Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2513

Experiment: m.b. Sisomicin 0.025 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2512 and B158DRAFT_2513 are separated by 44 nucleotidesB158DRAFT_2513 and B158DRAFT_2514 are separated by 422 nucleotidesB158DRAFT_2514 and B158DRAFT_2515 are separated by 196 nucleotides B158DRAFT_2512: B158DRAFT_2512 - Acyl-CoA dehydrogenases, at 700,644 to 701,804 _2512 B158DRAFT_2513: B158DRAFT_2513 - Predicted transcriptional regulators, at 701,849 to 702,232 _2513 B158DRAFT_2514: B158DRAFT_2514 - Ribosome modulation factor, at 702,655 to 702,837 _2514 B158DRAFT_2515: B158DRAFT_2515 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 703,034 to 704,146 _2515 Position (kb) 701 702 703Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 700.880 kb on - strand, within B158DRAFT_2512at 700.924 kb on + strand, within B158DRAFT_2512at 700.924 kb on + strand, within B158DRAFT_2512at 700.926 kb on + strand, within B158DRAFT_2512at 700.926 kb on + strand, within B158DRAFT_2512at 700.932 kb on - strand, within B158DRAFT_2512at 700.932 kb on - strand, within B158DRAFT_2512at 700.934 kb on - strand, within B158DRAFT_2512at 700.934 kb on - strand, within B158DRAFT_2512at 700.934 kb on - strand, within B158DRAFT_2512at 700.939 kb on + strand, within B158DRAFT_2512at 700.939 kb on + strand, within B158DRAFT_2512at 700.947 kb on - strand, within B158DRAFT_2512at 700.947 kb on - strand, within B158DRAFT_2512at 700.947 kb on - strand, within B158DRAFT_2512at 700.952 kb on - strand, within B158DRAFT_2512at 700.966 kb on - strand, within B158DRAFT_2512at 700.983 kb on - strand, within B158DRAFT_2512at 700.993 kb on - strand, within B158DRAFT_2512at 701.015 kb on + strand, within B158DRAFT_2512at 701.052 kb on + strand, within B158DRAFT_2512at 701.053 kb on + strand, within B158DRAFT_2512at 701.060 kb on - strand, within B158DRAFT_2512at 701.178 kb on + strand, within B158DRAFT_2512at 701.183 kb on + strand, within B158DRAFT_2512at 701.218 kb on - strand, within B158DRAFT_2512at 701.219 kb on - strand, within B158DRAFT_2512at 701.359 kb on + strand, within B158DRAFT_2512at 701.359 kb on + strand, within B158DRAFT_2512at 701.378 kb on + strand, within B158DRAFT_2512at 701.393 kb on + strand, within B158DRAFT_2512at 701.416 kb on + strand, within B158DRAFT_2512at 701.418 kb on - strand, within B158DRAFT_2512at 701.428 kb on + strand, within B158DRAFT_2512at 701.436 kb on + strand, within B158DRAFT_2512at 701.454 kb on - strand, within B158DRAFT_2512at 701.480 kb on + strand, within B158DRAFT_2512at 701.480 kb on + strand, within B158DRAFT_2512at 701.512 kb on - strand, within B158DRAFT_2512at 701.524 kb on - strand, within B158DRAFT_2512at 701.525 kb on - strand, within B158DRAFT_2512at 701.543 kb on - strand, within B158DRAFT_2512at 701.588 kb on + strand, within B158DRAFT_2512at 701.588 kb on + strand, within B158DRAFT_2512at 701.588 kb on + strand, within B158DRAFT_2512at 701.588 kb on + strand, within B158DRAFT_2512at 701.588 kb on + strand, within B158DRAFT_2512at 701.593 kb on + strand, within B158DRAFT_2512at 701.593 kb on + strand, within B158DRAFT_2512at 701.596 kb on - strand, within B158DRAFT_2512at 701.596 kb on - strand, within B158DRAFT_2512at 701.596 kb on - strand, within B158DRAFT_2512at 701.596 kb on - strand, within B158DRAFT_2512at 701.596 kb on - strand, within B158DRAFT_2512at 701.596 kb on - strand, within B158DRAFT_2512at 