Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2492 and B158DRAFT_2493 are separated by 9 nucleotides B158DRAFT_2493 and B158DRAFT_2494 are separated by 119 nucleotides B158DRAFT_2494 and B158DRAFT_2495 are separated by 91 nucleotides
B158DRAFT_2492: B158DRAFT_2492 - Rad3-related DNA helicases, at 673,627 to 675,588
_2492
B158DRAFT_2493: B158DRAFT_2493 - universal bacterial protein YeaZ, at 675,598 to 676,305
_2493
B158DRAFT_2494: B158DRAFT_2494 - outer membrane lipoprotein, Slp family, at 676,425 to 677,153
_2494
B158DRAFT_2495: B158DRAFT_2495 - putative efflux protein, MATE family, at 677,245 to 678,648
_2495
Position (kb) 676
677
678 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 675.489 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.290 kb on + strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.298 kb on - strand at 676.491 kb on - strand at 676.578 kb on - strand, within B158DRAFT_2494 at 676.601 kb on - strand, within B158DRAFT_2494 at 676.650 kb on + strand, within B158DRAFT_2494 at 676.658 kb on - strand, within B158DRAFT_2494 at 676.659 kb on + strand, within B158DRAFT_2494 at 676.674 kb on + strand, within B158DRAFT_2494 at 676.851 kb on - strand, within B158DRAFT_2494 at 676.863 kb on + strand, within B158DRAFT_2494 at 676.871 kb on - strand, within B158DRAFT_2494 at 676.894 kb on - strand, within B158DRAFT_2494 at 676.919 kb on + strand, within B158DRAFT_2494 at 676.987 kb on + strand, within B158DRAFT_2494 at 677.014 kb on - strand, within B158DRAFT_2494 at 677.035 kb on + strand, within B158DRAFT_2494 at 677.043 kb on - strand, within B158DRAFT_2494 at 677.043 kb on - strand, within B158DRAFT_2494 at 677.043 kb on - strand, within B158DRAFT_2494 at 677.043 kb on - strand, within B158DRAFT_2494 at 677.043 kb on - strand, within B158DRAFT_2494 at 677.043 kb on - strand, within B158DRAFT_2494 at 677.048 kb on - strand, within B158DRAFT_2494 at 677.050 kb on + strand, within B158DRAFT_2494 at 677.050 kb on + strand, within B158DRAFT_2494 at 677.050 kb on + strand, within B158DRAFT_2494 at 677.050 kb on + strand, within B158DRAFT_2494 at 677.050 kb on + strand, within B158DRAFT_2494 at 677.058 kb on - strand, within B158DRAFT_2494 at 677.058 kb on - strand, within B158DRAFT_2494 at 677.058 kb on - strand, within B158DRAFT_2494 at 677.063 kb on + strand, within B158DRAFT_2494 at 677.068 kb on + strand, within B158DRAFT_2494 at 677.071 kb on - strand, within B158DRAFT_2494 at 677.071 kb on - strand, within B158DRAFT_2494 at 677.071 kb on - strand, within B158DRAFT_2494 at 677.071 kb on - strand, within B158DRAFT_2494 at 677.080 kb on + strand, within B158DRAFT_2494 at 677.086 kb on + strand at 677.086 kb on + strand at 677.086 kb on + strand at 677.086 kb on + strand at 677.094 kb on - strand at 677.094 kb on - strand at 677.094 kb on - strand at 677.094 kb on - strand at 677.094 kb on - strand at 677.114 kb on - strand at 677.160 kb on + strand at 677.173 kb on + strand at 677.231 kb on - strand at 677.275 kb on + strand at 677.278 kb on - strand at 677.356 kb on + strand at 677.356 kb on + strand at 677.356 kb on + strand at 677.363 kb on + strand at 677.363 kb on + strand at 677.364 kb on - strand at 677.364 kb on - strand at 677.467 kb on + strand, within B158DRAFT_2495 at 677.490 kb on + strand, within B158DRAFT_2495 at 677.498 kb on - strand, within B158DRAFT_2495 at 677.576 kb on + strand, within B158DRAFT_2495 