Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0117

Experiment: m.b. Chlorite 2.5 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0116 and B158DRAFT_0117 overlap by 1 nucleotidesB158DRAFT_0117 and B158DRAFT_0118 overlap by 4 nucleotidesB158DRAFT_0118 and B158DRAFT_0119 are separated by 42 nucleotides B158DRAFT_0116: B158DRAFT_0116 - NADH dehydrogenase subunit L (EC 1.6.5.3), at 113,163 to 115,181 _0116 B158DRAFT_0117: B158DRAFT_0117 - NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K), at 115,181 to 115,483 _0117 B158DRAFT_0118: B158DRAFT_0118 - NADH dehydrogenase subunit J (EC 1.6.5.3), at 115,480 to 116,160 _0118 B158DRAFT_0119: B158DRAFT_0119 - NADH dehydrogenase subunit I (EC 1.6.5.3), at 116,203 to 116,694 _0119 Position (kb) 115 116Strain fitness (log2 ratio) -1 0 1 2 3 4 5at 114.186 kb on + strand, within B158DRAFT_0116at 114.249 kb on + strand, within B158DRAFT_0116at 114.280 kb on + strand, within B158DRAFT_0116at 114.333 kb on + strand, within B158DRAFT_0116at 114.336 kb on - strand, within B158DRAFT_0116at 114.403 kb on + strand, within B158DRAFT_0116at 114.411 kb on - strand, within B158DRAFT_0116at 114.452 kb on - strand, within B158DRAFT_0116at 114.467 kb on - strand, within B158DRAFT_0116at 114.476 kb on - strand, within B158DRAFT_0116at 114.496 kb on - strand, within B158DRAFT_0116at 114.498 kb on + strand, within B158DRAFT_0116at 114.501 kb on - strand, within B158DRAFT_0116at 114.525 kb on + strand, within B158DRAFT_0116at 114.557 kb on + strand, within B158DRAFT_0116at 114.726 kb on + strand, within B158DRAFT_0116at 114.726 kb on + strand, within B158DRAFT_0116at 114.734 kb on - strand, within B158DRAFT_0116at 114.759 kb on - strand, within B158DRAFT_0116at 114.786 kb on + strand, within B158DRAFT_0116at 114.813 kb on + strand, within B158DRAFT_0116at 114.859 kb on - strand, within B158DRAFT_0116at 114.870 kb on + strand, within B158DRAFT_0116at 114.878 kb on + strand, within B158DRAFT_0116at 114.878 kb on + strand, within B158DRAFT_0116at 114.886 kb on - strand, within B158DRAFT_0116at 114.886 kb on - strand, within B158DRAFT_0116at 114.910 kb on - strand, within B158DRAFT_0116at 115.021 kb on + strandat 115.021 kb on + strandat 115.021 kb on + strandat 115.021 kb on + strandat 115.029 kb on - strandat 115.031 kb on + strandat 115.043 kb on + strandat 115.063 kb on - strandat 115.069 kb on + strandat 115.109 kb on - strandat 115.187 kb on - strandat 115.202 kb on - strandat 115.212 kb on - strand, within B158DRAFT_0117at 115.212 kb on - strand, within B158DRAFT_0117at 115.212 kb on - strand, within B158DRAFT_0117at 115.232 kb on + strand, within B158DRAFT_0117at 115.258 kb on - strand, within B158DRAFT_0117at 115.258 kb on - strand, within B158DRAFT_0117at 115.270 kb on + strand, within B158DRAFT_0117at 115.375 kb on + strand, within B158DRAFT_0117at 115.383 kb on - strand, within B158DRAFT_0117at 115.386 kb on - strand, within B158DRAFT_0117at 115.432 kb on + strand, within B158DRAFT_0117at 115.489 kb on - strandat 115.501 kb on - strandat 115.541 kb on + strandat 115.560 kb on + strand, within B158DRAFT_0118at 115.610 kb on + strand, within B158DRAFT_0118at 115.615 kb on + strand, within B158DRAFT_0118at 115.615 kb on + strand, within B158DRAFT_0118at 115.623 kb on - strand, within B158DRAFT_0118at 115.630 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.749 kb on + strand, within B158DRAFT_0118at 115.757 kb on + strand, within B158DRAFT_0118at 115.758 kb on - strand, within B158DRAFT_0118at 115.768 kb on + strand, within B158DRAFT_0118at 115.824 kb on - strand, within B158DRAFT_0118at 115.889 kb on - strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.915 kb on + strand, within B158DRAFT_0118at 115.954 kb on - strand, within B158DRAFT_0118at 115.973 kb on + strand, within B158DRAFT_0118at 115.978 kb on + strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 116.031 kb on - strand, within B158DRAFT_0118at 116.059 kb on + strand, within B158DRAFT_0118at 116.067 kb on - strand, within B158DRAFT_0118at 116.090 kb on + strand, within B158DRAFT_0118at 116.098 kb on + strandat 116.119 kb on - strandat 116.155 kb on + strandat 116.199 kb on - strandat 116.201 kb on + strandat 116.387 kb on + strand, within B158DRAFT_0119at 116.434 kb on - strand, within B158DRAFT_0119at 116.482 kb on - strand, within B158DRAFT_0119

