Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0140

Experiment: m.b. Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0138 and B158DRAFT_0139 overlap by 4 nucleotidesB158DRAFT_0139 and B158DRAFT_0140 are separated by 26 nucleotidesB158DRAFT_0140 and B158DRAFT_0141 are separated by 108 nucleotidesB158DRAFT_0141 and B158DRAFT_0142 are separated by 126 nucleotides B158DRAFT_0138: B158DRAFT_0138 - hypothetical protein, at 136,441 to 137,190 _0138 B158DRAFT_0139: B158DRAFT_0139 - RNA polymerase sigma factor, sigma-70 family, at 137,187 to 137,876 _0139 B158DRAFT_0140: B158DRAFT_0140 - Uncharacterized protein containing a von Willebrand factor type A (vWA) domain, at 137,903 to 139,648 _0140 B158DRAFT_0141: B158DRAFT_0141 - thioesterase domain, putative, at 139,757 to 140,230 _0141 B158DRAFT_0142: B158DRAFT_0142 - ABC-type phosphate transport system, periplasmic component, at 140,357 to 141,736 _0142 Position (kb) 137 138 139 140Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 136.909 kb on + strand, within B158DRAFT_0138at 137.008 kb on - strand, within B158DRAFT_0138at 137.010 kb on + strand, within B158DRAFT_0138at 137.028 kb on + strand, within B158DRAFT_0138at 137.042 kb on - strand, within B158DRAFT_0138at 137.109 kb on + strand, within B158DRAFT_0138at 137.240 kb on + strandat 137.245 kb on - strandat 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.279 kb on + strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.298 kb on + strand, within B158DRAFT_0139at 137.351 kb on - strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.550 kb on - strand, within B158DRAFT_0139at 137.567 kb on - strand, within B158DRAFT_0139at 137.567 kb on - strand, within B158DRAFT_0139at 137.578 kb on + strand, within B158DRAFT_0139at 137.596 kb on - strand, within B158DRAFT_0139at 137.690 kb on + strand, within B158DRAFT_0139at 137.711 kb on - strand, within B158DRAFT_0139at 137.726 kb on + strand, within B158DRAFT_0139at 137.743 kb on - strand, within B158DRAFT_0139at 137.772 kb on - strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.808 kb on - strandat 137.808 kb on - strandat 137.808 kb on - strandat 137.810 kb on + strandat 137.905 kb on + strandat 137.910 kb on + strandat 137.910 kb on + strandat 137.910 kb on + strandat 137.918 kb on - strandat 137.923 kb on - strandat 137.923 kb on - strandat 137.931 kb on + strandat 137.939 kb on - strandat 137.942 kb on - strandat 137.942 kb on - strandat 138.009 kb on + strandat 138.009 kb on + strandat 138.017 kb on + strandat 138.017 kb on - strandat 138.025 kb on - strandat 138.035 kb on + strandat 138.069 kb on - strandat 138.069 kb on - strandat 138.094 kb on + strand, within B158DRAFT_0140at 138.102 kb on - strand, within B158DRAFT_0140at 138.102 kb on - strand, within B158DRAFT_0140at 138.123 kb on - strand, within B158DRAFT_0140at 138.141 kb on + strand, within B158DRAFT_0140at 138.168 kb on - strand, within B158DRAFT_0140at 138.262 kb on + strand, within B158DRAFT_0140at 138.270 kb on + strand, within B158DRAFT_0140at 138.295 kb on + strand, within B158DRAFT_0140at 138.313 kb on - strand, within B158DRAFT_0140at 138.323 kb on - strand, within B158DRAFT_0140at 138.323 