Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1976

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1975 and B158DRAFT_1976 are separated by 23 nucleotidesB158DRAFT_1976 and B158DRAFT_1977 overlap by 8 nucleotides B158DRAFT_1975: B158DRAFT_1975 - Ornithine carbamoyltransferase, at 110,232 to 111,239 _1975 B158DRAFT_1976: B158DRAFT_1976 - argininosuccinate synthase (EC 6.3.4.5), at 111,263 to 112,474 _1976 B158DRAFT_1977: B158DRAFT_1977 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases, at 112,467 to 113,606 _1977 Position (kb) 111 112 113Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 110.268 kb on - strandat 110.327 kb on - strandat 110.327 kb on - strandat 110.327 kb on - strandat 110.419 kb on - strand, within B158DRAFT_1975at 110.435 kb on - strand, within B158DRAFT_1975at 110.565 kb on + strand, within B158DRAFT_1975at 110.629 kb on + strand, within B158DRAFT_1975at 110.651 kb on - strand, within B158DRAFT_1975at 110.690 kb on + strand, within B158DRAFT_1975at 110.690 kb on + strand, within B158DRAFT_1975at 110.690 kb on + strand, within B158DRAFT_1975at 110.690 kb on + strand, within B158DRAFT_1975at 110.698 kb on - strand, within B158DRAFT_1975at 110.698 kb on - strand, within B158DRAFT_1975at 110.752 kb on - strand, within B158DRAFT_1975at 110.759 kb on + strand, within B158DRAFT_1975at 110.759 kb on + strand, within B158DRAFT_1975at 110.766 kb on + strand, within B158DRAFT_1975at 110.774 kb on - strand, within B158DRAFT_1975at 110.783 kb on + strand, within B158DRAFT_1975at 110.791 kb on - strand, within B158DRAFT_1975at 110.834 kb on + strand, within B158DRAFT_1975at 110.842 kb on - strand, within B158DRAFT_1975at 110.844 kb on + strand, within B158DRAFT_1975at 110.891 kb on - strand, within B158DRAFT_1975at 110.932 kb on + strand, within B158DRAFT_1975at 110.940 kb on - strand, within B158DRAFT_1975at 110.940 kb on - strand, within B158DRAFT_1975at 110.940 kb on - strand, within B158DRAFT_1975at 110.940 kb on - strand, within B158DRAFT_1975at 110.940 kb on - strand, within B158DRAFT_1975at 110.950 kb on - strand, within B158DRAFT_1975at 110.995 kb on + strand, within B158DRAFT_1975at 111.025 kb on + strand, within B158DRAFT_1975at 111.033 kb on - strand, within B158DRAFT_1975at 111.146 kb on - strandat 111.146 kb on - strandat 111.174 kb on + strandat 111.182 kb on - strandat 111.289 kb on + strandat 111.342 kb on - strandat 111.437 kb on - strand, within B158DRAFT_1976at 111.518 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.527 kb on + strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.535 kb on - strand, within B158DRAFT_1976at 111.540 kb on - strand, within B158DRAFT_1976at 111.620 kb on + strand, within B158DRAFT_1976at 111.628 kb on - strand, within B158DRAFT_1976at 111.670 kb