Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2469

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2467 and B158DRAFT_2468 are separated by 10 nucleotidesB158DRAFT_2468 and B158DRAFT_2469 are separated by 11 nucleotidesB158DRAFT_2469 and B158DRAFT_2470 are separated by 91 nucleotidesB158DRAFT_2470 and B158DRAFT_2471 are separated by 189 nucleotides B158DRAFT_2467: B158DRAFT_2467 - Outer membrane cobalamin receptor protein, at 649,723 to 651,681 _2467 B158DRAFT_2468: B158DRAFT_2468 - ATP:cob(I)alamin adenosyltransferase, at 651,692 to 652,240 _2468 B158DRAFT_2469: B158DRAFT_2469 - hypothetical protein, at 652,252 to 652,779 _2469 B158DRAFT_2470: B158DRAFT_2470 - tRNA_Ser_GGA, at 652,871 to 652,961 _2470 B158DRAFT_2471: B158DRAFT_2471 - Restriction endonuclease, at 653,151 to 654,068 _2471 Position (kb) 652 653Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 651.281 kb on - strand, within B158DRAFT_2467at 651.325 kb on - strand, within B158DRAFT_2467at 651.405 kb on - strand, within B158DRAFT_2467at 651.407 kb on + strand, within B158DRAFT_2467at 651.407 kb on + strand, within B158DRAFT_2467at 651.514 kb on + strandat 651.627 kb on + strandat 651.627 kb on + strandat 651.627 kb on + strandat 651.635 kb on - strandat 651.635 kb on - strandat 651.712 kb on + strandat 651.712 kb on + strandat 651.712 kb on + strandat 651.717 kb on + strandat 651.717 kb on + strandat 651.717 kb on + strandat 651.720 kb on - strandat 651.722 kb on + strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.745 kb on - strandat 651.812 kb on - strand, within B158DRAFT_2468at 651.863 kb on + strand, within B158DRAFT_2468at 651.871 kb on - strand, within B158DRAFT_2468at 651.907 kb on + strand, within B158DRAFT_2468at 651.923 kb on + strand, within B158DRAFT_2468at 651.928 kb on + strand, within B158DRAFT_2468at 651.928 kb on + strand, within B158DRAFT_2468at 651.931 kb on - strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.963 kb on - strand, within B158DRAFT_2468at 651.965 kb on - strand, within B158DRAFT_2468at 652.049 kb on - strand, within B158DRAFT_2468at 652.075 kb on + strand, within B158DRAFT_2468at 652.089 kb on + strand, within B158DRAFT_2468at 652.141 kb on + strand, within B158DRAFT_2468at 652.274 kb on + strandat 652.274 kb on + strandat 652.280 kb on + strandat 652.280 kb on + strandat 652.280 kb on + strandat 652.280 kb on + strandat 652.288 kb on - strandat 652.288 kb on - strandat 652.288 kb on - strandat 652.359 kb on + strand, within B158DRAFT_2469at 652.452 kb on + strand, within B158DRAFT_2469at 652.480 kb on + strand, within B158DRAFT_2469at 652.495 kb on - strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.505 kb on - strand, within B158DRAFT_2469at 652.505 kb on - strand, within B158DRAFT_2469at 652.505 kb on - strand, within B158DRAFT_2469at 652.655 kb on - strand, within B158DRAFT_2469at 652.660 kb on + strand, within B158DRAFT_2469at 652.660 kb on + strand, within B158DRAFT_2469at 652.660 kb on + strand, within B158DRAFT_2469at 652.668 kb on - strand, within B158DRAFT_2469at 652.743 kb on + strandat 652.754 kb on + strandat 652.762 kb on - strandat 652.838 kb on + strandat 652.912 kb on + strand, within B158DRAFT_2470at 652.927 kb on - strand, within B158DRAFT_2470at 652.961 kb on + strandat 653.315 kb on + strand, within B158DRAFT_2471at 653.368 kb on - strand, within B158DRAFT_2471at 653.442 kb on + strand, within B158DRAFT_2471at 653.577 kb on + strand, within B158DRAFT_2471at 653.584 kb on + strand, within B158DRAFT_2471at 653.585 kb on - strand, within B158DRAFT_2471at 653.592 kb on - strand, within B158DRAFT_2471at 653.597 kb on - strand, within B158DRAFT_2471at 653.602 kb on + strand, within B158DRAFT_2471at 653.602 kb on - strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.624 kb on + strand, within B158DRAFT_2471at 653.632 kb on - strand, within B158DRAFT_2471at 653.632 kb on - strand, within B158DRAFT_2471at 653.632 kb on - strand, within B158DRAFT_2471at 653.632 kb on - strand, within B158DRAFT_2471at 653.660 kb on + strand, within B158DRAFT_2471at 653.668 kb on - strand, within B158DRAFT_2471at 653.675 kb on + strand, within B158DRAFT_2471at 653.717 kb on - strand, within B158DRAFT_2471

