Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2243

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2242 and B158DRAFT_2243 are separated by 52 nucleotidesB158DRAFT_2243 and B158DRAFT_2244 are separated by 167 nucleotides B158DRAFT_2242: B158DRAFT_2242 - Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB, at 401,276 to 403,039 _2242 B158DRAFT_2243: B158DRAFT_2243 - Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein, at 403,092 to 404,609 _2243 B158DRAFT_2244: B158DRAFT_2244 - phosphoribosylformylglycinamidine synthase, single chain form, at 404,777 to 408,673 _2244 Position (kb) 403 404 405Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 402.094 kb on - strand, within B158DRAFT_2242at 402.230 kb on - strand, within B158DRAFT_2242at 402.300 kb on - strand, within B158DRAFT_2242at 402.321 kb on + strand, within B158DRAFT_2242at 402.328 kb on + strand, within B158DRAFT_2242at 402.329 kb on - strand, within B158DRAFT_2242at 402.339 kb on + strand, within B158DRAFT_2242at 402.339 kb on - strand, within B158DRAFT_2242at 402.339 kb on - strand, within B158DRAFT_2242at 402.347 kb on + strand, within B158DRAFT_2242at 402.347 kb on - strand, within B158DRAFT_2242at 402.347 kb on - strand, within B158DRAFT_2242at 402.357 kb on - strand, within B158DRAFT_2242at 402.365 kb on - strand, within B158DRAFT_2242at 402.378 kb on - strand, within B158DRAFT_2242at 402.463 kb on + strand, within B158DRAFT_2242at 402.463 kb on + strand, within B158DRAFT_2242at 402.470 kb on + strand, within B158DRAFT_2242at 402.471 kb on - strand, within B158DRAFT_2242at 402.538 kb on - strand, within B158DRAFT_2242at 402.546 kb on + strand, within B158DRAFT_2242at 402.551 kb on + strand, within B158DRAFT_2242at 402.559 kb on - strand, within B158DRAFT_2242at 402.559 kb on - strand, within B158DRAFT_2242at 402.559 kb on - strand, within B158DRAFT_2242at 402.605 kb on + strand, within B158DRAFT_2242at 402.617 kb on - strand, within B158DRAFT_2242at 402.721 kb on - strand, within B158DRAFT_2242at 402.930 kb on + strandat 402.930 kb on + strandat 402.938 kb on - strandat 402.938 kb on - strandat 402.941 kb on + strandat 402.986 kb on + strandat 403.007 kb on + strandat 403.022 kb on + strandat 403.056 kb on + strandat 403.145 kb on + strandat 403.175 kb on + strandat 403.184 kb on + strandat 403.191 kb on + strandat 403.199 kb on - strandat 403.199 kb on - strandat 403.222 kb on + strandat 403.222 kb on + strandat 403.224 kb on - strandat 403.232 kb on + strandat 403.240 kb on - strandat 403.240 kb on - strandat 403.246 kb on + strand, within B158DRAFT_2243at 403.254 kb on - strand, within B158DRAFT_2243at 403.254 kb on - strand, within B158DRAFT_2243at 403.282 kb on - strand, within B158DRAFT_2243at 403.339 kb on - strand, within B158DRAFT_2243at 403.408 kb on + strand, within B158DRAFT_2243at 403.416 kb on - strand, within B158DRAFT_2243at 403.433 kb on + strand, within B158DRAFT_2243at 403.452 kb on - strand, within B158DRAFT_2243at 403.481 kb on + strand, within B158DRAFT_2243at 403.481 kb on + strand, within B158DRAFT_2243at 403.481 kb on + strand, within B158DRAFT_2243at 403.489 kb on - strand, within B158DRAFT_2243at 403.489 kb on - strand, within B158DRAFT_2243at 