Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0915

Experiment: m.b. Chlorite 2.5 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0914 and B158DRAFT_0915 are separated by 53 nucleotidesB158DRAFT_0915 and B158DRAFT_0916 are separated by 28 nucleotidesB158DRAFT_0916 and B158DRAFT_0917 are separated by 161 nucleotides B158DRAFT_0914: B158DRAFT_0914 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 940,219 to 942,651 _0914 B158DRAFT_0915: B158DRAFT_0915 - hypothetical protein, at 942,705 to 943,592 _0915 B158DRAFT_0916: B158DRAFT_0916 - Nitroreductase, at 943,621 to 944,223 _0916 B158DRAFT_0917: B158DRAFT_0917 - Sel1 repeat., at 944,385 to 945,206 _0917 Position (kb) 942 943 944Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 941.728 kb on + strand, within B158DRAFT_0914at 941.735 kb on + strand, within B158DRAFT_0914at 941.742 kb on + strand, within B158DRAFT_0914at 941.743 kb on - strand, within B158DRAFT_0914at 941.747 kb on + strand, within B158DRAFT_0914at 941.757 kb on + strand, within B158DRAFT_0914at 941.765 kb on - strand, within B158DRAFT_0914at 941.765 kb on - strand, within B158DRAFT_0914at 941.765 kb on - strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.844 kb on + strand, within B158DRAFT_0914at 941.852 kb on - strand, within B158DRAFT_0914at 941.852 kb on - strand, within B158DRAFT_0914at 941.852 kb on - strand, within B158DRAFT_0914at 941.864 kb on - strand, within B158DRAFT_0914at 941.874 kb on - strand, within B158DRAFT_0914at 941.925 kb on + strand, within B158DRAFT_0914at 941.933 kb on - strand, within B158DRAFT_0914at 942.008 kb on + strand, within B158DRAFT_0914at 942.013 kb on + strand, within B158DRAFT_0914at 942.013 kb on + strand, within B158DRAFT_0914at 942.013 kb on + strand, within B158DRAFT_0914at 942.013 kb on + strand, within B158DRAFT_0914at 942.013 kb on + strand, within B158DRAFT_0914at 942.013 kb on + strand, within B158DRAFT_0914at 942.016 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.021 kb on - strand, within B158DRAFT_0914at 942.036 kb on - strand, within B158DRAFT_0914at 942.057 kb on - strand, within B158DRAFT_0914at 942.067 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.072 kb on + strand, within B158DRAFT_0914at 942.075 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.080 kb on - strand, within B158DRAFT_0914at 942.082 kb on - strand, within B158DRAFT_0914at 942.259 kb on + strand, within B158DRAFT_0914at 942.289 kb on + strand, within B158DRAFT_0914at 942.343 kb on - strand, within B158DRAFT_0914at 942.348 kb on - strand, within B158DRAFT_0914at 942.355 kb on - strand, within B158DRAFT_0914at 942.377 kb on + strand, within B158DRAFT_0914at 942.377 kb on + strand, within B158DRAFT_0914at 942.377 kb on + strand, within B158DRAFT_0914at 942.377 kb on + strand, within B158DRAFT_0914at 942.377 kb on + strand, within B158DRAFT_0914at 942.377 kb on + strand, within B158DRAFT_0914at 942.377 kb on + strand, within B158DRAFT_0914at 942.385 kb on - strand, within B158DRAFT_0914at 942.385 kb on - strand, within B158DRAFT_0914at 942.385 kb on - strand, within B158DRAFT_0914at 942.385 kb on - strand, within B158DRAFT_0914at 942.385 kb on - strand, within B158DRAFT_0914at 942.421 kb on - strandat 942.441 kb on - strandat 942.507 kb on + strandat 942.599 kb on + strandat 942.649 kb on - strandat 942.759 kb on + strandat 942.767 kb on - strandat 942.767 kb on - strandat 942.767 kb on - strandat 942.767 kb on - strandat 942.769 kb on + strandat 942.784 kb on + strandat 942.794 kb on - strand, within B158DRAFT_0915at 942.799 kb on - strand, within B158DRAFT_0915at 942.852 kb on + strand, within B158DRAFT_0915at 942.902 kb on - strand, within B158DRAFT_0915at 942.961 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 943.021 kb on - strand, within B158DRAFT_0915at 943.093 kb on + strand, within B158DRAFT_0915at 943.197 kb on + strand, within B158DRAFT_0915at 943.270 kb on - strand, within B158DRAFT_0915at 943.398 kb on + strand, within B158DRAFT_0915at 943.418 kb on - strand, within B158DRAFT_0915at 943.418 kb on - strand, within B158DRAFT_0915at 943.425 kb on + strand, within B158DRAFT_0915at 943.443 kb on - strand, within B158DRAFT_0915at 943.482 kb on + strand, within B158DRAFT_0915at 943.489 kb on + strand, within B158DRAFT_0915at 943.508 kb on - strandat 943.510 kb on + strandat 943.510 kb on + strandat 943.510 kb on + strandat 943.518 kb on - strandat 943.532 kb on - strandat 944.252 kb on - strandat 944.279 kb on + strandat 944.286 kb on + strandat 944.287 kb on - strandat 944.294 kb on - strandat 944.307 kb on + strandat 944.307 kb on + strandat 944.370 kb on - strandat 944.372 kb on + strandat 944.396 kb on + strandat 944.396 kb on + strandat 944.419 kb on + strandat 944.427 kb on - strandat 944.427 kb on - strandat 944.429 kb on + strandat 944.497 kb on - strand, within B158DRAFT_0917at 944.497 kb on - strand, within B158DRAFT_0917at 944.570 kb on - strand, within B158DRAFT_0917at 944.588 kb on + strand, within B158DRAFT_0917

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
remove
941,728 + B158DRAFT_0914 0.62 +0.8
941,735 + B158DRAFT_0914 0.62 -2.7
941,742 + B158DRAFT_0914 0.63 -0.5
941,743 - B158DRAFT_0914 0.63 -0.8
941,747 + B158DRAFT_0914 0.63 +0.8
941,757 + B158DRAFT_0914 0.63 -2.4
941,765 - B158DRAFT_0914 0.64 -1.3
941,765 - B158DRAFT_0914 0.64 -3.9
941,765 - B158DRAFT_0914 0.64 -1.5
941,844 + B158DRAFT_0914 0.67 -1.8
941,844 + B158DRAFT_0914 0.67 -0.3
941,844 + B158DRAFT_0914 0.67 -0.4
941,844 + B158DRAFT_0914 0.67 -3.2
941,844 + B158DRAFT_0914 0.67 -0.5
941,844 + B158DRAFT_0914 0.67 -3.5
941,844 + B158DRAFT_0914 0.67 -0.3
941,844 + B158DRAFT_0914 0.67 -1.1
941,844 + B158DRAFT_0914 0.67 -0.3
941,844 + B158DRAFT_0914 0.67 -3.8
941,844 + B158DRAFT_0914 0.67 -0.6
941,844 + B158DRAFT_0914 0.67 -0.4
941,844 + B158DRAFT_0914 0.67 -0.1
941,852 - B158DRAFT_0914 0.67 -1.3
941,852 - B158DRAFT_0914 0.67 -1.5
941,852 - B158DRAFT_0914 0.67 -0.3
941,864 - B158DRAFT_0914 0.68 -1.6
941,874 - B158DRAFT_0914 0.68 -1.1
941,925 + B158DRAFT_0914 0.70 +0.7
941,933 - B158DRAFT_0914 0.70 -1.1
942,008 + B158DRAFT_0914 0.74 -1.8
942,013 + B158DRAFT_0914 0.74 -2.5
942,013 + B158DRAFT_0914 0.74 -2.3
942,013 + B158DRAFT_0914 0.74 -2.0
942,013 + B158DRAFT_0914 0.74 -0.9
942,013 + B158DRAFT_0914 0.74 -1.6
942,013 + B158DRAFT_0914 0.74 -2.9
942,016 - B158DRAFT_0914 0.74 -1.2
942,021 - B158DRAFT_0914 0.74 -2.2
942,021 - B158DRAFT_0914 0.74 -1.5
942,021 - B158DRAFT_0914 0.74 -0.3
942,021 - B158DRAFT_0914 0.74 -2.2
942,021 - B158DRAFT_0914 0.74 -1.6
942,021 - B158DRAFT_0914 0.74 -2.1
942,021 - B158DRAFT_0914 0.74 -0.5
942,021 - B158DRAFT_0914 0.74 -2.7
942,021 - B158DRAFT_0914 0.74 -0.7
942,021 - B158DRAFT_0914 0.74 +0.7
942,021 - B158DRAFT_0914 0.74 -2.4
