Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2452

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2451 and B158DRAFT_2452 are separated by 7 nucleotidesB158DRAFT_2452 and B158DRAFT_2453 are separated by 141 nucleotides B158DRAFT_2451: B158DRAFT_2451 - saccharopine dehydrogenase (NADP+, L-glutamate forming) (EC 1.5.1.10), at 624,696 to 626,021 _2451 B158DRAFT_2452: B158DRAFT_2452 - Protease II, at 626,029 to 628,182 _2452 B158DRAFT_2453: B158DRAFT_2453 - quinolinate synthetase (EC 2.5.1.72), at 628,324 to 629,385 _2453 Position (kb) 626 627 628 629Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 625.041 kb on - strand, within B158DRAFT_2451at 625.062 kb on + strand, within B158DRAFT_2451at 625.070 kb on - strand, within B158DRAFT_2451at 625.070 kb on - strand, within B158DRAFT_2451at 625.259 kb on - strand, within B158DRAFT_2451at 625.299 kb on + strand, within B158DRAFT_2451at 625.299 kb on + strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.309 kb on + strand, within B158DRAFT_2451at 625.332 kb on + strand, within B158DRAFT_2451at 625.364 kb on + strand, within B158DRAFT_2451at 625.372 kb on - strand, within B158DRAFT_2451at 625.372 kb on - strand, within B158DRAFT_2451at 625.372 kb on - strand, within B158DRAFT_2451at 625.432 kb on + strand, within B158DRAFT_2451at 625.432 kb on + strand, within B158DRAFT_2451at 625.537 kb on + strand, within B158DRAFT_2451at 625.537 kb on + strand, within B158DRAFT_2451at 625.537 kb on + strand, within B158DRAFT_2451at 625.547 kb on + strand, within B158DRAFT_2451at 625.547 kb on + strand, within B158DRAFT_2451at 625.555 kb on - strand, within B158DRAFT_2451at 625.555 kb on - strand, within B158DRAFT_2451at 625.600 kb on + strand, within B158DRAFT_2451at 625.607 kb on - strand, within B158DRAFT_2451at 625.608 kb on - strand, within B158DRAFT_2451at 625.618 kb on - strand, within B158DRAFT_2451at 625.699 kb on + strand, within B158DRAFT_2451at 625.705 kb on - strand, within B158DRAFT_2451at 625.707 kb on - strand, within B158DRAFT_2451at 625.707 kb on - strand, within B158DRAFT_2451at 625.803 kb on + strand, within B158DRAFT_2451at 625.803 kb on + strand, within B158DRAFT_2451at 625.811 kb on + strand, within B158DRAFT_2451at 625.819 kb on - strand, within B158DRAFT_2451at 625.823 kb on + strand, within B158DRAFT_2451at 625.863 kb on - strand, within B158DRAFT_2451at 625.901 kb on - strandat 625.901 kb on - strandat 626.066 kb on + strandat 626.066 kb on + strandat 626.066 kb on + strandat 626.066 kb on + strandat 626.074 kb on - strandat 626.091 kb on + strandat 626.169 kb on + strandat 626.223 kb on + strandat 626.229 kb on + strandat 626.231 kb on - strandat 626.231 kb on - strandat 626.264 kb on + strand, within B158DRAFT_2452at 626.282 