403.505 kb on - strand, within B158DRAFT_2243at 403.612 kb on + strand, within B158DRAFT_2243at 403.619 kb on + strand, within B158DRAFT_2243at 403.620 kb on - strand, within B158DRAFT_2243at 403.628 kb on + strand, within B158DRAFT_2243at 403.628 kb on + strand, within B158DRAFT_2243at 403.636 kb on - strand, within B158DRAFT_2243at 403.689 kb on + strand, within B158DRAFT_2243at 403.689 kb on + strand, within B158DRAFT_2243at 403.697 kb on - strand, within B158DRAFT_2243at 403.713 kb on + strand, within B158DRAFT_2243at 403.721 kb on - strand, within B158DRAFT_2243at 403.721 kb on - strand, within B158DRAFT_2243at 403.848 kb on + strand, within B158DRAFT_2243at 403.918 kb on + strand, within B158DRAFT_2243at 403.929 kb on + strand, within B158DRAFT_2243at 403.930 kb on + strand, within B158DRAFT_2243at 403.937 kb on - strand, within B158DRAFT_2243at 403.937 kb on - strand, within B158DRAFT_2243at 403.937 kb on - strand, within B158DRAFT_2243at 403.943 kb on - strand, within B158DRAFT_2243at 403.943 kb on - strand, within B158DRAFT_2243at 403.956 kb on - strand, within B158DRAFT_2243at 403.976 kb on + strand, within B158DRAFT_2243at 403.984 kb on - strand, within B158DRAFT_2243at 404.018 kb on + strand, within B158DRAFT_2243at 404.026 kb on - strand, within B158DRAFT_2243at 404.051 kb on - strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.064 kb on + strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.072 kb on - strand, within B158DRAFT_2243at 404.095 kb on - strand, within B158DRAFT_2243at 404.105 kb on - strand, within B158DRAFT_2243at 404.132 kb on + strand, within B158DRAFT_2243at 404.282 kb on + strand, within B158DRAFT_2243at 404.288 kb on + strand, within B158DRAFT_2243at 404.288 kb on + strand, within B158DRAFT_2243at 404.289 kb on + strand, within B158DRAFT_2243at 404.381 kb on + strand, within B158DRAFT_2243at 404.381 kb on + strand, within B158DRAFT_2243at 404.389 kb on - strand, within B158DRAFT_2243at 404.436 kb on - strand, within B158DRAFT_2243at 404.450 kb on + strand, within B158DRAFT_2243at 404.536 kb on - strandat 404.536 kb on - strandat 404.578 kb on - strandat 404.644 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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402,094 - B158DRAFT_2242 0.46 -1.2
402,230 - B158DRAFT_2242 0.54 +3.3
402,300 - B158DRAFT_2242 0.58 -2.5
402,321 + B158DRAFT_2242 0.59 -2.5
402,328 + B158DRAFT_2242 0.60 +0.1
402,329 - B158DRAFT_2242 0.60 +0.2
402,339 + B158DRAFT_2242 0.60 +0.4
402,339 - B158DRAFT_2242 0.60 -0.7
402,339 - B158DRAFT_2242 0.60 -0.3
402,347 + B158DRAFT_2242 0.61 +0.8
402,347 - B158DRAFT_2242 0.61 +0.1
402,347 - B158DRAFT_2242 0.61 -1.1
402,357 - B158DRAFT_2242 0.61 +0.3
402,365 - B158DRAFT_2242 0.62 -0.6
402,378 - B158DRAFT_2242 0.62 -0.8
402,463 + B158DRAFT_2242 0.67 -1.1
402,463 + B158DRAFT_2242 0.67 +0.1
402,470 + B158DRAFT_2242 0.68 -0.1
402,471 - B158DRAFT_2242 0.68 +0.9
402,538 - B158DRAFT_2242 0.72 -1.6
402,546 + B158DRAFT_2242 0.72 +0.8
402,551 + B158DRAFT_2242 0.72 -1.1
402,559 - B158DRAFT_2242 0.73 -0.4
402,559 - B158DRAFT_2242 0.73 -1.8
402,559 - B158DRAFT_2242 0.73 +1.1
402,605 + B158DRAFT_2242 0.75 +0.9
402,617 - B158DRAFT_2242 0.76 +1.2
