Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0094

Experiment: m.b. Chlorite 2.5 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0091 and B158DRAFT_0092 are separated by 24 nucleotidesB158DRAFT_0092 and B158DRAFT_0093 are separated by 49 nucleotidesB158DRAFT_0093 and B158DRAFT_0094 are separated by 105 nucleotidesB158DRAFT_0094 and B158DRAFT_0095 are separated by 12 nucleotides B158DRAFT_0091: B158DRAFT_0091 - hypothetical protein, at 86,701 to 87,213 _0091 B158DRAFT_0092: B158DRAFT_0092 - hypothetical protein, at 87,238 to 87,447 _0092 B158DRAFT_0093: B158DRAFT_0093 - hypothetical protein, at 87,497 to 87,961 _0093 B158DRAFT_0094: B158DRAFT_0094 - hypothetical protein, at 88,067 to 88,285 _0094 B158DRAFT_0095: B158DRAFT_0095 - apolipoprotein N-acyltransferase, at 88,298 to 89,815 _0095 Position (kb) 88 89Strain fitness (log2 ratio) -1 0 1 2 3at 87.114 kb on + strand, within B158DRAFT_0091at 87.122 kb on - strand, within B158DRAFT_0091at 87.383 kb on - strand, within B158DRAFT_0092at 87.395 kb on - strand, within B158DRAFT_0092at 87.397 kb on - strand, within B158DRAFT_0092at 87.527 kb on + strandat 87.527 kb on + strandat 87.535 kb on - strandat 87.535 kb on - strandat 87.535 kb on - strandat 87.544 kb on - strand, within B158DRAFT_0093at 87.650 kb on - strand, within B158DRAFT_0093at 87.657 kb on - strand, within B158DRAFT_0093at 87.741 kb on - strand, within B158DRAFT_0093at 87.798 kb on + strand, within B158DRAFT_0093at 87.939 kb on + strandat 87.953 kb on - strandat 87.959 kb on - strandat 88.101 kb on - strand, within B158DRAFT_0094at 88.141 kb on + strand, within B158DRAFT_0094at 88.172 kb on - strand, within B158DRAFT_0094at 88.227 kb on - strand, within B158DRAFT_0094at 88.391 kb on - strandat 88.506 kb on + strand, within B158DRAFT_0095at 88.552 kb on + strand, within B158DRAFT_0095at 89.036 kb on - strand, within B158DRAFT_0095at 89.036 kb on - strand, within B158DRAFT_0095at 89.036 kb on - strand, within B158DRAFT_0095at 89.176 kb on + strand, within B158DRAFT_0095at 89.186 kb on + strand, within B158DRAFT_0095at 89.186 kb on + strand, within B158DRAFT_0095at 89.194 kb on - strand, within B158DRAFT_0095

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 2.5 mM
remove
87,114 + B158DRAFT_0091 0.81 +1.2
87,122 - B158DRAFT_0091 0.82 +1.3
87,383 - B158DRAFT_0092 0.69 -0.2
87,395 - B158DRAFT_0092 0.75 -0.0
87,397 - B158DRAFT_0092 0.76 -1.3
87,527 + +0.0
87,527 + +1.1
87,535 - +1.2
87,535 - -0.9
87,535 - +0.4
87,544 - B158DRAFT_0093 0.10 +0.6
87,650 - B158DRAFT_0093 0.33 -1.0
87,657 - B158DRAFT_0093 0.34 +0.4
87,741 - B158DRAFT_0093 0.52 -0.2
87,798 + B158DRAFT_0093 0.65 -0.4
87,939 + -0.9
87,953 - -0.4
87,959 - +0.2
88,101 - B158DRAFT_0094 0.16 +0.9
88,141 + B158DRAFT_0094 0.34 +0.3
88,172 - B158DRAFT_0094 0.48 -0.8
88,227 - B158DRAFT_0094 0.73 -0.5
88,391 - +2.3
88,506 + B158DRAFT_0095 0.14 +3.2
88,552 + B158DRAFT_0095 0.17 +2.8
89,036 - B158DRAFT_0095 0.49 +2.0
89,036 - B158DRAFT_0095 0.49 +1.9
89,036 - B158DRAFT_0095 0.49 +2.2
89,176 + B158DRAFT_0095 0.58 +1.5
89,186 + B158DRAFT_0095 0.58 +1.8
89,186 + B158DRAFT_0095 0.58 +2.1
89,194 - B158DRAFT_0095 0.59 +1.5

Or see this region's nucleotide sequence