Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2287

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2285 and B158DRAFT_2287 are separated by 832 nucleotidesB158DRAFT_2287 and B158DRAFT_2288 are separated by 23 nucleotides B158DRAFT_2285: B158DRAFT_2285 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 450,437 to 451,138 _2285 B158DRAFT_2287: B158DRAFT_2287 - ATP phosphoribosyltransferase, at 451,971 to 452,819 _2287 B158DRAFT_2288: B158DRAFT_2288 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 452,843 to 454,540 _2288 Position (kb) 451 452 453Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 451.156 kb on - strandat 451.158 kb on + strandat 451.166 kb on - strandat 451.166 kb on - strandat 451.166 kb on - strandat 451.178 kb on - strandat 451.318 kb on - strandat 451.318 kb on - strandat 451.346 kb on - strandat 451.409 kb on + strandat 451.431 kb on + strandat 451.470 kb on + strandat 451.475 kb on + strandat 451.478 kb on - strandat 451.478 kb on - strandat 451.490 kb on + strandat 451.496 kb on + strandat 451.498 kb on - strandat 451.576 kb on + strandat 451.591 kb on + strandat 451.599 kb on - strandat 451.599 kb on - strandat 451.806 kb on + strandat 451.806 kb on + strandat 451.806 kb on + strandat 451.842 kb on - strandat 451.842 kb on - strandat 451.888 kb on + strandat 451.912 kb on - strandat 452.082 kb on + strand, within B158DRAFT_2287at 452.118 kb on + strand, within B158DRAFT_2287at 452.118 kb on + strand, within B158DRAFT_2287at 452.166 kb on - strand, within B158DRAFT_2287at 452.203 kb on + strand, within B158DRAFT_2287at 452.211 kb on - strand, within B158DRAFT_2287at 452.228 kb on + strand, within B158DRAFT_2287at 452.259 kb on + strand, within B158DRAFT_2287at 452.259 kb on + strand, within B158DRAFT_2287at 452.259 kb on + strand, within B158DRAFT_2287at 452.289 kb on - strand, within B158DRAFT_2287at 452.369 kb on + strand, within B158DRAFT_2287at 452.536 kb on - strand, within B158DRAFT_2287at 452.583 kb on + strand, within B158DRAFT_2287at 452.583 kb on + strand, within B158DRAFT_2287at 452.583 kb on + strand, within B158DRAFT_2287at 452.585 kb on + strand, within B158DRAFT_2287at 452.591 kb on - strand, within B158DRAFT_2287at 452.592 kb on - strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.631 kb on - strand, within B158DRAFT_2287at 452.631 kb on - strand, within B158DRAFT_2287at 452.646 kb on + strand, within B158DRAFT_2287at 452.700 kb on + strand, within B158DRAFT_2287at 452.832 kb on + strandat 452.832 kb on + strandat 452.832 kb on + strandat 452.832 kb on + strandat 452.883 kb on + strandat 452.916 kb on + strandat 452.916 kb on + strandat 452.947 kb on - strandat 452.953 kb on + strandat 452.953 kb on + strandat 452.958 kb on + strandat 452.958 kb on + strandat 452.958 kb on + strandat 452.962 kb on + strandat 452.966 kb on - strandat 453.018 kb on + strand, within B158DRAFT_2288at 453.075 kb on + strand, within B158DRAFT_2288at 453.075 kb on + strand, within B158DRAFT_2288at 453.083 kb on - strand, within B158DRAFT_2288at 453.083 kb on - strand, within B158DRAFT_2288at 453.132 kb on + strand, within B158DRAFT_2288at 453.140 kb on - strand, within B158DRAFT_2288at 453.168 kb on - strand, within B158DRAFT_2288at 453.205 kb on + strand, within B158DRAFT_2288at 453.250 kb on + strand, within B158DRAFT_2288at 453.262 kb on - strand, within B158DRAFT_2288at 453.276 kb on + strand, within B158DRAFT_2288at 453.286 kb on + strand, within B158DRAFT_2288at 453.294 kb on - strand, within B158DRAFT_2288at 453.294 kb on - strand, within B158DRAFT_2288at 453.374 kb on - strand, within B158DRAFT_2288at 453.406 kb on + strand, within B158DRAFT_2288at 453.406 kb on + strand, within B158DRAFT_2288at 453.415 kb on + strand, within B158DRAFT_2288at 453.415 kb on + strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.435 kb on - strand, within B158DRAFT_2288at 453.467 kb on - strand, within B158DRAFT_2288at 453.487 kb on + strand, within B158DRAFT_2288at 453.572 kb on - strand, within B158DRAFT_2288at 453.779 kb on - strand, within B158DRAFT_2288at 453.790 kb on + strand, within B158DRAFT_2288at 453.790 kb on + strand, within B158DRAFT_2288at 453.798 kb on - strand, within B158DRAFT_2288at 453.803 kb on - strand, within B158DRAFT_2288