kb on + strand, within B158DRAFT_2452at 626.300 kb on - strand, within B158DRAFT_2452at 626.311 kb on + strand, within B158DRAFT_2452at 626.368 kb on - strand, within B158DRAFT_2452at 626.368 kb on - strand, within B158DRAFT_2452at 626.423 kb on + strand, within B158DRAFT_2452at 626.439 kb on - strand, within B158DRAFT_2452at 626.439 kb on - strand, within B158DRAFT_2452at 626.457 kb on + strand, within B158DRAFT_2452at 626.487 kb on - strand, within B158DRAFT_2452at 626.487 kb on - strand, within B158DRAFT_2452at 626.544 kb on - strand, within B158DRAFT_2452at 626.614 kb on + strand, within B158DRAFT_2452at 626.622 kb on - strand, within B158DRAFT_2452at 626.624 kb on - strand, within B158DRAFT_2452at 626.629 kb on + strand, within B158DRAFT_2452at 626.694 kb on - strand, within B158DRAFT_2452at 626.723 kb on + strand, within B158DRAFT_2452at 626.730 kb on - strand, within B158DRAFT_2452at 626.741 kb on - strand, within B158DRAFT_2452at 626.782 kb on - strand, within B158DRAFT_2452at 626.897 kb on + strand, within B158DRAFT_2452at 626.905 kb on - strand, within B158DRAFT_2452at 626.906 kb on + strand, within B158DRAFT_2452at 626.921 kb on + strand, within B158DRAFT_2452at 626.923 kb on + strand, within B158DRAFT_2452at 626.924 kb on - strand, within B158DRAFT_2452at 626.924 kb on - strand, within B158DRAFT_2452at 626.924 kb on - strand, within B158DRAFT_2452at 626.929 kb on - strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.961 kb on + strand, within B158DRAFT_2452at 626.967 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 626.969 kb on - strand, within B158DRAFT_2452at 627.029 kb on + strand, within B158DRAFT_2452at 627.029 kb on + strand, within B158DRAFT_2452at 627.029 kb on + strand, within B158DRAFT_2452at 627.029 kb on + strand, within B158DRAFT_2452at 627.037 kb on - strand, within B158DRAFT_2452at 627.039 kb on + strand, within B158DRAFT_2452at 627.039 kb on + strand, within B158DRAFT_2452at 627.039 kb on + strand, within B158DRAFT_2452at 627.039 kb on + strand, within B158DRAFT_2452at 627.039 kb on + strand, within B158DRAFT_2452at 627.039 kb on + strand, within B158DRAFT_2452at 627.044 kb on + strand, within B158DRAFT_2452at 627.047 kb on - strand, within B158DRAFT_2452at 627.047 kb on - strand, within B158DRAFT_2452at 627.047 kb on - strand, within B158DRAFT_2452at 627.047 kb on - strand, within B158DRAFT_2452at 627.062 kb on + strand, within B158DRAFT_2452at 627.062 kb on + strand, within B158DRAFT_2452at 627.070 kb on - strand, within B158DRAFT_2452at 627.070 kb on - strand, within B158DRAFT_2452at 627.102 kb on + strand, within B158DRAFT_2452at 627.102 kb on + strand, within B158DRAFT_2452at 627.107 kb on + strand, within B158DRAFT_2452at 627.115 kb on + strand, within