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
remove
114,186 + B158DRAFT_0116 0.51 +4.4
114,249 + B158DRAFT_0116 0.54 +4.8
114,280 + B158DRAFT_0116 0.55 +3.2
114,333 + B158DRAFT_0116 0.58 +4.6
114,336 - B158DRAFT_0116 0.58 +3.4
114,403 + B158DRAFT_0116 0.61 +4.4
114,411 - B158DRAFT_0116 0.62 +3.8
114,452 - B158DRAFT_0116 0.64 +3.9
114,467 - B158DRAFT_0116 0.65 +3.5
114,476 - B158DRAFT_0116 0.65 +4.4
114,496 - B158DRAFT_0116 0.66 +4.0
114,498 + B158DRAFT_0116 0.66 +4.7
114,501 - B158DRAFT_0116 0.66 +3.7
114,525 + B158DRAFT_0116 0.67 +4.9
114,557 + B158DRAFT_0116 0.69 +4.5
114,726 + B158DRAFT_0116 0.77 +3.9
114,726 + B158DRAFT_0116 0.77 +4.4
114,734 - B158DRAFT_0116 0.78 +4.1
114,759 - B158DRAFT_0116 0.79 +3.9
114,786 + B158DRAFT_0116 0.80 +4.7
114,813 + B158DRAFT_0116 0.82 +4.0
114,859 - B158DRAFT_0116 0.84 +3.8
114,870 + B158DRAFT_0116 0.85 +4.1
114,878 + B158DRAFT_0116 0.85 +4.8
114,878 + B158DRAFT_0116 0.85 +4.1
114,886 - B158DRAFT_0116 0.85 +4.4
114,886 - B158DRAFT_0116 0.85 +3.8
114,910 - B158DRAFT_0116 0.87 +3.6
115,021 + +5.0
115,021 + +4.5
115,021 + +3.8
115,021 + +4.0
115,029 - +3.9
115,031 + +4.5
115,043 + +4.6
115,063 - +4.3
115,069 + +5.7
115,109 - +4.3
115,187 - +1.7
115,202 - +2.3
115,212 - B158DRAFT_0117 0.10 +0.3
115,212 - B158DRAFT_0117 0.10 -0.8
115,212 - B158DRAFT_0117 0.10 +0.0
115,232 + B158DRAFT_0117 0.17 +4.7
115,258 - B158DRAFT_0117 0.25 +4.3
115,258 - B158DRAFT_0117 0.25 +4.0
115,270 + B158DRAFT_0117 0.29 +4.3
115,375 + B158DRAFT_0117 0.64 +4.6
115,383 - B158DRAFT_0117 0.67 +4.7
115,386 - B158DRAFT_0117 0.68 +4.7
115,432 + B158DRAFT_0117 0.83 +4.5
115,489 - +1.0
115,501 - -1.2
115,541 + +4.3
115,560 + B158DRAFT_0118 0.12 +4.7
115,610 + B158DRAFT_0118 0.19 +4.7
115,615 + B158DRAFT_0118 0.20 +4.6
115,615 + B158DRAFT_0118 0.20 +4.9
115,623 - B158DRAFT_0118 0.21 +3.6
115,630 + B158DRAFT_0118 0.22 +4.6
115,736 + B158DRAFT_0118 0.38 +4.2
115,736 + B158DRAFT_0118 0.38 +4.4
115,736 + B158DRAFT_0118 0.38 +4.7
115,749 + B158DRAFT_0118 0.40 +4.8
115,757 + B158DRAFT_0118 0.41 +4.6
115,758 - B158DRAFT_0118 0.41 +4.9
115,768 + B158DRAFT_0118 0.42 +4.5
115,824 - B158DRAFT_0118 0.51 +4.5
115,889 - B158DRAFT_0118 0.60 +4.8
115,905 + B158DRAFT_0118 0.62 +4.3
115,905 + B158DRAFT_0118 0.62 +4.6
115,905 + B158DRAFT_0118 0.62 +4.8
115,913 - B158DRAFT_0118 0.64 +4.6
115,913 - B158DRAFT_0118 0.64 +4.8
115,913 - B158DRAFT_0118 0.64 +4.6
115,913 - B158DRAFT_0118 0.64 +4.6
115,915 + B158DRAFT_0118 0.64 +4.9
115,954 - B158DRAFT_0118 0.70 +2.7
115,973 + B158DRAFT_0118 0.72 +4.9
115,978 + B158DRAFT_0118 0.73 +5.0
115,981 - B158DRAFT_0118 0.74 +4.7
115,981 - B158DRAFT_0118 0.74 +4.3
115,981 - B158DRAFT_0118 0.74 +4.7
116,031 - B158DRAFT_0118 0.81 +5.6
116,059 + B158DRAFT_0118 0.85 +4.5
116,067 - B158DRAFT_0118 0.86 +4.8
116,090 + B158DRAFT_0118 0.90 +4.6
116,098 + +4.8
116,119 - +5.1
116,155 + +4.3
116,199 - -0.0
116,201 + +4.5
116,387 + B158DRAFT_0119 0.37 +4.2
116,434 - B158DRAFT_0119 0.47 +4.2
116,482 - B158DRAFT_0119 0.57 +4.3

Or see this region's nucleotide sequence