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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451,156 - +0.1
451,158 + +0.3
451,166 - +1.4
451,166 - +0.0
451,166 - -0.6
451,178 - +1.4
451,318 - +1.2
451,318 - -1.0
451,346 - -1.3
451,409 + -0.9
451,431 + +3.1
451,470 + +0.1
451,475 + -0.3
451,478 - -2.1
451,478 - -0.4
451,490 + -0.8
451,496 + +0.5
451,498 - +0.2
451,576 + -0.1
451,591 + -0.8
451,599 - -0.4
451,599 - +1.3
451,806 + -0.8
451,806 + -1.0
451,806 + -1.1
451,842 - +3.2
451,842 - -1.2
451,888 + -1.7
451,912 - -2.7
452,082 + B158DRAFT_2287 0.13 +0.1
452,118 + B158DRAFT_2287 0.17 -0.5
452,118 + B158DRAFT_2287 0.17 -0.4
452,166 - B158DRAFT_2287 0.23 +5.1
452,203 + B158DRAFT_2287 0.27 -0.8
452,211 - B158DRAFT_2287 0.28 +1.2
452,228 + B158DRAFT_2287 0.30 +0.0
452,259 + B158DRAFT_2287 0.34 +0.3
452,259 + B158DRAFT_2287 0.34 +1.2
452,259 + B158DRAFT_2287 0.34 -0.5
452,289 - B158DRAFT_2287 0.37 -1.1
452,369 + B158DRAFT_2287 0.47 -0.6
452,536 - B158DRAFT_2287 0.67 -0.4
452,583 + B158DRAFT_2287 0.72 +0.7
452,583 + B158DRAFT_2287 0.72 -0.5
452,583 + B158DRAFT_2287 0.72 +0.3
452,585 + B158DRAFT_2287 0.72 +1.8
452,591 - B158DRAFT_2287 0.73 -0.8
452,592 - B158DRAFT_2287 0.73 -1.6
452,623 + B158DRAFT_2287 0.77 -1.6
452,623 + B158DRAFT_2287 0.77 -1.2
452,623 + B158DRAFT_2287 0.77 -1.9
452,623 + B158DRAFT_2287 0.77 +0.1
452,623 + B158DRAFT_2287 0.77 -2.5
452,623 + B158DRAFT_2287 0.77 +0.0
452,631 - B158DRAFT_2287 0.78 +0.5
452,631 - B158DRAFT_2287 0.78 -1.5
452,646 + B158DRAFT_2287 0.80 -0.8
452,700 + B158DRAFT_2287 0.86 -1.9
452,832 + +0.2
452,832 + -1.3
452,832 + +0.1
452,832 + +0.2
452,883 + +0.6
452,916 + +2.8
452,916 + -0.7
452,947 - +1.4
452,953 + -0.4
452,953 + +0.9
452,958 + -1.0
452,958 + -0.6
452,958 + -0.2
452,962 + -1.6
452,966 - -1.8
453,018 + B158DRAFT_2288 0.10 +2.2
453,075 + B158DRAFT_2288 0.14 -1.5
453,075 + B158DRAFT_2288 0.14 -2.1
453,083 - B158DRAFT_2288 0.14 -0.5
453,083 - B158DRAFT_2288 0.14 -0.2
453,132 + B158DRAFT_2288 0.17 -1.4
453,140 - B158DRAFT_2288 0.17 -0.1
453,168 - B158DRAFT_2288 0.19 -0.0
453,205 + B158DRAFT_2288 0.21 -0.7
453,250 + B158DRAFT_2288 0.24 -0.9
453,262 - B158DRAFT_2288 0.25 -0.6
453,276 + B158DRAFT_2288 0.26 -0.1
453,286 + B158DRAFT_2288 0.26 +0.2
453,294 - B158DRAFT_2288 0.27 +0.6
453,294 - B158DRAFT_2288 0.27 +0.4
453,374 - B158DRAFT_2288 0.31 -0.5
453,406 + B158DRAFT_2288 0.33 -1.0
453,406 + B158DRAFT_2288 0.33 -1.3
453,415 + B158DRAFT_2288 0.34 +0.2
453,415 + B158DRAFT_2288 0.34 -1.0
453,423 - B158DRAFT_2288 0.34 -1.8
453,423 - B158DRAFT_2288 0.34 +1.1
453,423 - B158DRAFT_2288 0.34 -0.2
453,423 - B158DRAFT_2288 0.34 -1.2
453,423 - B158DRAFT_2288 0.34 -1.6
453,435 - B158DRAFT_2288 0.35 -0.6
453,467 - B158DRAFT_2288 0.37 -0.8
453,487 + B158DRAFT_2288 0.38 +1.0
453,572 - B158DRAFT_2288 0.43 -1.0
453,779 - B158DRAFT_2288 0.55 -1.4
453,790 + B158DRAFT_2288 0.56 -0.1
453,790 + B158DRAFT_2288 0.56 +1.5
453,798 - B158DRAFT_2288 0.56 -1.4
453,803 - B158DRAFT_2288 0.57 -0.2

Or see this region's nucleotide sequence