Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2228 and B158DRAFT_2229 are separated by 70 nucleotides B158DRAFT_2229 and B158DRAFT_2230 are separated by 98 nucleotides B158DRAFT_2230 and B158DRAFT_2231 are separated by 133 nucleotides
B158DRAFT_2228: B158DRAFT_2228 - dihydroorotate oxidase A (EC 1.3.3.1), at 380,372 to 381,400
_2228
B158DRAFT_2229: B158DRAFT_2229 - 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52), at 381,471 to 383,627
_2229
B158DRAFT_2230: B158DRAFT_2230 - hypothetical protein, at 383,726 to 384,424
_2230
B158DRAFT_2231: B158DRAFT_2231 - Glutaredoxin-like domain (DUF836)., at 384,558 to 384,824
_2231
Position (kb) 381
382
383
384 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 381.499 kb on - strand at 381.522 kb on + strand at 381.530 kb on - strand at 381.613 kb on - strand at 381.686 kb on - strand at 381.708 kb on - strand, within B158DRAFT_2229 at 381.790 kb on + strand, within B158DRAFT_2229 at 381.911 kb on + strand, within B158DRAFT_2229 at 381.919 kb on - strand, within B158DRAFT_2229 at 381.921 kb on + strand, within B158DRAFT_2229 at 381.930 kb on - strand, within B158DRAFT_2229 at 381.943 kb on + strand, within B158DRAFT_2229 at 381.943 kb on + strand, within B158DRAFT_2229 at 381.951 kb on - strand, within B158DRAFT_2229 at 381.951 kb on - strand, within B158DRAFT_2229 at 381.958 kb on + strand, within B158DRAFT_2229 at 381.970 kb on + strand, within B158DRAFT_2229 at 381.970 kb on + strand, within B158DRAFT_2229 at 382.011 kb on + strand, within B158DRAFT_2229 at 382.016 kb on + strand, within B158DRAFT_2229 at 382.016 kb on - strand, within B158DRAFT_2229 at 382.047 kb on + strand, within B158DRAFT_2229 at 382.049 kb on + strand, within B158DRAFT_2229 at 382.057 kb on - strand, within B158DRAFT_2229 at 382.131 kb on + strand, within B158DRAFT_2229 at 382.131 kb on + strand, within B158DRAFT_2229 at 382.282 kb on + strand, within B158DRAFT_2229 at 382.374 kb on - strand, within B158DRAFT_2229 at 382.384 kb on + strand, within B158DRAFT_2229 at 382.489 kb on + strand, within B158DRAFT_2229 at 382.545 kb on + strand, within B158DRAFT_2229 at 382.555 kb on + strand, within B158DRAFT_2229 at 382.555 kb on + strand, within B158DRAFT_2229 at 382.563 kb on - strand, within B158DRAFT_2229 at 382.693 kb on + strand, within B158DRAFT_2229 at 382.791 kb on - strand, within B158DRAFT_2229 at 382.791 kb on - strand, within B158DRAFT_2229 at 382.965 kb on - strand, within B158DRAFT_2229 at 382.965 kb on - strand, within B158DRAFT_2229 at 382.970 kb on + strand, within B158DRAFT_2229 at 382.990 kb on + strand, within B158DRAFT_2229 at 383.008 kb on - strand, within B158DRAFT_2229 at 383.038 kb on + strand, within B158DRAFT_2229 at 383.074 kb on + strand, within B158DRAFT_2229 at 383.082 kb on - strand, within B158DRAFT_2229 at 383.087 kb on - strand, within B158DRAFT_2229 at 383.134 kb on - strand, within B158DRAFT_2229 at 383.159 kb on - strand, within B158DRAFT_2229 at 383.242 kb on + strand, within B158DRAFT_2229 at 383.317 kb on + strand, within B158DRAFT_2229 at 383.317 kb on + strand, within B158DRAFT_2229 at 383.317 kb on + strand, within B158DRAFT_2229 at 383.325 kb on - strand, within B158DRAFT_2229 at 383.325 kb on - strand, within B158DRAFT_2229 at 383.325 kb on - strand, within B158DRAFT_2229 at 383.334 kb on + strand, within