B158DRAFT_2452at 627.115 kb on - strand, within B158DRAFT_2452at 627.149 kb on - strand, within B158DRAFT_2452at 627.203 kb on + strand, within B158DRAFT_2452at 627.316 kb on + strand, within B158DRAFT_2452at 627.326 kb on + strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.349 kb on + strand, within B158DRAFT_2452at 627.357 kb on - strand, within B158DRAFT_2452at 627.369 kb on + strand, within B158DRAFT_2452at 627.369 kb on + strand, within B158DRAFT_2452at 627.377 kb on - strand, within B158DRAFT_2452at 627.402 kb on - strand, within B158DRAFT_2452at 627.404 kb on - strand, within B158DRAFT_2452at 627.417 kb on + strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.457 kb on - strand, within B158DRAFT_2452at 627.483 kb on + strand, within B158DRAFT_2452at 627.485 kb on - strand, within B158DRAFT_2452at 627.667 kb on + strand, within B158DRAFT_2452at 627.716 kb on + strand, within B158DRAFT_2452at 627.723 kb on + strand, within B158DRAFT_2452at 627.756 kb on + strand, within B158DRAFT_2452at 627.756 kb on + strand, within B158DRAFT_2452at 627.756 kb on - strand, within B158DRAFT_2452at 627.764 kb on - strand, within B158DRAFT_2452at 627.764 kb on - strand, within B158DRAFT_2452at 627.843 kb on - strand, within B158DRAFT_2452at 627.853 kb on - strand, within B158DRAFT_2452at 627.855 kb on + strand, within B158DRAFT_2452at 627.914 kb on - strand, within B158DRAFT_2452at 627.952 kb on - strand, within B158DRAFT_2452at 627.986 kb on + strandat 627.986 kb on + strandat 627.994 kb on - strandat 628.053 kb on + strandat 628.068 kb on + strandat 628.087 kb on - strandat 628.092 kb on - strandat 628.105 kb on + strandat 628.107 kb on - strandat 628.107 kb on - strandat 628.133 kb on + strandat 628.197 kb on + strandat 628.200 kb on - strandat 628.282 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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625,041 - B158DRAFT_2451 0.26 +2.2
625,062 + B158DRAFT_2451 0.28 +1.1
625,070 - B158DRAFT_2451 0.28 +0.3
625,070 - B158DRAFT_2451 0.28 +0.4
625,259 - B158DRAFT_2451 0.42 +1.0
625,299 + B158DRAFT_2451 0.45 +0.2
625,299 + B158DRAFT_2451 0.45 +1.1
625,307 - B158DRAFT_2451 0.46 +1.2
625,307 - B158DRAFT_2451 0.46 +0.7
625,307 - B158DRAFT_2451 0.46 +4.0
625,307 - B158DRAFT_2451 0.46 -0.1
625,307 - B158DRAFT_2451 0.46 +1.5
625,307 - B158DRAFT_2451 0.46 +0.8
625,309 + B158DRAFT_2451 0.46 +1.1
625,332 + B158DRAFT_2451 0.48 +0.0
625,364 + B158DRAFT_2451 0.50 -0.6
625,372 - B158DRAFT_2451 0.51 -1.0
625,372 - B158DRAFT_2451 0.51 +1.7
625,372 - B158DRAFT_2451 0.51 +0.8
625,432 + B158DRAFT_2451 0.56 +1.2
625,432 + B158DRAFT_2451 0.56 +1.1
625,537 + B158DRAFT_2451 0.63 +0.5
625,537 + B158DRAFT_2451 0.63 +1.3
625,537 + B158DRAFT_2451 0.63 +1.0
625,547 + B158DRAFT_2451 0.64 -0.2
