Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2430 and B158DRAFT_2431 overlap by 56 nucleotides B158DRAFT_2431 and B158DRAFT_2432 are separated by 39 nucleotides B158DRAFT_2432 and B158DRAFT_2433 are separated by 15 nucleotides
B158DRAFT_2430: B158DRAFT_2430 - tryptophan synthase, alpha chain (EC 4.2.1.20), at 603,644 to 604,549
_2430
B158DRAFT_2431: B158DRAFT_2431 - hypothetical protein, at 604,494 to 604,742
_2431
B158DRAFT_2432: B158DRAFT_2432 - 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19), at 604,782 to 606,086
_2432
B158DRAFT_2433: B158DRAFT_2433 - chorismate synthase (EC 4.2.3.5), at 606,102 to 607,199
_2433
Position (kb) 604
605
606
607 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7
8
9 at 604.091 kb on + strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.327 kb on - strand, within B158DRAFT_2430 at 604.657 kb on - strand, within B158DRAFT_2431 at 604.732 kb on + strand at 604.732 kb on - strand at 604.737 kb on + strand at 604.745 kb on - strand at 604.745 kb on - strand at 604.745 kb on - strand at 604.745 kb on - strand at 604.759 kb on - strand at 604.811 kb on + strand at 604.818 kb on - strand at 604.867 kb on - strand at 604.891 kb on + strand at 604.891 kb on + strand at 604.891 kb on + strand at 604.899 kb on - strand at 604.946 kb on + strand, within B158DRAFT_2432 at 604.983 kb on + strand, within B158DRAFT_2432 at 605.075 kb on + strand, within B158DRAFT_2432 at 605.075 kb on + strand, within B158DRAFT_2432 at 605.107 kb on - strand, within B158DRAFT_2432 at 605.107 kb on - strand, within B158DRAFT_2432 at 605.138 kb on - strand, within B158DRAFT_2432 at 605.142 kb on + strand, within B158DRAFT_2432 at 605.142 kb on + strand, within B158DRAFT_2432 at 605.150 kb on - strand, within B158DRAFT_2432 at 605.460 kb on + strand, within B158DRAFT_2432 at 605.689 kb on + strand, within B158DRAFT_2432 at 605.713 kb on - strand, within B158DRAFT_2432 at 605.732 kb on - strand, within B158DRAFT_2432 at 605.851 kb on - strand, within B158DRAFT_2432 at 605.910 kb on + strand, within B158DRAFT_2432 at 605.923 kb on - strand, within B158DRAFT_2432 at 606.037 kb on + strand at 606.059 kb on - strand at 606.123 kb on + strand at 606.167 kb on - strand at 606.188 kb on - strand at 606.193 kb on - strand at 606.199 kb on + strand at 606.227 kb on - strand, within B158DRAFT_2433 at 606.252 kb on + strand, within B158DRAFT_2433 at 606.252 kb on + strand, within B158DRAFT_2433 at 606.252 kb on + strand, within B158DRAFT_2433 at 606.252 kb on + strand, within B158DRAFT_2433 at 606.260 kb on - strand, within B158DRAFT_2433 at 606.260 kb on - strand, within B158DRAFT_2433 at 606.260 kb on - strand, within B158DRAFT_2433 at 606.260 kb on - strand, within B158DRAFT_2433 at 606.377 kb on - strand, within B158DRAFT_2433 at 606.385 kb on + strand, within B158DRAFT_2433 at 606.393 kb on - strand, within B158DRAFT_2433 at 606.393 kb on - strand, within B158DRAFT_2433 at 606.423 kb on + strand, within B158DRAFT_2433 at 606.461 kb on + strand, within B158DRAFT_2433 at 606.461 kb on + strand, within B158DRAFT_2433 at 606.469 kb on - strand, within B158DRAFT_2433 at 606.469 kb on - strand, within