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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651,281 - B158DRAFT_2467 0.80 -0.3
651,325 - B158DRAFT_2467 0.82 -2.7
651,405 - B158DRAFT_2467 0.86 -1.6
651,407 + B158DRAFT_2467 0.86 +0.2
651,407 + B158DRAFT_2467 0.86 +0.0
651,514 + -0.3
651,627 + -1.0
651,627 + -0.7
651,627 + -2.1
651,635 - -1.1
651,635 - -0.4
651,712 + +0.5
651,712 + +0.1
651,712 + -0.6
651,717 + -1.1
651,717 + -1.4
651,717 + +2.5
651,720 - -0.9
651,722 + -0.6
651,725 - +3.2
651,725 - +1.6
651,725 - +0.6
651,725 - +1.3
651,725 - -1.9
651,725 - -1.3
651,745 - -0.5
651,812 - B158DRAFT_2468 0.22 -1.7
651,863 + B158DRAFT_2468 0.31 -3.0
651,871 - B158DRAFT_2468 0.33 -0.6
651,907 + B158DRAFT_2468 0.39 -0.3
651,923 + B158DRAFT_2468 0.42 -1.3
651,928 + B158DRAFT_2468 0.43 -1.6
651,928 + B158DRAFT_2468 0.43 -1.4
651,931 - B158DRAFT_2468 0.44 -1.4
651,933 + B158DRAFT_2468 0.44 -1.3
651,933 + B158DRAFT_2468 0.44 -1.1
651,933 + B158DRAFT_2468 0.44 -2.1
651,933 + B158DRAFT_2468 0.44 -1.2
651,941 - B158DRAFT_2468 0.45 +2.4
651,941 - B158DRAFT_2468 0.45 -0.5
651,941 - B158DRAFT_2468 0.45 -0.9
651,941 - B158DRAFT_2468 0.45 +0.1
651,941 - B158DRAFT_2468 0.45 -2.4
651,963 - B158DRAFT_2468 0.49 -1.1
651,965 - B158DRAFT_2468 0.50 -1.8
652,049 - B158DRAFT_2468 0.65 -0.7
652,075 + B158DRAFT_2468 0.70 -2.1
652,089 + B158DRAFT_2468 0.72 +1.8
652,141 + B158DRAFT_2468 0.82 -1.6
652,274 + -0.4
652,274 + +0.1
652,280 + -0.9
652,280 + -0.7
652,280 + -1.9
652,280 + -2.0
652,288 - -0.8
652,288 - -1.6
652,288 - -1.9
652,359 + B158DRAFT_2469 0.20 -0.7
652,452 + B158DRAFT_2469 0.38 -0.1
652,480 + B158DRAFT_2469 0.43 +1.4
652,495 - B158DRAFT_2469 0.46 +0.2
652,497 + B158DRAFT_2469 0.46 +1.2
652,497 + B158DRAFT_2469 0.46 +1.5
652,497 + B158DRAFT_2469 0.46 +1.3
652,497 + B158DRAFT_2469 0.46 -1.6
652,497 + B158DRAFT_2469 0.46 -2.0
652,505 - B158DRAFT_2469 0.48 -0.7
652,505 - B158DRAFT_2469 0.48 +2.8
652,505 - B158DRAFT_2469 0.48 +0.4
652,655 - B158DRAFT_2469 0.76 -1.5
652,660 + B158DRAFT_2469 0.77 +3.7
652,660 + B158DRAFT_2469 0.77 -0.4
652,660 + B158DRAFT_2469 0.77 -0.8
652,668 - B158DRAFT_2469 0.79 -1.3
652,743 + -2.7
652,754 + +2.5
652,762 - -3.0
652,838 + -0.4
652,912 + B158DRAFT_2470 0.45 +4.5
652,927 - B158DRAFT_2470 0.62 +4.7
652,961 + -0.3
653,315 + B158DRAFT_2471 0.18 -3.0
653,368 - B158DRAFT_2471 0.24 +0.2
653,442 + B158DRAFT_2471 0.32 +2.0
653,577 + B158DRAFT_2471 0.46 -0.4
653,584 + B158DRAFT_2471 0.47 -1.5
653,585 - B158DRAFT_2471 0.47 -0.5
653,592 - B158DRAFT_2471 0.48 -2.5
653,597 - B158DRAFT_2471 0.49 -1.0
653,602 + B158DRAFT_2471 0.49 -0.8
653,602 - B158DRAFT_2471 0.49 -0.1
653,624 + B158DRAFT_2471 0.52 -2.3
653,624 + B158DRAFT_2471 0.52 +0.6
653,624 + B158DRAFT_2471 0.52 -1.5
653,624 + B158DRAFT_2471 0.52 -0.4
653,624 + B158DRAFT_2471 0.52 +1.2
653,624 + B158DRAFT_2471 0.52 -0.7
653,624 + B158DRAFT_2471 0.52 -1.3
653,624 + B158DRAFT_2471 0.52 +1.5
653,632 - B158DRAFT_2471 0.52 -1.1
653,632 - B158DRAFT_2471 0.52 +2.3
653,632 - B158DRAFT_2471 0.52 +2.4
653,632 - B158DRAFT_2471 0.52 +3.8
653,660 + B158DRAFT_2471 0.55 -0.6
653,668 - B158DRAFT_2471 0.56 +0.3
653,675 + B158DRAFT_2471 0.57 -1.2
653,717 - B158DRAFT_2471 0.62 -0.0

Or see this region's nucleotide sequence