Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2464 and B158DRAFT_2465 are separated by 140 nucleotides B158DRAFT_2465 and B158DRAFT_2466 are separated by 72 nucleotides
B158DRAFT_2464: B158DRAFT_2464 - Outer membrane protein, at 643,604 to 644,959
_2464
B158DRAFT_2465: B158DRAFT_2465 - hypothetical protein, at 645,100 to 645,510
_2465
B158DRAFT_2466: B158DRAFT_2466 - methionine synthase (B12-dependent) (EC 2.1.1.13), at 645,583 to 649,266
_2466
Position (kb) 645
646 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 644.381 kb on - strand, within B158DRAFT_2464 at 644.419 kb on + strand, within B158DRAFT_2464 at 644.465 kb on - strand, within B158DRAFT_2464 at 644.476 kb on + strand, within B158DRAFT_2464 at 644.491 kb on - strand, within B158DRAFT_2464 at 644.491 kb on - strand, within B158DRAFT_2464 at 644.578 kb on - strand, within B158DRAFT_2464 at 644.625 kb on + strand, within B158DRAFT_2464 at 644.625 kb on + strand, within B158DRAFT_2464 at 644.625 kb on + strand, within B158DRAFT_2464 at 644.633 kb on - strand, within B158DRAFT_2464 at 644.633 kb on - strand, within B158DRAFT_2464 at 644.633 kb on - strand, within B158DRAFT_2464 at 644.643 kb on - strand, within B158DRAFT_2464 at 644.677 kb on + strand, within B158DRAFT_2464 at 644.735 kb on + strand, within B158DRAFT_2464 at 644.751 kb on - strand, within B158DRAFT_2464 at 644.762 kb on + strand, within B158DRAFT_2464 at 644.853 kb on - strand at 644.853 kb on - strand at 644.883 kb on - strand at 645.031 kb on - strand at 645.070 kb on + strand at 645.070 kb on + strand at 645.078 kb on - strand at 645.078 kb on - strand at 645.078 kb on - strand at 645.078 kb on - strand at 645.087 kb on + strand at 645.087 kb on + strand at 645.087 kb on + strand at 645.087 kb on + strand at 645.095 kb on - strand at 645.095 kb on - strand at 645.099 kb on + strand at 645.128 kb on + strand at 645.148 kb on + strand, within B158DRAFT_2465 at 645.209 kb on + strand, within B158DRAFT_2465 at 645.223 kb on + strand, within B158DRAFT_2465 at 645.231 kb on - strand, within B158DRAFT_2465 at 645.272 kb on - strand, within B158DRAFT_2465 at 645.324 kb on - strand, within B158DRAFT_2465 at 645.328 kb on + strand, within B158DRAFT_2465 at 645.328 kb on + strand, within B158DRAFT_2465 at 645.338 kb on + strand, within B158DRAFT_2465 at 645.343 kb on + strand, within B158DRAFT_2465 at 645.346 kb on - strand, within B158DRAFT_2465 at 645.350 kb on - strand, within B158DRAFT_2465 at 645.393 kb on + strand, within B158DRAFT_2465 at 645.393 kb on + strand, within B158DRAFT_2465 at 645.408 kb on + strand, within B158DRAFT_2465 at 645.457 kb on + strand, within B158DRAFT_2465 at 645.465 kb on - strand, within B158DRAFT_2465 at 645.470 kb on - strand at 645.490 kb on + strand at 645.506 kb on - strand at 645.539 kb on - strand at 645.600 kb on + strand at 645.603 kb on - strand at 645.606 kb on + strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.626 kb on + strand at 645.634 kb on + strand at 645.634 kb on + strand at 645.641 kb on + strand at 645.641 kb on + strand at 645.649 kb on - strand at 645.649 kb on - strand at 645.649 kb on - strand at 645.659 kb on - strand at 645.659 kb on - strand at 645.688 kb on - strand at 645.727 kb on + strand at 645.740 kb on + strand at 645.743 kb on + strand at 645.767 kb on + strand at 645.779 kb on + strand at 645.813 