701.598 kb on + strand, within B158DRAFT_2512at 701.598 kb on + strand, within B158DRAFT_2512at 701.598 kb on + strand, within B158DRAFT_2512at 701.598 kb on + strand, within B158DRAFT_2512at 701.598 kb on + strand, within B158DRAFT_2512at 701.601 kb on - strand, within B158DRAFT_2512at 701.606 kb on - strand, within B158DRAFT_2512at 701.606 kb on - strand, within B158DRAFT_2512at 701.606 kb on - strand, within B158DRAFT_2512at 701.621 kb on - strand, within B158DRAFT_2512at 701.739 kb on + strandat 701.768 kb on - strandat 701.788 kb on - strandat 701.795 kb on - strandat 701.825 kb on - strandat 701.847 kb on + strandat 701.847 kb on + strandat 701.879 kb on - strandat 701.881 kb on + strandat 701.918 kb on - strand, within B158DRAFT_2513at 701.933 kb on + strand, within B158DRAFT_2513at 701.984 kb on - strand, within B158DRAFT_2513at 701.984 kb on - strand, within B158DRAFT_2513at 701.984 kb on - strand, within B158DRAFT_2513at 702.063 kb on - strand, within B158DRAFT_2513at 702.111 kb on + strand, within B158DRAFT_2513at 702.158 kb on - strand, within B158DRAFT_2513at 702.188 kb on + strand, within B158DRAFT_2513at 702.188 kb on + strand, within B158DRAFT_2513at 702.209 kb on + strandat 702.209 kb on + strandat 702.209 kb on + strandat 702.217 kb on - strandat 702.217 kb on - strandat 702.217 kb on - strandat 702.294 kb on - strandat 702.324 kb on - strandat 702.324 kb on - strandat 702.395 kb on - strandat 702.397 kb on - strandat 702.504 kb on - strandat 702.571 kb on + strandat 702.579 kb on - strandat 702.579 kb on - strandat 702.579 kb on - strandat 702.615 kb on + strandat 702.642 kb on - strandat 702.696 kb on - strand, within B158DRAFT_2514at 702.715 kb on + strand, within B158DRAFT_2514at 702.715 kb on + strand, within B158DRAFT_2514at 702.715 kb on + strand, within B158DRAFT_2514at 702.715 kb on + strand, within B158DRAFT_2514at 702.715 kb on + strand, within B158DRAFT_2514at 702.715 kb on + strand, within B158DRAFT_2514at 702.723 kb on - strand, within B158DRAFT_2514at 702.723 kb on - strand, within B158DRAFT_2514at 702.723 kb on - strand, within B158DRAFT_2514at 702.723 kb on - strand, within B158DRAFT_2514at 702.723 kb on - strand, within B158DRAFT_2514at 702.723 kb on - strand, within B158DRAFT_2514at 702.723 kb on - strand, within B158DRAFT_2514at 702.735 kb on + strand, within B158DRAFT_2514at 702.735 kb on + strand, within B158DRAFT_2514at 702.738 kb on - strand, within B158DRAFT_2514at 702.761 kb on + strand, within B158DRAFT_2514at 702.774 kb on + strand, within B158DRAFT_2514at 702.794 kb on + strand, within B158DRAFT_2514at 702.794 kb on + strand, within B158DRAFT_2514at 702.802 kb on - strand, within B158DRAFT_2514at 702.802 kb on - strand, within B158DRAFT_2514at 703.029 kb on - strandat 703.130 kb on - strandat 703.142 kb on + strandat 703.231 kb on - strand, within B158DRAFT_2515

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
remove
700,880 - B158DRAFT_2512 0.20 +1.2
700,924 + B158DRAFT_2512 0.24 +0.4
700,924 + B158DRAFT_2512 0.24 +1.0
700,926 + B158DRAFT_2512 0.24 +0.8
700,926 + B158DRAFT_2512 0.24 -0.4
700,932 - B158DRAFT_2512 0.25 +0.0
700,932 - B158DRAFT_2512 0.25 -1.3
700,934 - B158DRAFT_2512 0.25 +0.3
700,934 - B158DRAFT_2512 0.25 +0.1
700,934 - B158DRAFT_2512 0.25 -2.2
700,939 + B158DRAFT_2512 0.25 +0.6
700,939 + B158DRAFT_2512 0.25 +0.2
700,947 - B158DRAFT_2512 0.26 -0.9
700,947 - B158DRAFT_2512 0.26 -0.4
700,947 - B158DRAFT_2512 0.26 +5.7
