_0992 0.51 -1.4
1,026,288 - B158DRAFT_0992 0.59 +0.8
1,026,296 + B158DRAFT_0992 0.60 -0.6
1,026,296 + B158DRAFT_0992 0.60 -0.8
1,026,296 + B158DRAFT_0992 0.60 -1.3
1,026,296 + B158DRAFT_0992 0.60 -0.5
1,026,296 + B158DRAFT_0992 0.60 -0.5
1,026,304 - B158DRAFT_0992 0.61 -1.9
1,026,304 - B158DRAFT_0992 0.61 -0.1
1,026,304 - B158DRAFT_0992 0.61 -1.9
1,026,309 - B158DRAFT_0992 0.61 -0.4
1,026,413 + B158DRAFT_0992 0.72 +0.7
1,026,415 + B158DRAFT_0992 0.73 -1.8
1,026,421 - B158DRAFT_0992 0.73 +0.9
1,026,432 + B158DRAFT_0992 0.74 -0.2
1,026,440 - B158DRAFT_0992 0.75 -0.3
1,026,461 + B158DRAFT_0992 0.77 -1.3
1,026,471 + B158DRAFT_0992 0.78 -0.9
1,026,479 - B158DRAFT_0992 0.79 -1.8
1,026,479 - B158DRAFT_0992 0.79 -1.2
1,026,479 - B158DRAFT_0992 0.79 -0.9
1,026,479 - B158DRAFT_0992 0.79 -1.1
1,026,551 + B158DRAFT_0992 0.87 +0.2
1,026,559 - B158DRAFT_0992 0.88 +0.1
1,026,561 + B158DRAFT_0992 0.88 +0.3
1,026,569 - B158DRAFT_0992 0.89 +1.5
1,026,602 - -2.7
1,026,625 + -0.1
1,026,647 + -0.2
1,026,647 + -2.4
1,026,647 + +0.4
1,026,655 - +0.3
1,026,680 - -2.3
1,026,690 + -0.1
1,026,697 + -0.4
1,026,745 + B158DRAFT_0993 0.21 +0.6
1,026,782 - B158DRAFT_0993 0.41 +0.2
1,026,784 - B158DRAFT_0993 0.42 -1.3
1,026,825 + B158DRAFT_0993 0.65 -1.4
1,026,836 + B158DRAFT_0993 0.71 -0.9
1,026,857 + B158DRAFT_0993 0.83 +1.2
1,026,935 + -2.6
1,026,943 - -0.5
1,026,996 - -1.5
1,027,013 + +1.6
1,027,075 + -0.5
1,027,204 - -0.0
1,027,254 + -1.9
1,027,262 - -2.2
1,027,262 - -1.1
1,027,262 - +0.3
1,027,342 - +2.3
1,027,444 + B158DRAFT_0994 0.11 +0.6
1,027,508 + B158DRAFT_0994 0.14 +0.5
1,027,530 - B158DRAFT_0994 0.15 +0.8
1,027,530 - B158DRAFT_0994 0.15 -1.1
1,027,536 + B158DRAFT_0994 0.15 +0.8
1,027,536 + B158DRAFT_0994 0.15 +0.1
1,027,631 + B158DRAFT_0994 0.20 +1.0
1,027,631 + B158DRAFT_0994 0.20 +1.4
1,027,631 + B158DRAFT_0994 0.20 +1.8
1,027,648 + B158DRAFT_0994 0.21 -1.1
1,027,648 + B158DRAFT_0994 0.21 +1.9
1,027,648 + B158DRAFT_0994 0.21 +0.9
1,027,678 + B158DRAFT_0994 0.23 +0.2
1,027,678 + B158DRAFT_0994 0.23 +1.0
1,027,686 - B158DRAFT_0994 0.23 +0.5
1,027,717 + B158DRAFT_0994 0.25 +0.1
1,027,741 + B158DRAFT_0994 0.26 +0.9
1,027,751 + B158DRAFT_0994 0.27 +0.1
1,027,751 + B158DRAFT_0994 0.27 +1.9
1,027,751 + B158DRAFT_0994 0.27 -0.8
1,027,751 + B158DRAFT_0994 0.27 +1.1
1,027,751 + B158DRAFT_0994 0.27 +1.1
1,027,751 + B158DRAFT_0994 0.27 +0.4
1,027,751 + B158DRAFT_0994 0.27 -0.9
1,027,751 + B158DRAFT_0994 0.27 +0.4
1,027,751 + B158DRAFT_0994 0.27 -1.2
1,027,751 + B158DRAFT_0994 0.27 +0.0
1,027,751 + B158DRAFT_0994 0.27 +0.4
1,027,759 - B158DRAFT_0994 0.27 +0.5
1,027,759 - B158DRAFT_0994 0.27 +0.2
1,027,759 - B158DRAFT_0994 0.27 +0.8
1,027,759 - B158DRAFT_0994 0.27 +0.1
1,027,759 - B158DRAFT_0994 0.27 -0.1
1,027,759 - B158DRAFT_0994 0.27 -0.3
1,027,759 - B158DRAFT_0994 0.27 -0.2
1,027,759 - B158DRAFT_0994 0.27 -0.3
1,027,759 - B158DRAFT_0994 0.27 -1.7
1,027,759 - B158DRAFT_0994 0.27 +0.9
1,027,834 + B158DRAFT_0994 0.31 +0.1
1,027,850 - B158DRAFT_0994 0.32 +0.7
1,027,864 + B158DRAFT_0994 0.32 +0.9
1,027,864 + B158DRAFT_0994 0.32 -0.0

Or see this region's nucleotide sequence