kb on - strand at 645.813 kb on - strand at 645.815 kb on + strand at 645.823 kb on - strand at 645.825 kb on + strand at 645.849 kb on - strand at 645.850 kb on + strand at 645.850 kb on + strand at 645.850 kb on + strand at 645.850 kb on + strand at 645.858 kb on - strand at 645.858 kb on - strand at 645.858 kb on - strand at 645.858 kb on - strand at 645.860 kb on + strand at 645.860 kb on + strand at 645.896 kb on + strand at 645.970 kb on + strand, within B158DRAFT_2466 at 645.983 kb on + strand, within B158DRAFT_2466 at 646.034 kb on - strand, within B158DRAFT_2466 at 646.040 kb on + strand, within B158DRAFT_2466 at 646.085 kb on + strand, within B158DRAFT_2466 at 646.219 kb on - strand, within B158DRAFT_2466 at 646.223 kb on + strand, within B158DRAFT_2466 at 646.238 kb on - strand, within B158DRAFT_2466
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 644,381 - B158DRAFT_2464 0.57 -3.0 644,419 + B158DRAFT_2464 0.60 -0.7 644,465 - B158DRAFT_2464 0.63 +0.2 644,476 + B158DRAFT_2464 0.64 +0.3 644,491 - B158DRAFT_2464 0.65 -0.8 644,491 - B158DRAFT_2464 0.65 +0.5 644,578 - B158DRAFT_2464 0.72 -0.7 644,625 + B158DRAFT_2464 0.75 +0.7 644,625 + B158DRAFT_2464 0.75 -0.4 644,625 + B158DRAFT_2464 0.75 -1.3 644,633 - B158DRAFT_2464 0.76 -1.2 644,633 - B158DRAFT_2464 0.76 -2.4 644,633 - B158DRAFT_2464 0.76 -0.0 644,643 - B158DRAFT_2464 0.77 +0.3 644,677 + B158DRAFT_2464 0.79 -2.8 644,735 + B158DRAFT_2464 0.83 -2.0 644,751 - B158DRAFT_2464 0.85 -1.9 644,762 + B158DRAFT_2464 0.85 -0.8 644,853 - -0.4 644,853 - +0.6 644,883 - +0.6 645,031 - -0.1 645,070 + +1.0 645,070 + -1.5 645,078 - -1.5 645,078 - -0.1 645,078 - -0.4 645,078 - -0.7 645,087 + -1.4 645,087 + +1.1 645,087 + +2.2 645,087 + +0.5 645,095 - -2.4 645,095 - -0.4 645,099 + -1.1 645,128 + -1.3 645,148 + B158DRAFT_2465 0.12 +0.5 645,209 + B158DRAFT_2465 0.27 +0.3 645,223 + B158DRAFT_2465 0.30 +0.4 645,231 - B158DRAFT_2465 0.32 -0.5 645,272 - B158DRAFT_2465 0.42 -1.1 645,324 - B158DRAFT_2465 0.55 -1.2 645,328 + B158DRAFT_2465 0.55 +1.5 645,328 + B158DRAFT_2465 0.55 -0.5 645,338 + B158DRAFT_2465 0.58 -1.3 645,343 + B158DRAFT_2465 0.59 -0.9 645,346 - B158DRAFT_2465 0.60 +0.7 645,350 - B158DRAFT_2465 0.61 -1.6 645,393 + B158DRAFT_2465 0.71 +1.9 645,393 + B158DRAFT_2465 0.71 -0.7 645,408 + B158DRAFT_2465 0.75 -0.5 645,457 + B158DRAFT_2465 0.87 -2.3 645,465 - B158DRAFT_2465 0.89 +0.7 645,470 - +1.4 645,490 + +0.9 645,506 - +0.6 645,539 - +1.2 645,600 + -1.1 645,603 - -0.2 645,606 + -0.3 645,608 - -0.8 645,608 - +0.2 645,608 - -0.7 645,608 - +1.0 645,608 - -1.3 645,626 + -0.7 645,634 + -0.4 645,634 + -0.0 645,641 + -1.0 645,641 + -0.7 645,649 - +1.0 645,649 - +0.3 645,649 - -0.8 645,659 - -0.4 645,659 - -0.8 645,688 - -3.1 645,727 + -0.9 645,740 + +0.4 645,743 + -0.9 645,767 + +0.4 645,779 + -1.7 645,813 - +1.8 645,813 - -2.1 645,815 + -0.8 645,823 - -0.4 645,825 + +0.1 645,849 - +1.0 645,850 + -2.8 645,850 + -0.4 645,850 + -1.1 645,850 + +0.5 645,858 - +1.7 645,858 - +0.2 645,858 - -0.1 645,858 - -1.3 645,860 + -1.5 645,860 + +0.2 645,896 + +1.7 645,970 + B158DRAFT_2466 0.11 -1.4 645,983 + B158DRAFT_2466 0.11 +0.8 646,034 - B158DRAFT_2466 0.12 +0.6 646,040 + B158DRAFT_2466 0.12 -1.0 646,085 + B158DRAFT_2466 0.14 +0.9 646,219 - B158DRAFT_2466 0.17 +1.0 646,223 + B158DRAFT_2466 0.17 -2.1 646,238 - B158DRAFT_2466 0.18 -1.3
Or see this region's nucleotide sequence