Experiment: m.b. Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0243 and B158DRAFT_0244 are separated by 3 nucleotides B158DRAFT_0244 and B158DRAFT_0245 are separated by 14 nucleotides B158DRAFT_0245 and B158DRAFT_0246 are separated by 98 nucleotides B158DRAFT_0246 and B158DRAFT_0247 overlap by 4 nucleotides
B158DRAFT_0243: B158DRAFT_0243 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 251,542 to 252,207
_0243
B158DRAFT_0244: B158DRAFT_0244 - tyrosine recombinase XerC subunit, at 252,211 to 253,110
_0244
B158DRAFT_0245: B158DRAFT_0245 - Uncharacterized protein conserved in bacteria, at 253,125 to 253,802
_0245
B158DRAFT_0246: B158DRAFT_0246 - diaminopimelate epimerase (EC 5.1.1.7), at 253,901 to 254,731
_0246
B158DRAFT_0247: B158DRAFT_0247 - hypothetical protein, at 254,728 to 254,955
_0247
Position (kb) 253
254 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 252.325 kb on + strand, within B158DRAFT_0244 at 252.335 kb on + strand, within B158DRAFT_0244 at 252.379 kb on - strand, within B158DRAFT_0244 at 252.379 kb on - strand, within B158DRAFT_0244 at 252.648 kb on + strand, within B158DRAFT_0244 at 252.827 kb on - strand, within B158DRAFT_0244 at 252.885 kb on - strand, within B158DRAFT_0244 at 252.887 kb on + strand, within B158DRAFT_0244 at 252.887 kb on + strand, within B158DRAFT_0244 at 252.897 kb on + strand, within B158DRAFT_0244 at 252.963 kb on - strand, within B158DRAFT_0244 at 253.188 kb on + strand at 253.224 kb on + strand, within B158DRAFT_0245 at 253.224 kb on + strand, within B158DRAFT_0245 at 253.418 kb on - strand, within B158DRAFT_0245 at 253.418 kb on - strand, within B158DRAFT_0245 at 253.495 kb on + strand, within B158DRAFT_0245 at 253.538 kb on + strand, within B158DRAFT_0245 at 253.538 kb on + strand, within B158DRAFT_0245 at 253.572 kb on - strand, within B158DRAFT_0245 at 253.673 kb on - strand, within B158DRAFT_0245 at 253.692 kb on - strand, within B158DRAFT_0245 at 253.692 kb on - strand, within B158DRAFT_0245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM remove 252,325 + B158DRAFT_0244 0.13 -0.7 252,335 + B158DRAFT_0244 0.14 -0.7 252,379 - B158DRAFT_0244 0.19 +0.8 252,379 - B158DRAFT_0244 0.19 -2.7 252,648 + B158DRAFT_0244 0.49 -0.0 252,827 - B158DRAFT_0244 0.68 -1.9 252,885 - B158DRAFT_0244 0.75 -1.9 252,887 + B158DRAFT_0244 0.75 -0.2 252,887 + B158DRAFT_0244 0.75 -0.0 252,897 + B158DRAFT_0244 0.76 -1.5 252,963 - B158DRAFT_0244 0.84 -1.1 253,188 + +0.8 253,224 + B158DRAFT_0245 0.15 -1.3 253,224 + B158DRAFT_0245 0.15 +1.2 253,418 - B158DRAFT_0245 0.43 -2.3 253,418 - B158DRAFT_0245 0.43 -0.7 253,495 + B158DRAFT_0245 0.55 -2.6 253,538 + B158DRAFT_0245 0.61 +1.2 253,538 + B158DRAFT_0245 0.61 +1.8 253,572 - B158DRAFT_0245 0.66 -3.6 253,673 - B158DRAFT_0245 0.81 +0.2 253,692 - B158DRAFT_0245 0.84 -0.5 253,692 - B158DRAFT_0245 0.84 -1.6
Or see this region's nucleotide sequence