Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0834

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0833 and B158DRAFT_0834 overlap by 27 nucleotidesB158DRAFT_0834 and B158DRAFT_0835 are separated by 15 nucleotidesB158DRAFT_0835 and B158DRAFT_0836 are separated by 108 nucleotides B158DRAFT_0833: B158DRAFT_0833 - undecaprenyl-diphosphatase UppP, at 843,418 to 844,242 _0833 B158DRAFT_0834: B158DRAFT_0834 - tRNA nucleotidyltransferase/poly(A) polymerase, at 844,216 to 845,451 _0834 B158DRAFT_0835: B158DRAFT_0835 - hypothetical protein, at 845,467 to 845,937 _0835 B158DRAFT_0836: B158DRAFT_0836 - Type II secretory pathway, component ExeA (predicted ATPase), at 846,046 to 847,779 _0836 Position (kb) 844 845 846Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 843.342 kb on + strandat 845.456 kb on + strandat 845.469 kb on + strandat 845.469 kb on + strandat 845.477 kb on - strandat 845.477 kb on - strandat 845.477 kb on - strandat 845.477 kb on - strandat 845.477 kb on - strandat 845.487 kb on - strandat 845.517 kb on - strand, within B158DRAFT_0835at 845.524 kb on + strand, within B158DRAFT_0835at 845.582 kb on + strand, within B158DRAFT_0835at 845.726 kb on - strand, within B158DRAFT_0835at 845.746 kb on + strand, within B158DRAFT_0835at 845.751 kb on + strand, within B158DRAFT_0835at 845.751 kb on + strand, within B158DRAFT_0835at 845.829 kb on - strand, within B158DRAFT_0835at 845.830 kb on - strand, within B158DRAFT_0835at 845.886 kb on - strand, within B158DRAFT_0835at 845.894 kb on - strandat 845.894 kb on - strandat 845.896 kb on - strandat 845.899 kb on - strandat 845.906 kb on - strandat 845.928 kb on - strandat 846.046 kb on - strandat 846.131 kb on + strandat 846.145 kb on + strandat 846.149 kb on - strandat 846.173 kb on - strandat 846.207 kb on + strandat 846.224 kb on + strand, within B158DRAFT_0836at 846.232 kb on - strand, within B158DRAFT_0836at 846.293 kb on + strand, within B158DRAFT_0836at 846.293 kb on + strand, within B158DRAFT_0836at 846.401 kb on + strand, within B158DRAFT_0836at 846.412 kb on + strand, within B158DRAFT_0836at 846.413 kb on + strand, within B158DRAFT_0836at 846.420 kb on - strand, within B158DRAFT_0836at 846.420 kb on - strand, within B158DRAFT_0836at 846.420 kb on - strand, within B158DRAFT_0836at 846.424 kb on + strand, within B158DRAFT_0836

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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843,342 + -0.3
845,456 + +1.4
845,469 + -1.5
845,469 + +2.3
845,477 - +0.3
845,477 - -0.6
845,477 - -1.4
845,477 - +0.2
845,477 - -2.3
845,487 - -1.3
845,517 - B158DRAFT_0835 0.11 -0.7
845,524 + B158DRAFT_0835 0.12 -1.0
845,582 + B158DRAFT_0835 0.24 +1.5
845,726 - B158DRAFT_0835 0.55 -0.3
845,746 + B158DRAFT_0835 0.59 +0.2
845,751 + B158DRAFT_0835 0.60 -2.1
845,751 + B158DRAFT_0835 0.60 +0.1
845,829 - B158DRAFT_0835 0.77 +2.0
845,830 - B158DRAFT_0835 0.77 -0.2
845,886 - B158DRAFT_0835 0.89 -3.1
845,894 - -2.0
845,894 - -0.9
845,896 - -0.4
845,899 - +0.1
845,906 - -0.7
845,928 - -0.4
846,046 - -0.0
846,131 + -0.0
846,145 + +1.0
846,149 - +0.4
846,173 - -0.3
846,207 + -1.6
846,224 + B158DRAFT_0836 0.10 +0.6
846,232 - B158DRAFT_0836 0.11 -2.2
846,293 + B158DRAFT_0836 0.14 -0.0
846,293 + B158DRAFT_0836 0.14 -1.4
846,401 + B158DRAFT_0836 0.20 +0.0
846,412 + B158DRAFT_0836 0.21 +0.4
846,413 + B158DRAFT_0836 0.21 -0.7
846,420 - B158DRAFT_0836 0.22 -0.1
846,420 - B158DRAFT_0836 0.22 +1.0
846,420 - B158DRAFT_0836 0.22 -1.1
846,424 + B158DRAFT_0836 0.22 -0.5

Or see this region's nucleotide sequence