Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0807

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0805 and B158DRAFT_0806 are separated by 260 nucleotidesB158DRAFT_0806 and B158DRAFT_0807 are separated by 1 nucleotidesB158DRAFT_0807 and B158DRAFT_0808 overlap by 4 nucleotidesB158DRAFT_0808 and B158DRAFT_0809 are separated by 56 nucleotidesB158DRAFT_0809 and B158DRAFT_0810 are separated by 136 nucleotides B158DRAFT_0805: B158DRAFT_0805 - Cation/multidrug efflux pump, at 813,554 to 816,658 _0805 B158DRAFT_0806: B158DRAFT_0806 - hypothetical protein, at 816,919 to 817,314 _0806 B158DRAFT_0807: B158DRAFT_0807 - Predicted GTPase, at 817,316 to 817,858 _0807 B158DRAFT_0808: B158DRAFT_0808 - Uncharacterized distant relative of homeotic protein bithoraxoid, at 817,855 to 818,229 _0808 B158DRAFT_0809: B158DRAFT_0809 - hypothetical protein, at 818,286 to 818,645 _0809 B158DRAFT_0810: B158DRAFT_0810 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 818,782 to 819,471 _0810 Position (kb) 817 818Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 816.339 kb on + strand, within B158DRAFT_0805at 816.356 kb on + strandat 816.357 kb on + strandat 816.357 kb on + strandat 816.365 kb on - strandat 816.365 kb on - strandat 816.417 kb on + strandat 816.417 kb on + strandat 816.422 kb on + strandat 816.425 kb on - strandat 816.432 kb on + strandat 816.458 kb on + strandat 816.493 kb on - strandat 816.587 kb on - strandat 816.618 kb on - strandat 816.618 kb on - strandat 816.625 kb on + strandat 816.668 kb on + strandat 816.676 kb on - strandat 816.679 kb on + strandat 816.679 kb on + strandat 816.679 kb on + strandat 816.687 kb on - strandat 816.687 kb on - strandat 816.687 kb on - strandat 816.687 kb on - strandat 816.707 kb on + strandat 816.847 kb on + strandat 816.871 kb on + strandat 816.879 kb on - strandat 816.972 kb on - strand, within B158DRAFT_0806at 816.972 kb on - strand, within B158DRAFT_0806at 816.984 kb on + strand, within B158DRAFT_0806at 816.986 kb on - strand, within B158DRAFT_0806at 816.992 kb on - strand, within B158DRAFT_0806at 816.992 kb on - strand, within B158DRAFT_0806at 816.992 kb on - strand, within B158DRAFT_0806at 817.046 kb on + strand, within B158DRAFT_0806at 817.054 kb on - strand, within B158DRAFT_0806at 817.088 kb on - strand, within B158DRAFT_0806at 817.120 kb on + strand, within B158DRAFT_0806at 817.137 kb on + strand, within B158DRAFT_0806at 817.157 kb on + strand, within B158DRAFT_0806at 817.180 kb on - strand, within B158DRAFT_0806at 817.272 kb on - strand, within B158DRAFT_0806at 817.299 kb on + strandat 817.299 kb on + strandat 817.307 kb on - strandat 817.308 kb on + strandat 817.308 kb on + strandat 817.316 kb on - strandat 817.490 kb on + strand, within B158DRAFT_0807at 817.496 kb on + strand, within B158DRAFT_0807at 817.496 kb on + strand, within B158DRAFT_0807at 817.496 kb