kb on - strand, within B158DRAFT_0140at 138.333 kb on - strand, within B158DRAFT_0140at 138.368 kb on - strand, within B158DRAFT_0140at 138.566 kb on - strand, within B158DRAFT_0140at 138.571 kb on - strand, within B158DRAFT_0140at 138.602 kb on - strand, within B158DRAFT_0140at 138.633 kb on - strand, within B158DRAFT_0140at 138.741 kb on + strand, within B158DRAFT_0140at 138.747 kb on + strand, within B158DRAFT_0140at 138.747 kb on + strand, within B158DRAFT_0140at 138.749 kb on - strand, within B158DRAFT_0140at 138.835 kb on + strand, within B158DRAFT_0140at 138.835 kb on + strand, within B158DRAFT_0140at 138.843 kb on - strand, within B158DRAFT_0140at 138.843 kb on - strand, within B158DRAFT_0140at 138.866 kb on - strand, within B158DRAFT_0140at 138.912 kb on + strand, within B158DRAFT_0140at 138.912 kb on + strand, within B158DRAFT_0140at 138.917 kb on + strand, within B158DRAFT_0140at 138.917 kb on + strand, within B158DRAFT_0140at 138.922 kb on + strand, within B158DRAFT_0140at 138.925 kb on - strand, within B158DRAFT_0140at 138.927 kb on + strand, within B158DRAFT_0140at 138.935 kb on - strand, within B158DRAFT_0140at 138.967 kb on + strand, within B158DRAFT_0140at 139.021 kb on + strand, within B158DRAFT_0140at 139.021 kb on + strand, within B158DRAFT_0140at 139.048 kb on - strand, within B158DRAFT_0140at 139.110 kb on - strand, within B158DRAFT_0140at 139.115 kb on - strand, within B158DRAFT_0140at 139.155 kb on - strand, within B158DRAFT_0140at 139.155 kb on - strand, within B158DRAFT_0140at 139.211 kb on - strand, within B158DRAFT_0140at 139.270 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.493 kb on - strandat 139.495 kb on + strandat 139.517 kb on - strandat 139.538 kb on + strandat 139.548 kb on - strandat 139.616 kb on + strandat 139.680 kb on + strandat 139.698 kb on + strandat 139.699 kb on - strandat 139.706 kb on - strandat 139.725 kb on - strandat 139.725 kb on - strandat 139.778 kb on + strandat 139.786 kb on - strandat 139.796 kb on - strandat 139.807 kb on + strand, within B158DRAFT_0141at 139.828 kb on + strand, within B158DRAFT_0141at 139.834 kb on + strand, within B158DRAFT_0141at 139.836 kb on - strand, within B158DRAFT_0141at 139.843 kb on + strand, within B158DRAFT_0141at 139.864 kb on - strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.925 kb on - strand, within B158DRAFT_0141at 139.937 kb on + strand, within B158DRAFT_0141at 139.981 kb on - strand, within B158DRAFT_0141at 140.013 kb on - strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.025 kb on + strand, within B158DRAFT_0141at 140.033 kb on - strand, within B158DRAFT_0141at 140.080 kb on + strand, within B158DRAFT_0141at 140.081 kb on - strand, within B158DRAFT_0141at 140.088 kb on - strand, within B158DRAFT_0141at 140.351 kb on - strandat 140.504 kb on + strand, within B158DRAFT_0142at 140.505 kb on + strand, within B158DRAFT_0142at 140.514 kb on + strand, within B158DRAFT_0142at 140.540 kb on - strand, within B158DRAFT_0142at 140.540 kb on - strand, within B158DRAFT_0142at 140.572 kb on + strand, within B158DRAFT_0142

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
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136,909 + B158DRAFT_0138 0.62 +3.9