700,952 - B158DRAFT_2512 0.27 -1.2
700,966 - B158DRAFT_2512 0.28 +0.1
700,983 - B158DRAFT_2512 0.29 +0.8
700,993 - B158DRAFT_2512 0.30 +1.3
701,015 + B158DRAFT_2512 0.32 -1.0
701,052 + B158DRAFT_2512 0.35 -0.1
701,053 + B158DRAFT_2512 0.35 -1.3
701,060 - B158DRAFT_2512 0.36 +4.0
701,178 + B158DRAFT_2512 0.46 +1.4
701,183 + B158DRAFT_2512 0.46 -0.6
701,218 - B158DRAFT_2512 0.49 -0.9
701,219 - B158DRAFT_2512 0.50 +0.8
701,359 + B158DRAFT_2512 0.62 +0.2
701,359 + B158DRAFT_2512 0.62 +0.8
701,378 + B158DRAFT_2512 0.63 +0.7
701,393 + B158DRAFT_2512 0.65 +0.7
701,416 + B158DRAFT_2512 0.66 +0.4
701,418 - B158DRAFT_2512 0.67 -0.6
701,428 + B158DRAFT_2512 0.68 -0.1
701,436 + B158DRAFT_2512 0.68 -0.6
701,454 - B158DRAFT_2512 0.70 -0.2
701,480 + B158DRAFT_2512 0.72 +0.9
701,480 + B158DRAFT_2512 0.72 -2.0
701,512 - B158DRAFT_2512 0.75 +2.3
701,524 - B158DRAFT_2512 0.76 -0.7
701,525 - B158DRAFT_2512 0.76 -0.1
701,543 - B158DRAFT_2512 0.77 +0.1
701,588 + B158DRAFT_2512 0.81 -0.9
701,588 + B158DRAFT_2512 0.81 -1.3
701,588 + B158DRAFT_2512 0.81 +0.9
701,588 + B158DRAFT_2512 0.81 +1.1
701,588 + B158DRAFT_2512 0.81 +0.2
701,593 + B158DRAFT_2512 0.82 +0.4
701,593 + B158DRAFT_2512 0.82 -1.0
701,596 - B158DRAFT_2512 0.82 -0.7
701,596 - B158DRAFT_2512 0.82 -1.7
701,596 - B158DRAFT_2512 0.82 -1.6
701,596 - B158DRAFT_2512 0.82 -2.5
701,596 - B158DRAFT_2512 0.82 -1.7
701,596 - B158DRAFT_2512 0.82 -0.8
701,598 + B158DRAFT_2512 0.82 +0.5
701,598 + B158DRAFT_2512 0.82 +1.4
701,598 + B158DRAFT_2512 0.82 -0.7
701,598 + B158DRAFT_2512 0.82 -0.5
701,598 + B158DRAFT_2512 0.82 +1.1
701,601 - B158DRAFT_2512 0.82 -0.2
701,606 - B158DRAFT_2512 0.83 -0.7
701,606 - B158DRAFT_2512 0.83 +1.8
701,606 - B158DRAFT_2512 0.83 -1.1
701,621 - B158DRAFT_2512 0.84 +0.0
701,739 + -0.7
701,768 - +0.9
701,788 - -0.1
701,795 - +2.8
701,825 - +0.1
701,847 + +0.1
701,847 + +1.2
701,879 - +0.3
701,881 + +1.9
701,918 - B158DRAFT_2513 0.18 -0.8
701,933 + B158DRAFT_2513 0.22 +1.0
701,984 - B158DRAFT_2513 0.35 +1.2
701,984 - B158DRAFT_2513 0.35 -0.4
701,984 - B158DRAFT_2513 0.35 -0.7
702,063 - B158DRAFT_2513 0.56 -0.4
702,111 + B158DRAFT_2513 0.68 +2.4
702,158 - B158DRAFT_2513 0.80 +0.1
702,188 + B158DRAFT_2513 0.88 +2.1
702,188 + B158DRAFT_2513 0.88 +1.0
702,209 + -1.2
702,209 + -0.4
702,209 + +1.3
702,217 - +0.7
702,217 - -0.9
702,217 - +1.3
702,294 - -0.2
702,324 - -0.9
702,324 - -0.9
702,395 - +0.2
702,397 - +0.1
702,504 - -2.3
702,571 + -1.8
702,579 - -2.3
702,579 - -0.1
702,579 - -1.0
702,615 + +2.5
702,642 - -1.9
702,696 - B158DRAFT_2514 0.22 -2.0
702,715 + B158DRAFT_2514 0.33 -1.8
702,715 + B158DRAFT_2514 0.33 -1.6
702,715 + B158DRAFT_2514 0.33 +0.3
702,715 + B158DRAFT_2514 0.33 -0.4
702,715 + B158DRAFT_2514 0.33 -0.8
702,715 + B158DRAFT_2514 0.33 -0.6
702,723 - B158DRAFT_2514 0.37 -0.9
702,723 - B158DRAFT_2514 0.37 +0.3
702,723 - B158DRAFT_2514 0.37 +0.5
702,723 - B158DRAFT_2514 0.37 -0.7
702,723 - B158DRAFT_2514 0.37 +0.7
702,723 - B158DRAFT_2514 0.37 -0.2
702,723 - B158DRAFT_2514 0.37 -0.7
702,735 + B158DRAFT_2514 0.44 -0.2
702,735 + B158DRAFT_2514 0.44 -1.4
702,738 - B158DRAFT_2514 0.45 +0.7
702,761 + B158DRAFT_2514 0.58 +1.3
702,774 + B158DRAFT_2514 0.65 -0.5
702,794 + B158DRAFT_2514 0.76 +0.4
702,794 + B158DRAFT_2514 0.76 -1.4
702,802 - B158DRAFT_2514 0.80 +1.6
702,802 - B158DRAFT_2514 0.80 -0.5
703,029 - -2.3
703,130 - -2.0
703,142 + -1.5
703,231 - B158DRAFT_2515 0.18 -1.6

Or see this region's nucleotide sequence