at 677.578 kb on - strand, within B158DRAFT_2495 at 677.589 kb on - strand, within B158DRAFT_2495 at 677.594 kb on - strand, within B158DRAFT_2495 at 677.596 kb on + strand, within B158DRAFT_2495 at 677.604 kb on + strand, within B158DRAFT_2495 at 677.604 kb on + strand, within B158DRAFT_2495 at 677.612 kb on - strand, within B158DRAFT_2495 at 677.612 kb on - strand, within B158DRAFT_2495 at 677.626 kb on - strand, within B158DRAFT_2495 at 677.678 kb on + strand, within B158DRAFT_2495 at 677.735 kb on + strand, within B158DRAFT_2495 at 677.743 kb on - strand, within B158DRAFT_2495 at 677.743 kb on - strand, within B158DRAFT_2495 at 677.767 kb on + strand, within B158DRAFT_2495 at 677.767 kb on + strand, within B158DRAFT_2495 at 677.767 kb on + strand, within B158DRAFT_2495 at 677.767 kb on + strand, within B158DRAFT_2495 at 677.775 kb on - strand, within B158DRAFT_2495 at 677.775 kb on - strand, within B158DRAFT_2495 at 677.775 kb on - strand, within B158DRAFT_2495 at 677.775 kb on - strand, within B158DRAFT_2495 at 677.786 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.796 kb on + strand, within B158DRAFT_2495 at 677.804 kb on - strand, within B158DRAFT_2495 at 677.804 kb on - strand, within B158DRAFT_2495 at 677.804 kb on - strand, within B158DRAFT_2495 at 677.817 kb on + strand, within B158DRAFT_2495 at 677.825 kb on - strand, within B158DRAFT_2495 at 677.912 kb on - strand, within B158DRAFT_2495 at 677.912 kb on - strand, within B158DRAFT_2495 at 677.937 kb on + strand, within B158DRAFT_2495 at 677.957 kb on + strand, within B158DRAFT_2495 at 677.997 kb on - strand, within B158DRAFT_2495 at 677.999 kb on + strand, within B158DRAFT_2495 at 678.000 kb on - strand, within B158DRAFT_2495 at 678.037 kb on + strand, within B158DRAFT_2495 at 678.077 kb on + strand, within B158DRAFT_2495 at 678.077 kb on + strand, within B158DRAFT_2495 at 678.085 kb on - strand, within B158DRAFT_2495 at 678.090 kb on + strand, within B158DRAFT_2495 at 678.090 kb on + strand, within B158DRAFT_2495 at 678.098 kb on - strand, within B158DRAFT_2495 at 678.098 kb on - strand, within B158DRAFT_2495 at 678.099 kb on + strand, within B158DRAFT_2495 at 678.107 kb on - strand, within B158DRAFT_2495 at 678.147 kb on - strand, within B158DRAFT_2495 at 678.147 kb on - strand, within B158DRAFT_2495 at 678.147 kb on - strand, within B158DRAFT_2495
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 675,489 + -0.9 676,290 + -0.5 676,290 + -0.3 676,290 + -0.1 676,290 + +0.4 676,290 + -1.3 676,290 + -1.2 676,290 + +0.2 676,290 + -0.3 676,290 + -0.5 676,290 + -2.6 676,290 + +0.5 676,290 + -0.7 676,290 + +0.1 676,290 + -1.3 676,290 + -1.7 676,290 + -0.6 676,290 + +2.0 676,290 + -0.4 676,290 + -0.6 676,290 + -1.2 676,290 + -1.6 676,298 - -0.7 676,298 - -0.1 676,298 - -0.2 676,298 - -1.0 676,298 - +0.5 676,298 - -2.1 676,298 - -0.2 676,298 - -0.6 676,298 - +0.5 676,298 - +1.9 676,298 - -0.5 676,298 - -0.3 676,298 - -0.6 676,298 - -1.7 676,298 - -0.0 676,298 - -0.4 676,298 - +0.2 676,298 - -1.8 676,298 - -0.7 676,298 - -0.5 676,298 - -3.2 676,298 - +0.3 676,298 - +0.4 676,298 - -1.2 676,491 - -0.4 676,578 - B158DRAFT_2494 0.21 +1.0 676,601 - B158DRAFT_2494 0.24 +1.2 676,650 + B158DRAFT_2494 0.31 +0.2 676,658 - B158DRAFT_2494 0.32 -0.0 676,659 + B158DRAFT_2494 0.32 +1.6 676,674 + B158DRAFT_2494 0.34 -1.2 676,851 - B158DRAFT_2494 0.58 -0.8 676,863 + B158DRAFT_2494 0.60 +0.5 676,871 - B158DRAFT_2494 0.61 -0.3 676,894 - B158DRAFT_2494 0.64 -0.5 676,919 + B158DRAFT_2494 0.68 -1.0 676,987 + B158DRAFT_2494 0.77 -0.4 677,014 - B158DRAFT_2494 0.81 -0.2 677,035 + B158DRAFT_2494 0.84 +0.1 677,043 - B158DRAFT_2494 0.85 +0.1 677,043 - B158DRAFT_2494 0.85 +0.6 677,043 - B158DRAFT_2494 0.85 +0.2 677,043 - B158DRAFT_2494 0.85 -0.6 677,043 - B158DRAFT_2494 0.85 -1.1 677,043 - B158DRAFT_2494 0.85 -0.4 677,048 - B158DRAFT_2494 0.85 +1.2 677,050 + B158DRAFT_2494 0.86 -0.0 677,050 + B158DRAFT_2494 0.86 +1.8 677,050 + B158DRAFT_2494 0.86 +1.2 677,050 + B158DRAFT_2494 0.86 -0.2 677,050 + B158DRAFT_2494 0.86 -0.2 677,058 - B158DRAFT_2494 0.87 +0.6 677,058 - B158DRAFT_2494 0.87 +0.6 677,058 - B158DRAFT_2494 0.87 -0.1 677,063 + B158DRAFT_2494 0.88 -0.5 677,068 + B158DRAFT_2494 0.88 -0.7 677,071 - B158DRAFT_2494 0.89 -0.6 677,071 - B158DRAFT_2494 0.89 -1.3 677,071 - B158DRAFT_2494 0.89 -0.8 677,071 - B158DRAFT_2494 0.89 +0.6 677,080 + B158DRAFT_2494 0.90 -0.6 677,086 + +0.8 677,086 + +0.4 677,086 + -1.0 677,086 + +0.6 677,094 - -0.6 677,094 - -0.4 677,094 - +0.0 677,094 - +3.7 677,094 - -1.2 677,114 - -1.2 677,160 + +0.2 677,173 + +0.1 677,231 - -1.7 677,275 + +1.0 677,278 - -0.7 677,356 + +0.3 677,356 + -0.8 677,356 + -0.2 677,363 + +0.0 677,363 + +0.3 677,364 - -1.4 677,364 - +1.4 677,467 + B158DRAFT_2495 0.16 +0.0 677,490 + B158DRAFT_2495 0.17 -1.0 677,498 - B158DRAFT_2495 0.18 +0.0 677,576 + B158DRAFT_2495 0.24 -0.9 677,578 - B158DRAFT_2495 0.24 -1.5 677,589 - B158DRAFT_2495 0.25 +1.2 677,594 - B158DRAFT_2495 0.25 -0.1 677,596 + B158DRAFT_2495 0.25 -0.1 677,604 + B158DRAFT_2495 0.26 +0.6 677,604 + B158DRAFT_2495 0.26 -2.8 677,612 - B158DRAFT_2495 0.26 -0.7 677,612 - B158DRAFT_2495 0.26 +0.6 677,626 - B158DRAFT_2495 0.27 -0.0 677,678 + B158DRAFT_2495 0.31 -1.8 677,735 + B158DRAFT_2495 0.35 -0.4 677,743 - B158DRAFT_2495 0.35 -0.8 677,743 - B158DRAFT_2495 0.35 +0.2 677,767 + B158DRAFT_2495 0.37 -0.2 677,767 + B158DRAFT_2495 0.37 -2.7 677,767 + B158DRAFT_2495 0.37 -0.1 677,767 + B158DRAFT_2495 0.37 -0.7 677,775 - B158DRAFT_2495 0.38 -1.0 677,775 - B158DRAFT_2495 0.38 -2.0 677,775 - B158DRAFT_2495 0.38 +1.8 677,775 - B158DRAFT_2495 0.38 +1.0 677,786 + B158DRAFT_2495 0.39 -1.0 677,796 + B158DRAFT_2495 0.39 -0.5 677,796 + B158DRAFT_2495 0.39 -1.4 677,796 + B158DRAFT_2495 0.39 -0.0 677,796 + B158DRAFT_2495 0.39 +0.6 677,796 + B158DRAFT_2495 0.39 +0.1 677,796 + B158DRAFT_2495 0.39 +0.9 677,796 + B158DRAFT_2495 0.39 -0.1 677,796 + B158DRAFT_2495 0.39 +1.5 677,804 - B158DRAFT_2495 0.40 +1.1 677,804 - B158DRAFT_2495 0.40 -1.2 677,804 - B158DRAFT_2495 0.40 -0.3 677,817 + B158DRAFT_2495 0.41 +0.7 677,825 - B158DRAFT_2495 0.41 +0.9 677,912 - B158DRAFT_2495 0.48 -0.6 677,912 - B158DRAFT_2495 0.48 -1.2 677,937 + B158DRAFT_2495 0.49 -1.4 677,957 + B158DRAFT_2495 0.51 -0.2 677,997 - B158DRAFT_2495 0.54 -1.0 677,999 + B158DRAFT_2495 0.54 -1.1 678,000 - B158DRAFT_2495 0.54 +0.6 678,037 + B158DRAFT_2495 0.56 -0.3 678,077 + B158DRAFT_2495 0.59 +0.1 678,077 + B158DRAFT_2495 0.59 +2.6 678,085 - B158DRAFT_2495 0.60 -0.2 678,090 + B158DRAFT_2495 0.60 +3.0 678,090 + B158DRAFT_2495 0.60 -1.4 678,098 - B158DRAFT_2495 0.61 +4.4 678,098 - B158DRAFT_2495 0.61 -0.2 678,099 + B158DRAFT_2495 0.61 +0.1 678,107 - B158DRAFT_2495 0.61 -0.8 678,147 - B158DRAFT_2495 0.64 -1.9 678,147 - B158DRAFT_2495 0.64 -0.2 678,147 - B158DRAFT_2495 0.64 -1.5
Or see this region's nucleotide sequence