625,547 + B158DRAFT_2451 0.64 +0.7
625,555 - B158DRAFT_2451 0.65 +1.2
625,555 - B158DRAFT_2451 0.65 +3.3
625,600 + B158DRAFT_2451 0.68 +1.6
625,607 - B158DRAFT_2451 0.69 -0.4
625,608 - B158DRAFT_2451 0.69 +4.8
625,618 - B158DRAFT_2451 0.70 -0.2
625,699 + B158DRAFT_2451 0.76 +1.3
625,705 - B158DRAFT_2451 0.76 +5.3
625,707 - B158DRAFT_2451 0.76 +1.1
625,707 - B158DRAFT_2451 0.76 +1.9
625,803 + B158DRAFT_2451 0.83 +1.1
625,803 + B158DRAFT_2451 0.83 +3.3
625,811 + B158DRAFT_2451 0.84 +0.2
625,819 - B158DRAFT_2451 0.85 +2.1
625,823 + B158DRAFT_2451 0.85 +1.8
625,863 - B158DRAFT_2451 0.88 +0.1
625,901 - +1.1
625,901 - +2.1
626,066 + +0.5
626,066 + -0.6
626,066 + -0.1
626,066 + -1.4
626,074 - -1.5
626,091 + -0.7
626,169 + +0.0
626,223 + +0.9
626,229 + +1.7
626,231 - +1.5
626,231 - +0.3
626,264 + B158DRAFT_2452 0.11 -1.1
626,282 + B158DRAFT_2452 0.12 +0.0
626,300 - B158DRAFT_2452 0.13 +0.4
626,311 + B158DRAFT_2452 0.13 -0.4
626,368 - B158DRAFT_2452 0.16 -3.4
626,368 - B158DRAFT_2452 0.16 -2.7
626,423 + B158DRAFT_2452 0.18 -1.6
626,439 - B158DRAFT_2452 0.19 +1.0
626,439 - B158DRAFT_2452 0.19 -1.2
626,457 + B158DRAFT_2452 0.20 -1.7
626,487 - B158DRAFT_2452 0.21 +2.2
626,487 - B158DRAFT_2452 0.21 -0.6
626,544 - B158DRAFT_2452 0.24 -0.5
626,614 + B158DRAFT_2452 0.27 -1.5
626,622 - B158DRAFT_2452 0.28 -1.9
626,624 - B158DRAFT_2452 0.28 -0.5
626,629 + B158DRAFT_2452 0.28 -1.0
626,694 - B158DRAFT_2452 0.31 -2.4
626,723 + B158DRAFT_2452 0.32 -0.4
626,730 - B158DRAFT_2452 0.33 -2.2
626,741 - B158DRAFT_2452 0.33 +0.1
626,782 - B158DRAFT_2452 0.35 -2.4
626,897 + B158DRAFT_2452 0.40 -2.3
626,905 - B158DRAFT_2452 0.41 -1.4
626,906 + B158DRAFT_2452 0.41 +0.2
626,921 + B158DRAFT_2452 0.41 -1.2
626,923 + B158DRAFT_2452 0.42 -1.2
626,924 - B158DRAFT_2452 0.42 +0.3
626,924 - B158DRAFT_2452 0.42 -2.2
626,924 - B158DRAFT_2452 0.42 -0.8
626,929 - B158DRAFT_2452 0.42 +0.6
626,961 + B158DRAFT_2452 0.43 +0.2
626,961 + B158DRAFT_2452 0.43 -0.7
626,961 + B158DRAFT_2452 0.43 -0.6
626,961 + B158DRAFT_2452 0.43 +0.4
626,961 + B158DRAFT_2452 0.43 +0.8
626,961 + B158DRAFT_2452 0.43 +0.1
626,961 + B158DRAFT_2452 0.43 -1.5
626,961 + B158DRAFT_2452 0.43 -1.7
626,961 + B158DRAFT_2452 0.43 +0.3
626,961 + B158DRAFT_2452 0.43 +1.7
626,961 + B158DRAFT_2452 0.43 -1.5
626,967 - B158DRAFT_2452 0.44 -0.4
626,969 - B158DRAFT_2452 0.44 -0.8
626,969 - B158DRAFT_2452 0.44 -1.2
626,969 - B158DRAFT_2452 0.44 -0.8
626,969 - B158DRAFT_2452 0.44 -2.0
626,969 - B158DRAFT_2452 0.44 +0.8
626,969 - B158DRAFT_2452 0.44 +0.8
626,969 - B158DRAFT_2452 0.44 +0.1
626,969 - B158DRAFT_2452 0.44 +0.4
626,969 - B158DRAFT_2452 0.44 -2.2
626,969 - B158DRAFT_2452 0.44 -2.5
626,969 - B158DRAFT_2452 0.44 +0.2
626,969 - B158DRAFT_2452 0.44 -0.6
626,969 - B158DRAFT_2452 0.44 -1.6