137,008 - B158DRAFT_0138 0.76 -1.7
137,010 + B158DRAFT_0138 0.76 +2.6
137,028 + B158DRAFT_0138 0.78 -0.1
137,042 - B158DRAFT_0138 0.80 +2.8
137,109 + B158DRAFT_0138 0.89 -2.7
137,240 + -0.7
137,245 - -1.3
137,272 + B158DRAFT_0139 0.12 -1.1
137,272 + B158DRAFT_0139 0.12 +0.8
137,272 + B158DRAFT_0139 0.12 -1.6
137,272 + B158DRAFT_0139 0.12 -1.0
137,272 + B158DRAFT_0139 0.12 -1.2
137,272 + B158DRAFT_0139 0.12 +0.5
137,272 + B158DRAFT_0139 0.12 +0.3
137,279 + B158DRAFT_0139 0.13 +0.0
137,280 - B158DRAFT_0139 0.13 -0.9
137,280 - B158DRAFT_0139 0.13 -0.1
137,280 - B158DRAFT_0139 0.13 -0.2
137,280 - B158DRAFT_0139 0.13 +0.4
137,280 - B158DRAFT_0139 0.13 -1.9
137,280 - B158DRAFT_0139 0.13 -1.2
137,280 - B158DRAFT_0139 0.13 -2.6
137,280 - B158DRAFT_0139 0.13 -0.9
137,280 - B158DRAFT_0139 0.13 -0.8
137,280 - B158DRAFT_0139 0.13 -0.3
137,280 - B158DRAFT_0139 0.13 -2.2
137,280 - B158DRAFT_0139 0.13 +0.7
137,280 - B158DRAFT_0139 0.13 -0.5
137,280 - B158DRAFT_0139 0.13 +0.1
137,280 - B158DRAFT_0139 0.13 -0.4
137,280 - B158DRAFT_0139 0.13 -0.3
137,298 + B158DRAFT_0139 0.16 -0.3
137,351 - B158DRAFT_0139 0.24 +2.1
137,482 + B158DRAFT_0139 0.43 +0.1
137,482 + B158DRAFT_0139 0.43 -1.1
137,482 + B158DRAFT_0139 0.43 +0.2
137,490 - B158DRAFT_0139 0.44 +0.5
137,490 - B158DRAFT_0139 0.44 +1.1
137,490 - B158DRAFT_0139 0.44 +0.9
137,490 - B158DRAFT_0139 0.44 +0.8
137,490 - B158DRAFT_0139 0.44 +1.1
137,490 - B158DRAFT_0139 0.44 -0.9
137,490 - B158DRAFT_0139 0.44 -0.3
137,490 - B158DRAFT_0139 0.44 +0.2
137,490 - B158DRAFT_0139 0.44 +1.2
137,550 - B158DRAFT_0139 0.53 +0.6
137,567 - B158DRAFT_0139 0.55 -0.2
137,567 - B158DRAFT_0139 0.55 +0.1
137,578 + B158DRAFT_0139 0.57 -0.5
137,596 - B158DRAFT_0139 0.59 -0.2
137,690 + B158DRAFT_0139 0.73 +0.2
137,711 - B158DRAFT_0139 0.76 -0.1
137,726 + B158DRAFT_0139 0.78 +0.1
137,743 - B158DRAFT_0139 0.81 +0.6
137,772 - B158DRAFT_0139 0.85 +0.5
137,800 + B158DRAFT_0139 0.89 -1.8
137,800 + B158DRAFT_0139 0.89 +1.5
137,800 + B158DRAFT_0139 0.89 -0.4
137,808 - +0.8
137,808 - -1.5
137,808 - -1.3
137,810 + -0.9
137,905 + -0.0
137,910 + -0.8
137,910 + -1.4
137,910 + +1.0
137,918 - -0.9
137,923 - -3.5
137,923 - -1.1
137,931 + +0.1
137,939 - -0.7
137,942 - +0.0
137,942 - -3.2
138,009 + -0.8
138,009 + -1.9
138,017 + -0.0
138,017 - -1.5
138,025 - +0.5
138,035 + -1.7
138,069 - +0.3
138,069 - +0.3
138,094 + B158DRAFT_0140 0.11 -1.9
138,102 - B158DRAFT_0140 0.11 +0.4
138,102 - B158DRAFT_0140 0.11 -1.6
138,123 - B158DRAFT_0140 0.13 -0.9
138,141 + B158DRAFT_0140 0.14 -3.3
138,168 - B158DRAFT_0140 0.15 +1.2
138,262 + B158DRAFT_0140 0.21 +1.6
138,270 + B158DRAFT_0140 0.21 -0.5
138,295 + B158DRAFT_0140 0.22 +0.5
138,313 - B158DRAFT_0140 0.23 -0.9
138,323 - B158DRAFT_0140 0.24 -0.5
138,323 - B158DRAFT_0140 0.24 -0.3
138,333 - B158DRAFT_0140 0.25 -0.5
138,368 - B158DRAFT_0140 0.27 +2.3
138,566 - B158DRAFT_0140 0.38 +0.5
138,571 - B158DRAFT_0140 0.38 +0.2
138,602 - B158DRAFT_0140 0.40 -1.2
138,633 - B158DRAFT_0140 0.42 -1.3
138,741 + B158DRAFT_0140 0.48 +1.2
138,747 + B158DRAFT_0140 0.48 -1.2
138,747 + B158DRAFT_0140 0.48 +1.0
138,749 - B158DRAFT_0140 0.48 -0.2
138,835 + B158DRAFT_0140 0.53 +1.0
