Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0712

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0709 and B158DRAFT_0710 are separated by 32 nucleotidesB158DRAFT_0710 and B158DRAFT_0711 are separated by 27 nucleotidesB158DRAFT_0711 and B158DRAFT_0712 overlap by 1 nucleotidesB158DRAFT_0712 and B158DRAFT_0713 are separated by 17 nucleotidesB158DRAFT_0713 and B158DRAFT_0714 are separated by 0 nucleotides B158DRAFT_0709: B158DRAFT_0709 - Rhodanese-related sulfurtransferase, at 710,187 to 710,612 _0709 B158DRAFT_0710: B158DRAFT_0710 - Glutaredoxin, GrxC family, at 710,645 to 710,905 _0710 B158DRAFT_0711: B158DRAFT_0711 - protein translocase subunit secB, at 710,933 to 711,439 _0711 B158DRAFT_0712: B158DRAFT_0712 - Glycerol-3-phosphate dehydrogenase, at 711,439 to 712,449 _0712 B158DRAFT_0713: B158DRAFT_0713 - rRNA methylase, putative, group 2, at 712,467 to 712,928 _0713 B158DRAFT_0714: B158DRAFT_0714 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 712,929 to 713,537 _0714 Position (kb) 711 712 713Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 710.470 kb on + strand, within B158DRAFT_0709at 710.493 kb on + strand, within B158DRAFT_0709at 710.501 kb on - strand, within B158DRAFT_0709at 710.562 kb on + strand, within B158DRAFT_0709at 710.573 kb on + strandat 710.753 kb on + strand, within B158DRAFT_0710at 710.916 kb on + strandat 710.929 kb on + strandat 710.929 kb on + strandat 712.446 kb on - strandat 712.446 kb on - strandat 712.447 kb on - strandat 712.477 kb on + strandat 712.536 kb on + strand, within B158DRAFT_0713at 712.543 kb on - strand, within B158DRAFT_0713at 712.543 kb on - strand, within B158DRAFT_0713at 712.585 kb on + strand, within B158DRAFT_0713at 712.616 kb on - strand, within B158DRAFT_0713at 712.725 kb on + strand, within B158DRAFT_0713at 712.753 kb on + strand, within B158DRAFT_0713at 712.778 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.787 kb on - strand, within B158DRAFT_0713at 712.938 kb on + strandat 712.961 kb on - strandat 712.961 kb on - strandat 712.969 kb on - strandat 713.090 kb on - strand, within B158DRAFT_0714at 713.104 kb on + strand, within B158DRAFT_0714at 713.109 kb on + strand, within B158DRAFT_0714at 713.158 kb on + strand, within B158DRAFT_0714at 713.175 kb on + strand, within B158DRAFT_0714at 713.175 kb on + strand, within B158DRAFT_0714at 713.183 kb on - strand, within B158DRAFT_0714at 713.207 kb on + strand, within B158DRAFT_0714at 713.214 kb on + strand, within B158DRAFT_0714at 713.215 kb on - strand, within B158DRAFT_0714at 713.249 kb on + strand, within B158DRAFT_0714at 713.249 kb on + strand, within B158DRAFT_0714at 713.342 kb on + strand, within B158DRAFT_0714at 713.342 kb on + strand, within B158DRAFT_0714at 713.342 kb on + strand, within B158DRAFT_0714at 713.365 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.412 kb on + strand, within B158DRAFT_0714at 713.439 kb on + strand, within B158DRAFT_0714at 713.446 kb on + strand, within B158DRAFT_0714at 713.446 kb on + strand, within B158DRAFT_0714

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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710,470 + B158DRAFT_0709 0.66 -2.0
710,493 + B158DRAFT_0709 0.72 -1.2
710,501 - B158DRAFT_0709 0.74 +0.0
710,562 + B158DRAFT_0709 0.88 -1.3
710,573 + +0.3
710,753 + B158DRAFT_0710 0.41 -2.1
710,916 + -0.3
710,929 + +0.2
710,929 + +0.8
712,446 - -1.9
712,446 - +1.2
712,447 - +1.1
712,477 + -0.8
712,536 + B158DRAFT_0713 0.15 +1.4
712,543 - B158DRAFT_0713 0.16 +0.4
712,543 - B158DRAFT_0713 0.16 +0.7
712,585 + B158DRAFT_0713 0.26 -0.1
712,616 - B158DRAFT_0713 0.32 -0.7
712,725 + B158DRAFT_0713 0.56 +0.0
712,753 + B158DRAFT_0713 0.62 -1.6
712,778 + B158DRAFT_0713 0.67 +0.7
712,779 + B158DRAFT_0713 0.68 +0.0
712,779 + B158DRAFT_0713 0.68 -0.3
712,779 + B158DRAFT_0713 0.68 +0.6
712,779 + B158DRAFT_0713 0.68 -0.5
712,779 + B158DRAFT_0713 0.68 -0.9
712,787 - B158DRAFT_0713 0.69 -0.5
712,938 + -0.5
712,961 - +1.2
712,961 - +0.9
712,969 - +0.9
713,090 - B158DRAFT_0714 0.26 +4.0
713,104 + B158DRAFT_0714 0.29 +2.9
713,109 + B158DRAFT_0714 0.30 +2.5
713,158 + B158DRAFT_0714 0.38 +2.7
713,175 + B158DRAFT_0714 0.40 +3.1
713,175 + B158DRAFT_0714 0.40 +0.0
713,183 - B158DRAFT_0714 0.42 +2.8
713,207 + B158DRAFT_0714 0.46 -0.2
713,214 + B158DRAFT_0714 0.47 +3.3
713,215 - B158DRAFT_0714 0.47 +1.5
713,249 + B158DRAFT_0714 0.53 +2.5
713,249 + B158DRAFT_0714 0.53 -1.0
713,342 + B158DRAFT_0714 0.68 +2.5
713,342 + B158DRAFT_0714 0.68 +3.5
713,342 + B158DRAFT_0714 0.68 +3.7
713,365 + B158DRAFT_0714 0.72 -1.9
713,401 + B158DRAFT_0714 0.78 +2.6
713,401 + B158DRAFT_0714 0.78 +3.1
713,401 + B158DRAFT_0714 0.78 +2.7
713,401 + B158DRAFT_0714 0.78 +3.1
713,401 + B158DRAFT_0714 0.78 +3.3
713,409 - B158DRAFT_0714 0.79 +4.9
713,409 - B158DRAFT_0714 0.79 +2.7
713,409 - B158DRAFT_0714 0.79 +3.4
713,409 - B158DRAFT_0714 0.79 +2.1
713,409 - B158DRAFT_0714 0.79 +4.2
713,409 - B158DRAFT_0714 0.79 -1.2
713,412 + B158DRAFT_0714 0.79 +4.5
713,439 + B158DRAFT_0714 0.84 +4.3
713,446 + B158DRAFT_0714 0.85 +3.4
713,446 + B158DRAFT_0714 0.85 +0.9

Or see this region's nucleotide sequence