on - strand, within B158DRAFT_1976at 111.720 kb on - strand, within B158DRAFT_1976at 111.813 kb on + strand, within B158DRAFT_1976at 111.821 kb on - strand, within B158DRAFT_1976at 111.946 kb on - strand, within B158DRAFT_1976at 112.067 kb on - strand, within B158DRAFT_1976at 112.096 kb on + strand, within B158DRAFT_1976at 112.105 kb on + strand, within B158DRAFT_1976at 112.115 kb on + strand, within B158DRAFT_1976at 112.123 kb on - strand, within B158DRAFT_1976at 112.123 kb on - strand, within B158DRAFT_1976at 112.123 kb on - strand, within B158DRAFT_1976at 112.167 kb on - strand, within B158DRAFT_1976at 112.213 kb on - strand, within B158DRAFT_1976at 112.435 kb on - strandat 112.444 kb on + strandat 112.445 kb on - strandat 112.668 kb on - strand, within B158DRAFT_1977at 112.722 kb on + strand, within B158DRAFT_1977at 112.730 kb on - strand, within B158DRAFT_1977at 112.739 kb on - strand, within B158DRAFT_1977at 112.789 kb on + strand, within B158DRAFT_1977at 112.797 kb on - strand, within B158DRAFT_1977at 112.837 kb on + strand, within B158DRAFT_1977at 112.970 kb on + strand, within B158DRAFT_1977at 112.978 kb on - strand, within B158DRAFT_1977at 112.980 kb on + strand, within B158DRAFT_1977at 112.999 kb on - strand, within B158DRAFT_1977at 113.032 kb on - strand, within B158DRAFT_1977at 113.049 kb on - strand, within B158DRAFT_1977at 113.100 kb on - strand, within B158DRAFT_1977at 113.233 kb on + strand, within B158DRAFT_1977at 113.236 kb on - strand, within B158DRAFT_1977at 113.290 kb on - strand, within B158DRAFT_1977at 113.327 kb on + strand, within B158DRAFT_1977at 113.335 kb on - strand, within B158DRAFT_1977at 113.368 kb on + strand, within B158DRAFT_1977at 113.424 kb on - strand, within B158DRAFT_1977at 113.441 kb on + strand, within B158DRAFT_1977

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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110,268 - -0.4
110,327 - -0.9
110,327 - +4.2
110,327 - -0.4
110,419 - B158DRAFT_1975 0.19 -0.4
110,435 - B158DRAFT_1975 0.20 +0.4
110,565 + B158DRAFT_1975 0.33 -1.3
110,629 + B158DRAFT_1975 0.39 -0.9
110,651 - B158DRAFT_1975 0.42 +0.3
110,690 + B158DRAFT_1975 0.45 -1.1
110,690 + B158DRAFT_1975 0.45 +0.9
110,690 + B158DRAFT_1975 0.45 -0.1
110,690 + B158DRAFT_1975 0.45 +2.4
110,698 - B158DRAFT_1975 0.46 -2.0
110,698 - B158DRAFT_1975 0.46 +1.4
110,752 - B158DRAFT_1975 0.52 -1.7
110,759 + B158DRAFT_1975 0.52 +0.2
110,759 + B158DRAFT_1975 0.52 -0.7
110,766 + B158DRAFT_1975 0.53 -1.1
110,774 - B158DRAFT_1975 0.54 -0.6
110,783 + B158DRAFT_1975 0.55 -1.8
110,791 - B158DRAFT_1975 0.55 -2.2
110,834 + B158DRAFT_1975 0.60 +0.8
110,842 - B158DRAFT_1975 0.61 -2.1
110,844 + B158DRAFT_1975 0.61 -3.1
110,891 - B158DRAFT_1975 0.65 -0.7
110,932 + B158DRAFT_1975 0.69 +0.0
110,940 - B158DRAFT_1975 0.70 -0.3