402,721 - B158DRAFT_2242 0.82 -0.7
402,930 + +0.1
402,930 + +1.5
402,938 - -0.9
402,938 - -1.1
402,941 + -1.5
402,986 + -1.2
403,007 + -0.9
403,022 + -1.5
403,056 + -0.3
403,145 + -0.2
403,175 + -0.8
403,184 + +1.1
403,191 + -0.8
403,199 - +2.6
403,199 - +0.4
403,222 + -1.7
403,222 + -2.0
403,224 - +2.1
403,232 + -0.8
403,240 - -0.7
403,240 - -2.2
403,246 + B158DRAFT_2243 0.10 -2.3
403,254 - B158DRAFT_2243 0.11 -2.0
403,254 - B158DRAFT_2243 0.11 -1.5
403,282 - B158DRAFT_2243 0.13 +0.0
403,339 - B158DRAFT_2243 0.16 +3.1
403,408 + B158DRAFT_2243 0.21 +3.1
403,416 - B158DRAFT_2243 0.21 +1.3
403,433 + B158DRAFT_2243 0.22 +0.9
403,452 - B158DRAFT_2243 0.24 +0.4
403,481 + B158DRAFT_2243 0.26 +1.8
403,481 + B158DRAFT_2243 0.26 +2.1
403,481 + B158DRAFT_2243 0.26 +2.1
403,489 - B158DRAFT_2243 0.26 +2.1
403,489 - B158DRAFT_2243 0.26 +3.1
403,505 - B158DRAFT_2243 0.27 +1.4
403,612 + B158DRAFT_2243 0.34 +0.2
403,619 + B158DRAFT_2243 0.35 +1.5
403,620 - B158DRAFT_2243 0.35 +2.1
403,628 + B158DRAFT_2243 0.35 +2.5
403,628 + B158DRAFT_2243 0.35 +2.5
403,636 - B158DRAFT_2243 0.36 +2.1
403,689 + B158DRAFT_2243 0.39 +1.8
403,689 + B158DRAFT_2243 0.39 +2.1
403,697 - B158DRAFT_2243 0.40 +2.5
403,713 + B158DRAFT_2243 0.41 +1.8
403,721 - B158DRAFT_2243 0.41 -0.4
403,721 - B158DRAFT_2243 0.41 +0.5
403,848 + B158DRAFT_2243 0.50 +0.5
403,918 + B158DRAFT_2243 0.54 +4.1
403,929 + B158DRAFT_2243 0.55 +2.1
403,930 + B158DRAFT_2243 0.55 +0.8
403,937 - B158DRAFT_2243 0.56 +2.5
403,937 - B158DRAFT_2243 0.56 +1.1
403,937 - B158DRAFT_2243 0.56 +2.5
403,943 - B158DRAFT_2243 0.56 +4.1
403,943 - B158DRAFT_2243 0.56 +3.1
403,956 - B158DRAFT_2243 0.57 +2.5
403,976 + B158DRAFT_2243 0.58 +0.4
403,984 - B158DRAFT_2243 0.59 +0.9
404,018 + B158DRAFT_2243 0.61 +0.3
404,026 - B158DRAFT_2243 0.62 +2.5
404,051 - B158DRAFT_2243 0.63 +4.1
404,064 + B158DRAFT_2243 0.64 +4.1
404,064 + B158DRAFT_2243 0.64 +0.8
404,064 + B158DRAFT_2243 0.64 +2.1
404,064 + B158DRAFT_2243 0.64 -0.1
404,064 + B158DRAFT_2243 0.64 -1.2
404,064 + B158DRAFT_2243 0.64 +3.1
404,064 + B158DRAFT_2243 0.64 +2.5
404,064 + B158DRAFT_2243 0.64 +3.1
404,064 + B158DRAFT_2243 0.64 +0.1
404,064 + B158DRAFT_2243 0.64 +2.1
404,072 - B158DRAFT_2243 0.65 +0.9
404,072 - B158DRAFT_2243 0.65 +1.1
404,072 - B158DRAFT_2243 0.65 +1.8
404,072 - B158DRAFT_2243 0.65 -1.8
404,072 - B158DRAFT_2243 0.65 +1.1
404,072 - B158DRAFT_2243 0.65 +1.8
404,072 - B158DRAFT_2243 0.65 +2.5
404,072 - B158DRAFT_2243 0.65 -1.4
404,072 - B158DRAFT_2243 0.65 -0.6
404,072 - B158DRAFT_2243 0.65 +0.1
404,072 - B158DRAFT_2243 0.65 +3.1
404,072 - B158DRAFT_2243 0.65 +1.8
404,072 - B158DRAFT_2243 0.65 +3.1
404,072 - B158DRAFT_2243 0.65 -0.5
404,072 - B158DRAFT_2243 0.65 +4.1
404,095 - B158DRAFT_2243 0.66 +4.1
404,105 - B158DRAFT_2243 0.67 +0.5
404,132 + B158DRAFT_2243 0.69 +2.1
404,282 + B158DRAFT_2243 0.78 +2.5
404,288 + B158DRAFT_2243 0.79 +2.1
404,288 + B158DRAFT_2243 0.79 +4.1
404,289 + B158DRAFT_2243 0.79 +2.5
404,381 + B158DRAFT_2243 0.85 +3.1
404,381 + B158DRAFT_2243 0.85 +0.7
404,389 - B158DRAFT_2243 0.85 +2.1
404,436 - B158DRAFT_2243 0.89 +1.8
404,450 + B158DRAFT_2243 0.89 +2.1
404,536 - +0.7
404,536 - +0.9
404,578 - +0.8
404,644 + +0.0

Or see this region's nucleotide sequence