942,021 - B158DRAFT_0914 0.74 -2.6
942,021 - B158DRAFT_0914 0.74 -0.8
942,036 - B158DRAFT_0914 0.75 -2.2
942,057 - B158DRAFT_0914 0.76 +0.3
942,067 + B158DRAFT_0914 0.76 +0.7
942,072 + B158DRAFT_0914 0.76 -2.4
942,072 + B158DRAFT_0914 0.76 +0.6
942,072 + B158DRAFT_0914 0.76 +0.9
942,072 + B158DRAFT_0914 0.76 -1.0
942,072 + B158DRAFT_0914 0.76 -2.9
942,072 + B158DRAFT_0914 0.76 -0.5
942,072 + B158DRAFT_0914 0.76 -1.4
942,072 + B158DRAFT_0914 0.76 +0.2
942,072 + B158DRAFT_0914 0.76 -0.9
942,072 + B158DRAFT_0914 0.76 -0.7
942,072 + B158DRAFT_0914 0.76 +0.5
942,072 + B158DRAFT_0914 0.76 -0.1
942,072 + B158DRAFT_0914 0.76 -1.3
942,072 + B158DRAFT_0914 0.76 -2.5
942,072 + B158DRAFT_0914 0.76 -0.9
942,075 - B158DRAFT_0914 0.76 -2.2
942,080 - B158DRAFT_0914 0.76 -0.6
942,080 - B158DRAFT_0914 0.76 -2.8
942,080 - B158DRAFT_0914 0.76 -1.7
942,080 - B158DRAFT_0914 0.76 -2.3
942,080 - B158DRAFT_0914 0.76 -1.0
942,080 - B158DRAFT_0914 0.76 -2.4
942,080 - B158DRAFT_0914 0.76 +1.0
942,080 - B158DRAFT_0914 0.76 -2.0
942,080 - B158DRAFT_0914 0.76 -0.8
942,080 - B158DRAFT_0914 0.76 -0.6
942,082 - B158DRAFT_0914 0.77 -0.6
942,259 + B158DRAFT_0914 0.84 -1.2
942,289 + B158DRAFT_0914 0.85 -1.3
942,343 - B158DRAFT_0914 0.87 -1.9
942,348 - B158DRAFT_0914 0.88 -1.8
942,355 - B158DRAFT_0914 0.88 -2.0
942,377 + B158DRAFT_0914 0.89 +0.1
942,377 + B158DRAFT_0914 0.89 -0.5
942,377 + B158DRAFT_0914 0.89 -2.2
942,377 + B158DRAFT_0914 0.89 -3.2
942,377 + B158DRAFT_0914 0.89 -1.7
942,377 + B158DRAFT_0914 0.89 -1.5
942,377 + B158DRAFT_0914 0.89 -1.9
942,385 - B158DRAFT_0914 0.89 -2.2
942,385 - B158DRAFT_0914 0.89 -1.9
942,385 - B158DRAFT_0914 0.89 -2.8
942,385 - B158DRAFT_0914 0.89 -3.6
942,385 - B158DRAFT_0914 0.89 -1.3
942,421 - -2.2
942,441 - +0.8
942,507 + -2.2
942,599 + +0.4
942,649 - -0.5
942,759 + +0.5
942,767 - +2.3
942,767 - +1.4
942,767 - -0.2
942,767 - +2.2
942,769 + +1.1
942,784 + +0.6
942,794 - B158DRAFT_0915 0.10 +1.1
942,799 - B158DRAFT_0915 0.11 +0.7
942,852 + B158DRAFT_0915 0.17 -2.4
942,902 - B158DRAFT_0915 0.22 -2.1
942,961 + B158DRAFT_0915 0.29 +0.9
942,963 + B158DRAFT_0915 0.29 +0.1
942,963 + B158DRAFT_0915 0.29 -0.5
942,963 + B158DRAFT_0915 0.29 +0.3
942,963 + B158DRAFT_0915 0.29 +0.0
942,963 + B158DRAFT_0915 0.29 +0.5
942,971 - B158DRAFT_0915 0.30 +0.6
942,971 - B158DRAFT_0915 0.30 -0.0
942,971 - B158DRAFT_0915 0.30 +0.8
942,971 - B158DRAFT_0915 0.30 -0.2
942,971 - B158DRAFT_0915 0.30 +0.7
942,971 - B158DRAFT_0915 0.30 +0.6
942,971 - B158DRAFT_0915 0.30 +0.2
943,021 - B158DRAFT_0915 0.36 +0.0
943,093 + B158DRAFT_0915 0.44 +1.6
943,197 + B158DRAFT_0915 0.55 +0.3
943,270 - B158DRAFT_0915 0.64 -0.1
943,398 + B158DRAFT_0915 0.78 -0.8
943,418 - B158DRAFT_0915 0.80 -0.1
943,418 - B158DRAFT_0915 0.80 +0.6
943,425 + B158DRAFT_0915 0.81 +0.7
943,443 - B158DRAFT_0915 0.83 +1.2
943,482 + B158DRAFT_0915 0.88 +1.6
943,489 + B158DRAFT_0915 0.88 -0.5
943,508 - +0.1
943,510 + -0.6
943,510 + -2.5
943,510 + +1.5
943,518 - +1.2
943,532 - +0.7
944,252 - -1.4
944,279 + -1.2
944,286 + +0.6
944,287 - -0.4
944,294 - -1.1
944,307 + +0.4
944,307 + +0.2
944,370 - -0.6
944,372 + -1.3
944,396 + -0.8
944,396 + -0.4
944,419 + -2.5
944,427 - -3.7
944,427 - -0.2
944,429 + -0.8
944,497 - B158DRAFT_0917 0.14 -2.2
944,497 - B158DRAFT_0917 0.14 -0.2
944,570 - B158DRAFT_0917 0.23 -3.9
944,588 + B158DRAFT_0917 0.25 -0.8

Or see this region's nucleotide sequence