Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2444

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2442 and B158DRAFT_2443 are separated by 22 nucleotidesB158DRAFT_2443 and B158DRAFT_2444 are separated by 174 nucleotidesB158DRAFT_2444 and B158DRAFT_2445 overlap by 17 nucleotides B158DRAFT_2442: B158DRAFT_2442 - Predicted ATPase related to phosphate starvation-inducible protein PhoH, at 614,885 to 616,306 _2442 B158DRAFT_2443: B158DRAFT_2443 - Peroxiredoxin, at 616,329 to 616,796 _2443 B158DRAFT_2444: B158DRAFT_2444 - dihydrodipicolinate synthase, at 616,971 to 617,852 _2444 B158DRAFT_2445: B158DRAFT_2445 - Beta-barrel assembly machine subunit BamC, at 617,836 to 618,918 _2445 Position (kb) 616 617 618Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 616.042 kb on + strand, within B158DRAFT_2442at 616.043 kb on + strand, within B158DRAFT_2442at 616.050 kb on - strand, within B158DRAFT_2442at 616.051 kb on - strand, within B158DRAFT_2442at 616.068 kb on + strand, within B158DRAFT_2442at 616.068 kb on + strand, within B158DRAFT_2442at 616.076 kb on + strand, within B158DRAFT_2442at 616.076 kb on + strand, within B158DRAFT_2442at 616.076 kb on + strand, within B158DRAFT_2442at 616.084 kb on - strand, within B158DRAFT_2442at 616.084 kb on - strand, within B158DRAFT_2442at 616.084 kb on - strand, within B158DRAFT_2442at 616.084 kb on - strand, within B158DRAFT_2442at 616.172 kb on + strandat 616.178 kb on - strandat 616.178 kb on - strandat 616.180 kb on - strandat 616.188 kb on - strandat 616.224 kb on - strandat 616.224 kb on - strandat 616.226 kb on + strandat 616.226 kb on + strandat 616.234 kb on - strandat 616.234 kb on - strandat 616.234 kb on - strandat 616.234 kb on - strandat 616.234 kb on - strandat 616.279 kb on - strandat 616.314 kb on + strandat 616.324 kb on - strandat 616.336 kb on + strandat 616.429 kb on + strand, within B158DRAFT_2443at 616.437 kb on - strand, within B158DRAFT_2443at 616.492 kb on + strand, within B158DRAFT_2443at 616.492 kb on + strand, within B158DRAFT_2443at 616.492 kb on + strand, within B158DRAFT_2443at 616.492 kb on + strand, within B158DRAFT_2443at 616.500 kb on - strand, within B158DRAFT_2443at 616.500 kb on - strand, within B158DRAFT_2443at 616.502 kb on + strand, within B158DRAFT_2443at 616.503 kb on + strand, within B158DRAFT_2443at 616.534 kb on - strand, within B158DRAFT_2443at 616.547 kb on - strand, within B158DRAFT_2443at 616.557 kb on + strand, within B158DRAFT_2443at 616.565 kb on - strand, within B158DRAFT_2443at 616.565 kb on - strand, within B158DRAFT_2443at 616.568 kb on + strand, within B158DRAFT_2443at 616.576 kb on - strand, within B158DRAFT_2443at 616.576 kb on - strand, within B158DRAFT_2443at 616.576 kb on - strand, within B158DRAFT_2443at 616.576 kb on - strand, within B158DRAFT_2443at 616.641 kb on + strand, within B158DRAFT_2443at 616.641 kb on + strand, within B158DRAFT_2443at 616.649 kb on - strand, within B158DRAFT_2443at 616.649 kb on - strand, within B158DRAFT_2443at 616.657 kb on - strand, within B158DRAFT_2443at 616.789 kb on - strandat 616.791 kb on + strandat 616.799 kb on - strandat 616.799 kb on - strandat 616.799 kb on - strandat 616.814 kb on + strandat 616.814 kb on + strandat 616.926 kb on + strandat 616.926 kb on + strandat 616.926 kb on + strandat 617.877 kb on + strandat 617.877 kb on - strandat 617.900 kb on - strandat 617.931 kb on + strandat 617.931 kb on + strandat 617.931 kb on + strandat 617.939 kb on - strandat 617.939 kb on - strandat 617.995 kb on + strand, within B158DRAFT_2445at 617.998 kb on - strand, within B158DRAFT_2445at 618.072 kb on + strand, within B158DRAFT_2445at 618.091 kb on + strand, within B158DRAFT_2445at 618.128 kb on + strand, within B158DRAFT_2445at 618.138 kb on + strand, within B158DRAFT_2445at 618.151 kb on + strand, within B158DRAFT_2445at 618.239 kb on + strand, within B158DRAFT_2445at 618.274 kb on + strand, within B158DRAFT_2445at 618.324 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.338 kb on + strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.374 kb on + strand, within B158DRAFT_2445at 