on + strand, within B158DRAFT_0807at 817.504 kb on - strand, within B158DRAFT_0807at 817.504 kb on - strand, within B158DRAFT_0807at 817.729 kb on + strand, within B158DRAFT_0807at 817.745 kb on + strand, within B158DRAFT_0807at 817.761 kb on - strand, within B158DRAFT_0807at 818.149 kb on + strand, within B158DRAFT_0808at 818.334 kb on + strand, within B158DRAFT_0809at 818.341 kb on + strand, within B158DRAFT_0809at 818.342 kb on - strand, within B158DRAFT_0809at 818.409 kb on - strand, within B158DRAFT_0809at 818.525 kb on + strand, within B158DRAFT_0809at 818.536 kb on + strand, within B158DRAFT_0809at 818.544 kb on - strand, within B158DRAFT_0809at 818.613 kb on + strandat 818.621 kb on - strandat 818.621 kb on - strandat 818.626 kb on - strandat 818.748 kb on - strandat 818.757 kb on - strandat 818.779 kb on + strandat 818.789 kb on + strandat 818.789 kb on + strandat 818.839 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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816,339 + B158DRAFT_0805 0.90 -2.4
816,356 + -2.5
816,357 + -1.8
816,357 + -1.0
816,365 - -1.5
816,365 - -0.6
816,417 + -2.9
816,417 + -3.5
816,422 + +1.1
816,425 - -0.5
816,432 + +0.2
816,458 + -1.1
816,493 - -0.4
816,587 - -1.7
816,618 - +1.0
816,618 - -0.2
816,625 + -0.4
816,668 + -0.8
816,676 - -0.6
816,679 + -1.1
816,679 + -0.5
816,679 + -0.6
816,687 - +0.3
816,687 - -0.7
816,687 - -1.1
816,687 - -0.6
816,707 + +0.4
816,847 + +0.1
816,871 + -0.3
816,879 - -1.5
816,972 - B158DRAFT_0806 0.13 -0.4
816,972 - B158DRAFT_0806 0.13 -0.8
816,984 + B158DRAFT_0806 0.16 -2.2
816,986 - B158DRAFT_0806 0.17 -1.2
816,992 - B158DRAFT_0806 0.18 +0.4
816,992 - B158DRAFT_0806 0.18 +1.0
816,992 - B158DRAFT_0806 0.18 -0.1
817,046 + B158DRAFT_0806 0.32 -0.9
817,054 - B158DRAFT_0806 0.34 -0.3
817,088 - B158DRAFT_0806 0.43 -1.5
817,120 + B158DRAFT_0806 0.51 -0.6
817,137 + B158DRAFT_0806 0.55 +0.3
817,157 + B158DRAFT_0806 0.60 -2.1
817,180 - B158DRAFT_0806 0.66 +0.9
817,272 - B158DRAFT_0806 0.89 -0.9
817,299 + +0.7
817,299 + -0.3
817,307 - -1.1
817,308 + +0.1
817,308 + -2.6
817,316 - +0.3
817,490 + B158DRAFT_0807 0.32 +0.9
817,496 + B158DRAFT_0807 0.33 +0.6
817,496 + B158DRAFT_0807 0.33 +0.3
817,496 + B158DRAFT_0807 0.33 -0.5
817,504 - B158DRAFT_0807 0.35 +3.4
817,504 - B158DRAFT_0807 0.35 -2.4
817,729 + B158DRAFT_0807 0.76 -1.0
817,745 + B158DRAFT_0807 0.79 -0.1
817,761 - B158DRAFT_0807 0.82 -0.6
818,149 + B158DRAFT_0808 0.78 -2.2
818,334 + B158DRAFT_0809 0.13 +0.0
818,341 + B158DRAFT_0809 0.15 -1.4
818,342 - B158DRAFT_0809 0.16 -0.1
818,409 - B158DRAFT_0809 0.34 +0.6
818,525 + B158DRAFT_0809 0.66 -0.4
818,536 + B158DRAFT_0809 0.69 -0.9
818,544 - B158DRAFT_0809 0.72 -1.4
818,613 + -0.2
818,621 - -0.4
818,621 - +1.1
818,626 - -0.6
818,748 - +1.1
818,757 - +0.8
818,779 + -2.1
818,789 + -1.4
818,789 + +1.1
818,839 + -0.6

Or see this region's nucleotide sequence