110,940 - B158DRAFT_1975 0.70 -0.1
110,940 - B158DRAFT_1975 0.70 -1.0
110,940 - B158DRAFT_1975 0.70 +0.0
110,940 - B158DRAFT_1975 0.70 +0.0
110,950 - B158DRAFT_1975 0.71 +0.3
110,995 + B158DRAFT_1975 0.76 -1.1
111,025 + B158DRAFT_1975 0.79 +0.2
111,033 - B158DRAFT_1975 0.79 -1.0
111,146 - +2.9
111,146 - -0.5
111,174 + +0.0
111,182 - +0.2
111,289 + -1.0
111,342 - -0.6
111,437 - B158DRAFT_1976 0.14 -0.4
111,518 + B158DRAFT_1976 0.21 +0.6
111,527 + B158DRAFT_1976 0.22 -0.1
111,527 + B158DRAFT_1976 0.22 -1.1
111,527 + B158DRAFT_1976 0.22 +8.1
111,527 + B158DRAFT_1976 0.22 -1.0
111,527 + B158DRAFT_1976 0.22 +0.4
111,527 + B158DRAFT_1976 0.22 -0.3
111,527 + B158DRAFT_1976 0.22 +1.4
111,527 + B158DRAFT_1976 0.22 -1.3
111,527 + B158DRAFT_1976 0.22 -0.4
111,527 + B158DRAFT_1976 0.22 -0.5
111,527 + B158DRAFT_1976 0.22 -0.1
111,527 + B158DRAFT_1976 0.22 +1.4
111,527 + B158DRAFT_1976 0.22 +1.7
111,527 + B158DRAFT_1976 0.22 +0.4
111,535 - B158DRAFT_1976 0.22 -0.2
111,535 - B158DRAFT_1976 0.22 -0.4
111,535 - B158DRAFT_1976 0.22 -0.2
111,535 - B158DRAFT_1976 0.22 +4.0
111,535 - B158DRAFT_1976 0.22 +0.3
111,535 - B158DRAFT_1976 0.22 -1.2
111,535 - B158DRAFT_1976 0.22 +1.4
111,535 - B158DRAFT_1976 0.22 -0.6
111,535 - B158DRAFT_1976 0.22 -1.0
111,535 - B158DRAFT_1976 0.22 -0.3
111,535 - B158DRAFT_1976 0.22 -0.4
111,540 - B158DRAFT_1976 0.23 +1.0
111,620 + B158DRAFT_1976 0.29 -0.4
111,628 - B158DRAFT_1976 0.30 -2.2
111,670 - B158DRAFT_1976 0.34 -1.8
111,720 - B158DRAFT_1976 0.38 +2.4
111,813 + B158DRAFT_1976 0.45 -1.8
111,821 - B158DRAFT_1976 0.46 -2.0
111,946 - B158DRAFT_1976 0.56 -1.4
112,067 - B158DRAFT_1976 0.66 +1.0
112,096 + B158DRAFT_1976 0.69 -1.4
112,105 + B158DRAFT_1976 0.69 -2.7
112,115 + B158DRAFT_1976 0.70 +0.4
112,123 - B158DRAFT_1976 0.71 -0.2
112,123 - B158DRAFT_1976 0.71 -1.8
112,123 - B158DRAFT_1976 0.71 -1.4
112,167 - B158DRAFT_1976 0.75 -0.7
112,213 - B158DRAFT_1976 0.78 +0.4
112,435 - -1.6
112,444 + +0.2
112,445 - -0.3
112,668 - B158DRAFT_1977 0.18 -0.7
112,722 + B158DRAFT_1977 0.22 -0.7
112,730 - B158DRAFT_1977 0.23 -1.8
112,739 - B158DRAFT_1977 0.24 -2.6
112,789 + B158DRAFT_1977 0.28 -2.1
112,797 - B158DRAFT_1977 0.29 -0.7
112,837 + B158DRAFT_1977 0.32 -0.2
112,970 + B158DRAFT_1977 0.44 +0.1
112,978 - B158DRAFT_1977 0.45 +1.3
112,980 + B158DRAFT_1977 0.45 -0.2
112,999 - B158DRAFT_1977 0.47 +0.7
113,032 - B158DRAFT_1977 0.50 +0.4
113,049 - B158DRAFT_1977 0.51 +1.1
113,100 - B158DRAFT_1977 0.56 -0.9
113,233 + B158DRAFT_1977 0.67 -0.3
113,236 - B158DRAFT_1977 0.67 +0.6
113,290 - B158DRAFT_1977 0.72 -1.0
113,327 + B158DRAFT_1977 0.75 +2.2
113,335 - B158DRAFT_1977 0.76 -3.1
113,368 + B158DRAFT_1977 0.79 -0.1
113,424 - B158DRAFT_1977 0.84 -1.7
113,441 + B158DRAFT_1977 0.85 -1.1

Or see this region's nucleotide sequence