B158DRAFT_2433 at 606.471 kb on + strand, within B158DRAFT_2433 at 606.478 kb on + strand, within B158DRAFT_2433 at 606.491 kb on - strand, within B158DRAFT_2433 at 606.542 kb on + strand, within B158DRAFT_2433 at 606.592 kb on + strand, within B158DRAFT_2433 at 606.607 kb on - strand, within B158DRAFT_2433 at 606.633 kb on + strand, within B158DRAFT_2433 at 606.652 kb on + strand, within B158DRAFT_2433 at 606.727 kb on + strand, within B158DRAFT_2433 at 606.735 kb on - strand, within B158DRAFT_2433 at 606.735 kb on - strand, within B158DRAFT_2433 at 606.737 kb on + strand, within B158DRAFT_2433 at 606.771 kb on - strand, within B158DRAFT_2433 at 606.821 kb on + strand, within B158DRAFT_2433 at 606.918 kb on - strand, within B158DRAFT_2433
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 604,091 + B158DRAFT_2430 0.49 -1.0 604,161 - B158DRAFT_2430 0.57 +0.9 604,161 - B158DRAFT_2430 0.57 +0.4 604,161 - B158DRAFT_2430 0.57 +2.1 604,161 - B158DRAFT_2430 0.57 -1.6 604,327 - B158DRAFT_2430 0.75 +8.8 604,657 - B158DRAFT_2431 0.65 +3.6 604,732 + -0.5 604,732 - +2.4 604,737 + +0.2 604,745 - +6.0 604,745 - +3.6 604,745 - +2.4 604,745 - +6.0 604,759 - +3.6 604,811 + +3.9 604,818 - +4.9 604,867 - +4.2 604,891 + +4.9 604,891 + +4.3 604,891 + +1.4 604,899 - +4.0 604,946 + B158DRAFT_2432 0.13 +4.8 604,983 + B158DRAFT_2432 0.15 +3.7 605,075 + B158DRAFT_2432 0.22 +3.7 605,075 + B158DRAFT_2432 0.22 +4.3 605,107 - B158DRAFT_2432 0.25 +3.7 605,107 - B158DRAFT_2432 0.25 +3.0 605,138 - B158DRAFT_2432 0.27 +4.0 605,142 + B158DRAFT_2432 0.28 +4.0 605,142 + B158DRAFT_2432 0.28 +3.4 605,150 - B158DRAFT_2432 0.28 +4.6 605,460 + B158DRAFT_2432 0.52 +3.7 605,689 + B158DRAFT_2432 0.70 +2.4 605,713 - B158DRAFT_2432 0.71 +2.6 605,732 - B158DRAFT_2432 0.73 +4.0 605,851 - B158DRAFT_2432 0.82 +3.9 605,910 + B158DRAFT_2432 0.86 +3.8 605,923 - B158DRAFT_2432 0.87 +3.1 606,037 + +2.6 606,059 - +2.8 606,123 + +4.5 606,167 - +4.2 606,188 - +3.8 606,193 - +4.1 606,199 + +5.0 606,227 - B158DRAFT_2433 0.11 +3.4 606,252 + B158DRAFT_2433 0.14 +4.0 606,252 + B158DRAFT_2433 0.14 +4.4 606,252 + B158DRAFT_2433 0.14 +4.4 606,252 + B158DRAFT_2433 0.14 +4.4 606,260 - B158DRAFT_2433 0.14 +4.0 606,260 - B158DRAFT_2433 0.14 +3.8 606,260 - B158DRAFT_2433 0.14 +4.2 606,260 - B158DRAFT_2433 0.14 +4.0 606,377 - B158DRAFT_2433 0.25 +4.6 606,385 + B158DRAFT_2433 0.26 +5.1 606,393 - B158DRAFT_2433 0.27 +3.5 606,393 - B158DRAFT_2433 0.27 +4.1 606,423 + B158DRAFT_2433 0.29 +4.2 606,461 + B158DRAFT_2433 0.33 +3.9 606,461 + B158DRAFT_2433 0.33 +4.7 606,469 - B158DRAFT_2433 0.33 +4.5 606,469 - B158DRAFT_2433 0.33 +5.0 606,471 + B158DRAFT_2433 0.34 +3.7 606,478 + B158DRAFT_2433 0.34 +3.4 606,491 - B158DRAFT_2433 0.35 +4.4 606,542 + B158DRAFT_2433 0.40 +3.5 606,592 + B158DRAFT_2433 0.45 +4.4 606,607 - B158DRAFT_2433 0.46 +4.6 606,633 + B158DRAFT_2433 0.48 +4.0 606,652 + B158DRAFT_2433 0.50 +4.4 606,727 + B158DRAFT_2433 0.57 +4.4 606,735 - B158DRAFT_2433 0.58 +4.3 606,735 - B158DRAFT_2433 0.58 +4.5 606,737 + B158DRAFT_2433 0.58 +2.2 606,771 - B158DRAFT_2433 0.61 +4.0 606,821 + B158DRAFT_2433 0.65 +3.8 606,918 - B158DRAFT_2433 0.74 +4.4
Or see this region's nucleotide sequence