626,969 - B158DRAFT_2452 0.44 -0.1
626,969 - B158DRAFT_2452 0.44 -0.6
626,969 - B158DRAFT_2452 0.44 -1.5
626,969 - B158DRAFT_2452 0.44 -1.7
626,969 - B158DRAFT_2452 0.44 -0.2
626,969 - B158DRAFT_2452 0.44 -1.6
626,969 - B158DRAFT_2452 0.44 -1.4
626,969 - B158DRAFT_2452 0.44 -1.7
627,029 + B158DRAFT_2452 0.46 -0.4
627,029 + B158DRAFT_2452 0.46 -0.3
627,029 + B158DRAFT_2452 0.46 -0.9
627,029 + B158DRAFT_2452 0.46 -0.8
627,037 - B158DRAFT_2452 0.47 +1.3
627,039 + B158DRAFT_2452 0.47 -0.9
627,039 + B158DRAFT_2452 0.47 +0.1
627,039 + B158DRAFT_2452 0.47 -2.1
627,039 + B158DRAFT_2452 0.47 -1.3
627,039 + B158DRAFT_2452 0.47 +1.7
627,039 + B158DRAFT_2452 0.47 -0.8
627,044 + B158DRAFT_2452 0.47 -0.3
627,047 - B158DRAFT_2452 0.47 +0.1
627,047 - B158DRAFT_2452 0.47 -2.5
627,047 - B158DRAFT_2452 0.47 -0.7
627,047 - B158DRAFT_2452 0.47 -0.5
627,062 + B158DRAFT_2452 0.48 -1.0
627,062 + B158DRAFT_2452 0.48 +0.6
627,070 - B158DRAFT_2452 0.48 -0.0
627,070 - B158DRAFT_2452 0.48 -0.4
627,102 + B158DRAFT_2452 0.50 -1.3
627,102 + B158DRAFT_2452 0.50 -0.2
627,107 + B158DRAFT_2452 0.50 -1.1
627,115 + B158DRAFT_2452 0.50 -2.5
627,115 - B158DRAFT_2452 0.50 +0.2
627,149 - B158DRAFT_2452 0.52 -0.7
627,203 + B158DRAFT_2452 0.55 -0.8
627,316 + B158DRAFT_2452 0.60 -1.6
627,326 + B158DRAFT_2452 0.60 -1.1
627,334 - B158DRAFT_2452 0.61 -0.1
627,334 - B158DRAFT_2452 0.61 -0.1
627,334 - B158DRAFT_2452 0.61 -1.3
627,334 - B158DRAFT_2452 0.61 -0.1
627,349 + B158DRAFT_2452 0.61 -1.3
627,357 - B158DRAFT_2452 0.62 -0.4
627,369 + B158DRAFT_2452 0.62 +0.2
627,369 + B158DRAFT_2452 0.62 +2.6
627,377 - B158DRAFT_2452 0.63 -0.8
627,402 - B158DRAFT_2452 0.64 -1.2
627,404 - B158DRAFT_2452 0.64 -1.0
627,417 + B158DRAFT_2452 0.64 -0.1
627,425 - B158DRAFT_2452 0.65 -0.6
627,425 - B158DRAFT_2452 0.65 -1.3
627,425 - B158DRAFT_2452 0.65 -0.6
627,425 - B158DRAFT_2452 0.65 +0.5
627,425 - B158DRAFT_2452 0.65 +0.1
627,425 - B158DRAFT_2452 0.65 -1.6
627,457 - B158DRAFT_2452 0.66 -1.0
627,483 + B158DRAFT_2452 0.68 -1.6
627,485 - B158DRAFT_2452 0.68 -1.5
627,667 + B158DRAFT_2452 0.76 +0.5
627,716 + B158DRAFT_2452 0.78 -0.2
627,723 + B158DRAFT_2452 0.79 -0.1
627,756 + B158DRAFT_2452 0.80 -0.0
627,756 + B158DRAFT_2452 0.80 -1.2
627,756 - B158DRAFT_2452 0.80 -1.4
627,764 - B158DRAFT_2452 0.81 +1.5
627,764 - B158DRAFT_2452 0.81 +1.3
627,843 - B158DRAFT_2452 0.84 +0.8
627,853 - B158DRAFT_2452 0.85 +0.4
627,855 + B158DRAFT_2452 0.85 +0.8
627,914 - B158DRAFT_2452 0.88 -0.5
627,952 - B158DRAFT_2452 0.89 -0.0
627,986 + -1.6
627,986 + -1.0
627,994 - -1.1
628,053 + -1.1
628,068 + +0.7
628,087 - -0.7
628,092 - +3.0
628,105 + +0.7
628,107 - -0.6
628,107 - +0.3
628,133 + +0.4
628,197 + -0.2
628,200 - +0.2
628,282 - -0.9

Or see this region's nucleotide sequence