Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2005 and B158DRAFT_2006 are separated by 23 nucleotides B158DRAFT_2006 and B158DRAFT_2007 are separated by 50 nucleotides B158DRAFT_2007 and B158DRAFT_2008 overlap by 4 nucleotides B158DRAFT_2008 and B158DRAFT_2009 are separated by 15 nucleotides B158DRAFT_2009 and B158DRAFT_2010 are separated by 130 nucleotides
B158DRAFT_2005: B158DRAFT_2005 - hypothetical protein, at 138,250 to 139,080
_2005
B158DRAFT_2006: B158DRAFT_2006 - Uncharacterized conserved protein, at 139,104 to 139,502
_2006
B158DRAFT_2007: B158DRAFT_2007 - hypothetical protein, at 139,553 to 139,975
_2007
B158DRAFT_2008: B158DRAFT_2008 - Uncharacterized protein conserved in bacteria, at 139,972 to 140,370
_2008
B158DRAFT_2009: B158DRAFT_2009 - hypothetical protein, at 140,386 to 140,640
_2009
B158DRAFT_2010: B158DRAFT_2010 - hypothetical protein, at 140,771 to 141,127
_2010
Position (kb)
139
140 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.597 kb on - strand, within B158DRAFT_2005 at 138.615 kb on - strand, within B158DRAFT_2005 at 138.629 kb on + strand, within B158DRAFT_2005 at 138.629 kb on + strand, within B158DRAFT_2005 at 138.637 kb on - strand, within B158DRAFT_2005 at 138.724 kb on + strand, within B158DRAFT_2005 at 138.724 kb on + strand, within B158DRAFT_2005 at 138.807 kb on + strand, within B158DRAFT_2005 at 138.807 kb on + strand, within B158DRAFT_2005 at 138.815 kb on - strand, within B158DRAFT_2005 at 138.815 kb on - strand, within B158DRAFT_2005 at 138.826 kb on + strand, within B158DRAFT_2005 at 138.838 kb on + strand, within B158DRAFT_2005 at 138.953 kb on + strand, within B158DRAFT_2005 at 138.953 kb on + strand, within B158DRAFT_2005 at 138.958 kb on + strand, within B158DRAFT_2005 at 138.958 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.978 kb on + strand, within B158DRAFT_2005 at 138.986 kb on - strand, within B158DRAFT_2005 at 138.986 kb on - strand, within B158DRAFT_2005 at 139.040 kb on + strand at 139.168 kb on + strand, within B158DRAFT_2006 at 139.207 kb on - strand, within B158DRAFT_2006 at 139.215 kb on + strand, within B158DRAFT_2006 at 139.223 kb on - strand, within B158DRAFT_2006 at 139.257 kb on + strand, within B158DRAFT_2006 at 139.350 kb on + strand, within B158DRAFT_2006 at 139.350 kb on + strand, within B158DRAFT_2006 at 139.358 kb on - strand, within B158DRAFT_2006 at 139.374 kb on + strand, within B158DRAFT_2006 at 139.384 kb on - strand, within B158DRAFT_2006 at 139.384 kb on - strand, within B158DRAFT_2006 at 139.661 kb on + strand, within B158DRAFT_2007 at 139.673 kb on + strand, within B158DRAFT_2007 at 139.673 kb on + strand, within B158DRAFT_2007 at 139.673 kb on + strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.691 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.753 kb on - strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.835 kb on - strand, within B158DRAFT_2007 at 139.835 kb on - strand, within B158DRAFT_2007 at 139.884 kb on + strand, within B158DRAFT_2007 at 139.884 kb on + strand, within B158DRAFT_2007 at 139.892 kb on - strand, within B158DRAFT_2007 at 139.898 kb on + strand, within B158DRAFT_2007 at 139.912 kb on - strand, within B158DRAFT_2007 at 140.007 kb on - strand at 140.014 kb on + strand, within B158DRAFT_2008 at 140.020 kb on - strand, within B158DRAFT_2008 at 140.044 kb on + strand, within B158DRAFT_2008 at 140.052 kb on - strand, within B158DRAFT_2008 at 140.103 kb on + strand, within B158DRAFT_2008 at 140.111 kb on - strand, within B158DRAFT_2008 at 140.239 kb on + strand, within B158DRAFT_2008 at 140.246 kb on + strand, within B158DRAFT_2008 at 140.254 kb on - strand, within B158DRAFT_2008 at 140.296 kb on - strand, within B158DRAFT_2008 at 140.321 kb on + strand, within B158DRAFT_2008 at 140.321 kb on + strand, within B158DRAFT_2008 at 140.324 kb on - strand, within B158DRAFT_2008 at 140.329 kb on - strand, within B158DRAFT_2008 at 140.349 kb on + strand at 140.370 kb on - strand at 140.389 kb on + strand at 140.389 kb on + strand at 140.397 kb on - strand at 140.397 kb on - strand at 140.397 kb on - strand at 140.415 kb on + strand, within B158DRAFT_2009 at 140.468 kb on + strand, within B158DRAFT_2009 at 140.470 kb on + strand, within B158DRAFT_2009 at 140.471 kb on - strand, within B158DRAFT_2009 at 140.578 kb on - strand, within B158DRAFT_2009 at 140.592 kb on - strand, within B158DRAFT_2009 at 140.655 kb on + strand at 140.663 kb on - strand at 140.676 kb on + strand at 140.779 kb on + strand at 140.800 kb on + strand at 140.800 kb on + strand at 140.800 kb on + strand at 140.800 kb on + strand at 140.800 kb on + strand at 140.808 kb on - strand, within B158DRAFT_2010 at 140.808 kb on - strand, within B158DRAFT_2010 at 140.897 kb on - strand, within B158DRAFT_2010 at 140.897 kb on - strand, within B158DRAFT_2010 at 140.901 kb on + strand, within B158DRAFT_2010 at 140.923 kb on - strand, within B158DRAFT_2010
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 138,579 + B158DRAFT_2005 0.40 +2.0 138,579 + B158DRAFT_2005 0.40 -1.4 138,579 + B158DRAFT_2005 0.40 +0.7 138,579 + B158DRAFT_2005 0.40 -0.9 138,579 + B158DRAFT_2005 0.40 +1.9 138,587 - B158DRAFT_2005 0.41 +0.1 138,587 - B158DRAFT_2005 0.41 -1.5 138,587 - B158DRAFT_2005 0.41 -0.7 138,597 - B158DRAFT_2005 0.42 -1.3 138,615 - B158DRAFT_2005 0.44 +0.5 138,629 + B158DRAFT_2005 0.46 -0.9 138,629 + B158DRAFT_2005 0.46 -0.9 138,637 - B158DRAFT_2005 0.47 -2.1 138,724 + B158DRAFT_2005 0.57 -0.7 138,724 + B158DRAFT_2005 0.57 +0.5 138,807 + B158DRAFT_2005 0.67 -0.7 138,807 + B158DRAFT_2005 0.67 -0.7 138,815 - B158DRAFT_2005 0.68 +1.8 138,815 - B158DRAFT_2005 0.68 -1.5 138,826 + B158DRAFT_2005 0.69 +2.1 138,838 + B158DRAFT_2005 0.71 +4.0 138,953 + B158DRAFT_2005 0.85 -0.8 138,953 + B158DRAFT_2005 0.85 +0.7 138,958 + B158DRAFT_2005 0.85 -2.3 138,958 - B158DRAFT_2005 0.85 +0.2 138,961 - B158DRAFT_2005 0.86 -0.4 138,961 - B158DRAFT_2005 0.86 +2.3 138,961 - B158DRAFT_2005 0.86 -1.2 138,978 + B158DRAFT_2005 0.88 -2.1 138,986 - B158DRAFT_2005 0.89 -1.1 138,986 - B158DRAFT_2005 0.89 +0.8 139,040 + -2.4 139,168 + B158DRAFT_2006 0.16 -1.6 139,207 - B158DRAFT_2006 0.26 -0.2 139,215 + B158DRAFT_2006 0.28 -0.5 139,223 - B158DRAFT_2006 0.30 +2.0 139,257 + B158DRAFT_2006 0.38 +0.1 139,350 + B158DRAFT_2006 0.62 -1.5 139,350 + B158DRAFT_2006 0.62 +0.8 139,358 - B158DRAFT_2006 0.64 +0.5 139,374 + B158DRAFT_2006 0.68 +0.2 139,384 - B158DRAFT_2006 0.70 +1.3 139,384 - B158DRAFT_2006 0.70 +0.3 139,661 + B158DRAFT_2007 0.26 -1.1 139,673 + B158DRAFT_2007 0.28 -1.6 139,673 + B158DRAFT_2007 0.28 +0.1 139,673 + B158DRAFT_2007 0.28 -0.2 139,681 - B158DRAFT_2007 0.30 +2.4 139,681 - B158DRAFT_2007 0.30 -1.1 139,681 - B158DRAFT_2007 0.30 +0.6 139,681 - B158DRAFT_2007 0.30 +0.4 139,681 - B158DRAFT_2007 0.30 +0.4 139,681 - B158DRAFT_2007 0.30 +2.3 139,681 - B158DRAFT_2007 0.30 -0.0 139,683 + B158DRAFT_2007 0.31 -0.0 139,683 + B158DRAFT_2007 0.31 -0.1 139,683 + B158DRAFT_2007 0.31 -0.0 139,683 + B158DRAFT_2007 0.31 +0.1 139,683 + B158DRAFT_2007 0.31 -1.4 139,683 + B158DRAFT_2007 0.31 -0.1 139,683 + B158DRAFT_2007 0.31 +1.3 139,683 + B158DRAFT_2007 0.31 -0.7 139,688 + B158DRAFT_2007 0.32 -0.5 139,688 + B158DRAFT_2007 0.32 -0.5 139,688 + B158DRAFT_2007 0.32 -0.8 139,688 + B158DRAFT_2007 0.32 -0.7 139,688 + B158DRAFT_2007 0.32 -0.9 139,688 + B158DRAFT_2007 0.32 -0.6 139,691 - B158DRAFT_2007 0.33 -0.5 139,696 - B158DRAFT_2007 0.34 +0.2 139,696 - B158DRAFT_2007 0.34 -2.0 139,696 - B158DRAFT_2007 0.34 -2.6 139,696 - B158DRAFT_2007 0.34 +1.4 139,696 - B158DRAFT_2007 0.34 +3.2 139,696 - B158DRAFT_2007 0.34 +0.7 139,696 - B158DRAFT_2007 0.34 -2.9 139,753 - B158DRAFT_2007 0.47 -0.4 139,827 + B158DRAFT_2007 0.65 +0.6 139,827 + B158DRAFT_2007 0.65 +1.2 139,827 + B158DRAFT_2007 0.65 +0.8 139,827 + B158DRAFT_2007 0.65 -1.8 139,835 - B158DRAFT_2007 0.67 -0.7 139,835 - B158DRAFT_2007 0.67 -1.2 139,884 + B158DRAFT_2007 0.78 -0.5 139,884 + B158DRAFT_2007 0.78 -0.3 139,892 - B158DRAFT_2007 0.80 -2.1 139,898 + B158DRAFT_2007 0.82 -2.3 139,912 - B158DRAFT_2007 0.85 -2.0 140,007 - -1.6 140,014 + B158DRAFT_2008 0.11 -2.4 140,020 - B158DRAFT_2008 0.12 -1.6 140,044 + B158DRAFT_2008 0.18 -0.7 140,052 - B158DRAFT_2008 0.20 -1.9 140,103 + B158DRAFT_2008 0.33 -1.5 140,111 - B158DRAFT_2008 0.35 -0.2 140,239 + B158DRAFT_2008 0.67 -1.1 140,246 + B158DRAFT_2008 0.69 -0.3 140,254 - B158DRAFT_2008 0.71 -0.9 140,296 - B158DRAFT_2008 0.81 -0.8 140,321 + B158DRAFT_2008 0.87 +0.0 140,321 + B158DRAFT_2008 0.87 -0.6 140,324 - B158DRAFT_2008 0.88 +0.9 140,329 - B158DRAFT_2008 0.89 -0.7 140,349 + +0.6 140,370 - +1.0 140,389 + -2.8 140,389 + -0.3 140,397 - -1.5 140,397 - -0.9 140,397 - -0.2 140,415 + B158DRAFT_2009 0.11 +0.8 140,468 + B158DRAFT_2009 0.32 -0.7 140,470 + B158DRAFT_2009 0.33 -1.2 140,471 - B158DRAFT_2009 0.33 -1.9 140,578 - B158DRAFT_2009 0.75 -1.3 140,592 - B158DRAFT_2009 0.81 -0.3 140,655 + -1.7 140,663 - -1.2 140,676 + +0.1 140,779 + -1.5 140,800 + -1.4 140,800 + -0.5 140,800 + +0.5 140,800 + +2.6 140,800 + -2.8 140,808 - B158DRAFT_2010 0.10 -0.8 140,808 - B158DRAFT_2010 0.10 -1.2 140,897 - B158DRAFT_2010 0.35 -0.3 140,897 - B158DRAFT_2010 0.35 +0.8 140,901 + B158DRAFT_2010 0.36 +0.0 140,923 - B158DRAFT_2010 0.43 -0.4
Or see this region's nucleotide sequence