618.376 kb on + strand, within B158DRAFT_2445at 618.396 kb on + strand, within B158DRAFT_2445at 618.409 kb on + strandat 618.438 kb on + strand, within B158DRAFT_2445at 618.479 kb on + strand, within B158DRAFT_2445at 618.483 kb on + strand, within B158DRAFT_2445at 618.506 kb on - strand, within B158DRAFT_2445at 618.521 kb on + strand, within B158DRAFT_2445at 618.549 kb on + strand, within B158DRAFT_2445at 618.554 kb on + strand, within B158DRAFT_2445at 618.557 kb on - strand, within B158DRAFT_2445at 618.562 kb on - strand, within B158DRAFT_2445at 618.645 kb on - strand, within B158DRAFT_2445at 618.645 kb on - strand, within B158DRAFT_2445at 618.645 kb on - strand, within B158DRAFT_2445at 618.761 kb on + strand, within B158DRAFT_2445at 618.813 kb on + strandat 618.813 kb on + strandat 618.822 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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616,042 + B158DRAFT_2442 0.81 +0.6
616,043 + B158DRAFT_2442 0.81 -0.8
616,050 - B158DRAFT_2442 0.82 +2.6
616,051 - B158DRAFT_2442 0.82 -0.6
616,068 + B158DRAFT_2442 0.83 +0.6
616,068 + B158DRAFT_2442 0.83 -0.4
616,076 + B158DRAFT_2442 0.84 +1.0
616,076 + B158DRAFT_2442 0.84 -2.1
616,076 + B158DRAFT_2442 0.84 +2.0
616,084 - B158DRAFT_2442 0.84 +3.5
616,084 - B158DRAFT_2442 0.84 -2.7
616,084 - B158DRAFT_2442 0.84 +1.2
616,084 - B158DRAFT_2442 0.84 +3.6
616,172 + -0.5
616,178 - +0.2
616,178 - -0.8
616,180 - -0.2
616,188 - -1.4
616,224 - -2.7
616,224 - +0.0
616,226 + -0.6
616,226 + -1.5
616,234 - +1.0
616,234 - +0.9
616,234 - -0.6
616,234 - +0.6
616,234 - +0.4
616,279 - +0.5
616,314 + +1.0
616,324 - +1.2
616,336 + +1.4
616,429 + B158DRAFT_2443 0.21 -0.9
616,437 - B158DRAFT_2443 0.23 -0.7
616,492 + B158DRAFT_2443 0.35 +0.9
616,492 + B158DRAFT_2443 0.35 -0.8
616,492 + B158DRAFT_2443 0.35 -0.1
616,492 + B158DRAFT_2443 0.35 +0.1
616,500 - B158DRAFT_2443 0.37 +0.9
616,500 - B158DRAFT_2443 0.37 -2.1
616,502 + B158DRAFT_2443 0.37 +0.6
616,503 + B158DRAFT_2443 0.37 -1.6
616,534 - B158DRAFT_2443 0.44 +1.7
616,547 - B158DRAFT_2443 0.47 +0.8
616,557 + B158DRAFT_2443 0.49 +0.1
616,565 - B158DRAFT_2443 0.50 -1.9
616,565 - B158DRAFT_2443 0.50 +2.6
616,568 + B158DRAFT_2443 0.51 +2.0
616,576 - B158DRAFT_2443 0.53 -2.0
616,576 - B158DRAFT_2443 0.53 +0.1
616,576 - B158DRAFT_2443 0.53 +2.4
616,576 - B158DRAFT_2443 0.53 -0.8
616,641 + B158DRAFT_2443 0.67 +0.2
616,641 + B158DRAFT_2443 0.67 +0.6
616,649 - B158DRAFT_2443 0.68 +0.9
616,649 - B158DRAFT_2443 0.68 -1.2
616,657 - B158DRAFT_2443 0.70 -1.8
616,789 - -0.5
616,791 + +0.4
616,799 - -0.6
616,799 - -1.1
616,799 - +1.2
616,814 + -1.6
616,814 + -0.2
616,926 + +0.4
616,926 + -0.5
616,926 + +0.6
617,877 + +1.0
617,877 - +1.7
617,900 - +0.1
617,931 + +0.7
617,931 + -0.7
617,931 + +0.1
617,939 - +1.4
617,939 - -0.2
617,995 + B158DRAFT_2445 0.15 -0.2
617,998 - B158DRAFT_2445 0.15 +0.4
618,072 + B158DRAFT_2445 0.22 -2.1
618,091 + B158DRAFT_2445 0.24 +0.9
618,128 + B158DRAFT_2445 0.27 -0.8
618,138 + B158DRAFT_2445 0.28 -1.8
618,151 + B158DRAFT_2445 0.29 -0.6
618,239 + B158DRAFT_2445 0.37 -1.5
618,274 + B158DRAFT_2445 0.40 -1.5
618,324 + B158DRAFT_2445 0.45 -0.6
618,332 + B158DRAFT_2445 0.46 -0.7
618,332 + B158DRAFT_2445 0.46 -0.2
618,332 + B158DRAFT_2445 0.46 +0.2
618,332 + B158DRAFT_2445 0.46 -0.4
618,338 + B158DRAFT_2445 0.46 -0.2
618,340 - B158DRAFT_2445 0.47 +1.1
618,340 - B158DRAFT_2445 0.47 -1.0
618,340 - B158DRAFT_2445 0.47 -0.8
618,340 - B158DRAFT_2445 0.47 -1.0
618,374 + B158DRAFT_2445 0.50 -1.9
618,376 + B158DRAFT_2445 0.50 -1.1
618,396 + B158DRAFT_2445 0.52 +0.6
618,409 + +5.0
618,438 + B158DRAFT_2445 0.56 -1.0
618,479 + B158DRAFT_2445 0.59 -1.6
618,483 + B158DRAFT_2445 0.60 -1.9
618,506 - B158DRAFT_2445 0.62 -0.7
618,521 + B158DRAFT_2445 0.63 -0.5
618,549 + B158DRAFT_2445 0.66 +1.0
618,554 + B158DRAFT_2445 0.66 -1.0
618,557 - B158DRAFT_2445 0.67 +1.8
618,562 - B158DRAFT_2445 0.67 +1.5
618,645 - B158DRAFT_2445 0.75 +0.2
618,645 - B158DRAFT_2445 0.75 +0.7
618,645 - B158DRAFT_2445 0.75 +0.0
618,761 + B158DRAFT_2445 0.85 +0.8
618,813 + +0.5
618,813 + +0.8
618,822 - -0.9

Or see this region's nucleotide sequence