138,835 + B158DRAFT_0140 0.53 -2.8
138,843 - B158DRAFT_0140 0.54 -0.1
138,843 - B158DRAFT_0140 0.54 -0.7
138,866 - B158DRAFT_0140 0.55 +0.2
138,912 + B158DRAFT_0140 0.58 -2.3
138,912 + B158DRAFT_0140 0.58 -0.0
138,917 + B158DRAFT_0140 0.58 -1.2
138,917 + B158DRAFT_0140 0.58 -1.0
138,922 + B158DRAFT_0140 0.58 +0.2
138,925 - B158DRAFT_0140 0.59 -0.8
138,927 + B158DRAFT_0140 0.59 -1.2
138,935 - B158DRAFT_0140 0.59 -1.1
138,967 + B158DRAFT_0140 0.61 +0.5
139,021 + B158DRAFT_0140 0.64 +0.9
139,021 + B158DRAFT_0140 0.64 -1.2
139,048 - B158DRAFT_0140 0.66 -0.2
139,110 - B158DRAFT_0140 0.69 +0.4
139,115 - B158DRAFT_0140 0.69 -0.8
139,155 - B158DRAFT_0140 0.72 -0.8
139,155 - B158DRAFT_0140 0.72 -0.4
139,211 - B158DRAFT_0140 0.75 +1.3
139,270 + B158DRAFT_0140 0.78 -0.6
139,411 + B158DRAFT_0140 0.86 -0.3
139,411 + B158DRAFT_0140 0.86 +1.0
139,411 + B158DRAFT_0140 0.86 -1.7
139,411 + B158DRAFT_0140 0.86 -0.9
139,411 + B158DRAFT_0140 0.86 -0.5
139,411 + B158DRAFT_0140 0.86 +2.1
139,411 + B158DRAFT_0140 0.86 -0.3
139,411 + B158DRAFT_0140 0.86 +0.6
139,411 + B158DRAFT_0140 0.86 -0.4
139,411 + B158DRAFT_0140 0.86 +0.2
139,411 + B158DRAFT_0140 0.86 +0.3
139,411 + B158DRAFT_0140 0.86 +0.1
139,411 + B158DRAFT_0140 0.86 -0.5
139,411 - B158DRAFT_0140 0.86 -1.1
139,419 - B158DRAFT_0140 0.87 -0.7
139,419 - B158DRAFT_0140 0.87 +0.5
139,419 - B158DRAFT_0140 0.87 +0.2
139,419 - B158DRAFT_0140 0.87 +0.2
139,419 - B158DRAFT_0140 0.87 -0.7
139,419 - B158DRAFT_0140 0.87 -0.3
139,493 - -1.5
139,495 + -0.6
139,517 - -0.7
139,538 + -0.5
139,548 - +0.3
139,616 + -0.8
139,680 + +0.8
139,698 + -0.8
139,699 - -0.6
139,706 - -1.5
139,725 - -0.6
139,725 - -0.7
139,778 + -0.3
139,786 - +0.2
139,796 - -0.5
139,807 + B158DRAFT_0141 0.11 -0.5
139,828 + B158DRAFT_0141 0.15 -0.1
139,834 + B158DRAFT_0141 0.16 -0.0
139,836 - B158DRAFT_0141 0.17 +0.7
139,843 + B158DRAFT_0141 0.18 -1.2
139,864 - B158DRAFT_0141 0.23 -0.9
139,872 + B158DRAFT_0141 0.24 +0.3
139,872 + B158DRAFT_0141 0.24 -1.9
139,872 + B158DRAFT_0141 0.24 -0.6
139,872 + B158DRAFT_0141 0.24 -1.1
139,872 + B158DRAFT_0141 0.24 -1.4
139,880 - B158DRAFT_0141 0.26 -0.7
139,880 - B158DRAFT_0141 0.26 -1.3
139,880 - B158DRAFT_0141 0.26 -0.2
139,880 - B158DRAFT_0141 0.26 -1.5
139,925 - B158DRAFT_0141 0.35 +0.7
139,937 + B158DRAFT_0141 0.38 +0.6
139,981 - B158DRAFT_0141 0.47 -1.6
140,013 - B158DRAFT_0141 0.54 +1.3
140,015 + B158DRAFT_0141 0.54 -0.5
140,015 + B158DRAFT_0141 0.54 +0.5
140,015 + B158DRAFT_0141 0.54 -3.2
140,015 + B158DRAFT_0141 0.54 +0.6
140,015 + B158DRAFT_0141 0.54 -0.2
140,023 - B158DRAFT_0141 0.56 -0.2
140,023 - B158DRAFT_0141 0.56 +0.1
140,023 - B158DRAFT_0141 0.56 -0.3
140,023 - B158DRAFT_0141 0.56 -2.7
140,023 - B158DRAFT_0141 0.56 -0.6
140,023 - B158DRAFT_0141 0.56 +0.2
140,025 + B158DRAFT_0141 0.57 -1.6
140,033 - B158DRAFT_0141 0.58 -0.1
140,080 + B158DRAFT_0141 0.68 +1.9
140,081 - B158DRAFT_0141 0.68 +0.1
140,088 - B158DRAFT_0141 0.70 +0.9
140,351 - -0.3
140,504 + B158DRAFT_0142 0.11 -0.7
140,505 + B158DRAFT_0142 0.11 +0.2
140,514 + B158DRAFT_0142 0.11 -1.3
140,540 - B158DRAFT_0142 0.13 -0.8
140,540 - B158DRAFT_0142 0.13 -0.1
140,572 + B158DRAFT_0142 0.16 -0.0

Or see this region's nucleotide sequence