Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1912 and B158DRAFT_1913 are separated by 70 nucleotides B158DRAFT_1913 and B158DRAFT_1914 are separated by 164 nucleotides B158DRAFT_1914 and B158DRAFT_1915 overlap by 4 nucleotides
B158DRAFT_1912: B158DRAFT_1912 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 47,295 to 48,413
_1912
B158DRAFT_1913: B158DRAFT_1913 - Membrane protease subunits, stomatin/prohibitin homologs, at 48,484 to 49,848
_1913
B158DRAFT_1914: B158DRAFT_1914 - 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78), at 50,013 to 50,498
_1914
B158DRAFT_1915: B158DRAFT_1915 - NusB antitermination factor, at 50,495 to 50,923
_1915
Position (kb) 48
49
50 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 48.408 kb on - strand at 48.577 kb on - strand at 48.583 kb on + strand at 48.613 kb on + strand at 48.721 kb on + strand, within B158DRAFT_1913 at 48.729 kb on - strand, within B158DRAFT_1913 at 48.902 kb on + strand, within B158DRAFT_1913 at 48.910 kb on - strand, within B158DRAFT_1913 at 48.927 kb on + strand, within B158DRAFT_1913 at 48.927 kb on + strand, within B158DRAFT_1913 at 49.040 kb on + strand, within B158DRAFT_1913 at 49.048 kb on + strand, within B158DRAFT_1913 at 49.056 kb on - strand, within B158DRAFT_1913 at 49.083 kb on + strand, within B158DRAFT_1913 at 49.126 kb on + strand, within B158DRAFT_1913 at 49.229 kb on - strand, within B158DRAFT_1913 at 49.238 kb on + strand, within B158DRAFT_1913 at 49.301 kb on + strand, within B158DRAFT_1913 at 49.309 kb on - strand, within B158DRAFT_1913 at 49.325 kb on + strand, within B158DRAFT_1913 at 49.325 kb on + strand, within B158DRAFT_1913 at 49.325 kb on + strand, within B158DRAFT_1913 at 49.353 kb on - strand, within B158DRAFT_1913 at 49.368 kb on + strand, within B158DRAFT_1913 at 49.376 kb on - strand, within B158DRAFT_1913 at 49.504 kb on - strand, within B158DRAFT_1913 at 49.530 kb on + strand, within B158DRAFT_1913 at 49.538 kb on - strand, within B158DRAFT_1913 at 49.600 kb on - strand, within B158DRAFT_1913 at 49.602 kb on - strand, within B158DRAFT_1913 at 49.692 kb on + strand, within B158DRAFT_1913 at 49.700 kb on + strand, within B158DRAFT_1913 at 49.728 kb on - strand at 49.911 kb on + strand at 49.911 kb on + strand at 49.923 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 48,408 - +0.9 48,577 - -1.3 48,583 + +1.9 48,613 + +4.9 48,721 + B158DRAFT_1913 0.17 -1.1 48,729 - B158DRAFT_1913 0.18 -0.8 48,902 + B158DRAFT_1913 0.31 +0.2 48,910 - B158DRAFT_1913 0.31 -0.6 48,927 + B158DRAFT_1913 0.32 -0.9 48,927 + B158DRAFT_1913 0.32 -0.9 49,040 + B158DRAFT_1913 0.41 -0.9 49,048 + B158DRAFT_1913 0.41 +0.6 49,056 - B158DRAFT_1913 0.42 -0.7 49,083 + B158DRAFT_1913 0.44 -1.9 49,126 + B158DRAFT_1913 0.47 -0.9 49,229 - B158DRAFT_1913 0.55 -1.2 49,238 + B158DRAFT_1913 0.55 -0.9 49,301 + B158DRAFT_1913 0.60 -0.7 49,309 - B158DRAFT_1913 0.60 -1.3 49,325 + B158DRAFT_1913 0.62 -2.4 49,325 + B158DRAFT_1913 0.62 -0.3 49,325 + B158DRAFT_1913 0.62 -2.6 49,353 - B158DRAFT_1913 0.64 -0.5 49,368 + B158DRAFT_1913 0.65 -0.7 49,376 - B158DRAFT_1913 0.65 -1.1 49,504 - B158DRAFT_1913 0.75 -0.3 49,530 + B158DRAFT_1913 0.77 +0.5 49,538 - B158DRAFT_1913 0.77 -1.5 49,600 - B158DRAFT_1913 0.82 -1.3 49,602 - B158DRAFT_1913 0.82 -1.6 49,692 + B158DRAFT_1913 0.88 -2.7 49,700 + B158DRAFT_1913 0.89 +0.3 49,728 - +0.9 49,911 + -0.8 49,911 + -1.8 49,923 + -0.2
Or see this region's nucleotide sequence