B158DRAFT_2229 at 383.341 kb on + strand, within B158DRAFT_2229 at 383.342 kb on - strand, within B158DRAFT_2229 at 383.342 kb on - strand, within B158DRAFT_2229 at 383.344 kb on + strand, within B158DRAFT_2229 at 383.375 kb on - strand, within B158DRAFT_2229 at 383.397 kb on + strand, within B158DRAFT_2229 at 383.412 kb on - strand at 383.412 kb on - strand at 383.421 kb on + strand at 383.454 kb on + strand at 383.605 kb on + strand at 383.613 kb on - strand at 383.652 kb on + strand at 383.907 kb on + strand, within B158DRAFT_2230 at 384.178 kb on - strand, within B158DRAFT_2230 at 384.201 kb on + strand, within B158DRAFT_2230 at 384.201 kb on + strand, within B158DRAFT_2230 at 384.209 kb on - strand, within B158DRAFT_2230 at 384.209 kb on - strand, within B158DRAFT_2230 at 384.209 kb on - strand, within B158DRAFT_2230
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 381,499 - -0.6 381,522 + -0.6 381,530 - +2.1 381,613 - -1.4 381,686 - -0.0 381,708 - B158DRAFT_2229 0.11 +4.3 381,790 + B158DRAFT_2229 0.15 +0.8 381,911 + B158DRAFT_2229 0.20 -0.8 381,919 - B158DRAFT_2229 0.21 -0.2 381,921 + B158DRAFT_2229 0.21 -1.2 381,930 - B158DRAFT_2229 0.21 +0.5 381,943 + B158DRAFT_2229 0.22 -0.5 381,943 + B158DRAFT_2229 0.22 -1.1 381,951 - B158DRAFT_2229 0.22 -1.0 381,951 - B158DRAFT_2229 0.22 -0.6 381,958 + B158DRAFT_2229 0.23 +0.0 381,970 + B158DRAFT_2229 0.23 -0.8 381,970 + B158DRAFT_2229 0.23 +2.1 382,011 + B158DRAFT_2229 0.25 -0.6 382,016 + B158DRAFT_2229 0.25 -0.2 382,016 - B158DRAFT_2229 0.25 -0.0 382,047 + B158DRAFT_2229 0.27 -1.2 382,049 + B158DRAFT_2229 0.27 -1.1 382,057 - B158DRAFT_2229 0.27 +0.6 382,131 + B158DRAFT_2229 0.31 -0.9 382,131 + B158DRAFT_2229 0.31 +0.0 382,282 + B158DRAFT_2229 0.38 +0.5 382,374 - B158DRAFT_2229 0.42 +0.6 382,384 + B158DRAFT_2229 0.42 -1.1 382,489 + B158DRAFT_2229 0.47 +2.1 382,545 + B158DRAFT_2229 0.50 -0.1 382,555 + B158DRAFT_2229 0.50 -0.9 382,555 + B158DRAFT_2229 0.50 -0.5 382,563 - B158DRAFT_2229 0.51 -0.4 382,693 + B158DRAFT_2229 0.57 +0.3 382,791 - B158DRAFT_2229 0.61 -0.4 382,791 - B158DRAFT_2229 0.61 -1.2 382,965 - B158DRAFT_2229 0.69 -1.1 382,965 - B158DRAFT_2229 0.69 -0.4 382,970 + B158DRAFT_2229 0.69 +0.4 382,990 + B158DRAFT_2229 0.70 -1.2 383,008 - B158DRAFT_2229 0.71 +2.6 383,038 + B158DRAFT_2229 0.73 -0.8 383,074 + B158DRAFT_2229 0.74 -0.9 383,082 - B158DRAFT_2229 0.75 -2.2 383,087 - B158DRAFT_2229 0.75 -1.9 383,134 - B158DRAFT_2229 0.77 -2.0 383,159 - B158DRAFT_2229 0.78 -0.5 383,242 + B158DRAFT_2229 0.82 -0.8 383,317 + B158DRAFT_2229 0.86 +0.1 383,317 + B158DRAFT_2229 0.86 +0.4 383,317 + B158DRAFT_2229 0.86 -2.1 383,325 - B158DRAFT_2229 0.86 -0.2 383,325 - B158DRAFT_2229 0.86 -0.3 383,325 - B158DRAFT_2229 0.86 +0.5 383,334 + B158DRAFT_2229 0.86 -0.7 383,341 + B158DRAFT_2229 0.87 -2.8 383,342 - B158DRAFT_2229 0.87 +1.1 383,342 - B158DRAFT_2229 0.87 +1.2 383,344 + B158DRAFT_2229 0.87 +4.1 383,375 - B158DRAFT_2229 0.88 -0.3 383,397 + B158DRAFT_2229 0.89 +1.8 383,412 - +2.5 383,412 - -0.3 383,421 + -0.7 383,454 + -1.4 383,605 + -0.5 383,613 - -0.6 383,652 + -2.7 383,907 + B158DRAFT_2230 0.26 +0.3 384,178 - B158DRAFT_2230 0.65 +0.3 384,201 + B158DRAFT_2230 0.68 +0.1 384,201 + B158DRAFT_2230 0.68 -0.0 384,209 - B158DRAFT_2230 0.69 +1.7 384,209 - B158DRAFT_2230 0.69 -0.3 384,209 - B158DRAFT_2230 0.69 -2.4
Or see this region's nucleotide sequence