Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1806 and B158DRAFT_1807 are separated by 82 nucleotides B158DRAFT_1807 and B158DRAFT_1808 are separated by 322 nucleotides
B158DRAFT_1806: B158DRAFT_1806 - Glutamate dehydrogenase/leucine dehydrogenase, at 1,904,943 to 1,905,980
_1806
B158DRAFT_1807: B158DRAFT_1807 - hypothetical protein, at 1,906,063 to 1,907,289
_1807
B158DRAFT_1808: B158DRAFT_1808 - Predicted permease, DMT superfamily, at 1,907,612 to 1,908,484
_1808
Position (kb)
1906
1907
1908 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1906.068 kb on - strand at 1906.106 kb on - strand at 1906.124 kb on - strand at 1906.189 kb on + strand, within B158DRAFT_1807 at 1906.213 kb on - strand, within B158DRAFT_1807 at 1906.359 kb on + strand, within B158DRAFT_1807 at 1906.359 kb on + strand, within B158DRAFT_1807 at 1906.369 kb on - strand, within B158DRAFT_1807 at 1906.398 kb on - strand, within B158DRAFT_1807 at 1906.505 kb on + strand, within B158DRAFT_1807 at 1906.505 kb on + strand, within B158DRAFT_1807 at 1906.513 kb on - strand, within B158DRAFT_1807 at 1906.515 kb on + strand, within B158DRAFT_1807 at 1906.581 kb on + strand, within B158DRAFT_1807 at 1906.589 kb on + strand, within B158DRAFT_1807 at 1906.597 kb on - strand, within B158DRAFT_1807 at 1906.652 kb on - strand, within B158DRAFT_1807 at 1906.835 kb on + strand, within B158DRAFT_1807 at 1906.865 kb on + strand, within B158DRAFT_1807 at 1906.865 kb on + strand, within B158DRAFT_1807 at 1906.896 kb on - strand, within B158DRAFT_1807 at 1906.916 kb on + strand, within B158DRAFT_1807 at 1906.916 kb on + strand, within B158DRAFT_1807 at 1906.924 kb on - strand, within B158DRAFT_1807 at 1906.930 kb on + strand, within B158DRAFT_1807 at 1906.937 kb on + strand, within B158DRAFT_1807 at 1906.999 kb on - strand, within B158DRAFT_1807 at 1907.008 kb on - strand, within B158DRAFT_1807 at 1907.010 kb on + strand, within B158DRAFT_1807 at 1907.051 kb on + strand, within B158DRAFT_1807 at 1907.072 kb on + strand, within B158DRAFT_1807 at 1907.080 kb on + strand, within B158DRAFT_1807 at 1907.080 kb on - strand, within B158DRAFT_1807 at 1907.088 kb on + strand, within B158DRAFT_1807 at 1907.088 kb on + strand, within B158DRAFT_1807 at 1907.088 kb on + strand, within B158DRAFT_1807 at 1907.096 kb on - strand, within B158DRAFT_1807 at 1907.096 kb on - strand, within B158DRAFT_1807 at 1907.131 kb on - strand, within B158DRAFT_1807 at 1907.265 kb on - strand at 1907.272 kb on + strand at 1907.289 kb on + strand at 1907.291 kb on + strand at 1907.297 kb on - strand at 1907.354 kb on - strand at 1907.566 kb on + strand at 1907.566 kb on + strand at 1907.566 kb on + strand at 1907.568 kb on + strand at 1907.574 kb on - strand at 1907.574 kb on - strand at 1907.674 kb on - strand at 1907.693 kb on + strand at 1907.703 kb on + strand, within B158DRAFT_1808 at 1907.706 kb on - strand, within B158DRAFT_1808 at 1907.706 kb on - strand, within B158DRAFT_1808 at 1907.711 kb on - strand, within B158DRAFT_1808 at 1907.711 kb on - strand, within B158DRAFT_1808 at 1907.763 kb on + strand, within B158DRAFT_1808 at 1907.802 kb on - strand, within B158DRAFT_1808 at 1907.807 kb on - strand, within B158DRAFT_1808 at 1907.835 kb on + strand, within B158DRAFT_1808 at 1907.860 kb on + strand, within B158DRAFT_1808 at 1907.860 kb on + strand, within B158DRAFT_1808 at 1907.860 kb on + strand, within B158DRAFT_1808 at 1907.860 kb on + strand, within B158DRAFT_1808 at 1907.860 kb on + strand, within B158DRAFT_1808 at 1907.860 kb on + strand, within B158DRAFT_1808 at 1907.862 kb on - strand, within B158DRAFT_1808 at 1907.862 kb on - strand, within B158DRAFT_1808 at 1907.868 kb on - strand, within B158DRAFT_1808 at 1907.868 kb on - strand, within B158DRAFT_1808 at 1907.868 kb on - strand, within B158DRAFT_1808 at 1907.868 kb on - strand, within B158DRAFT_1808 at 1907.913 kb on - strand, within B158DRAFT_1808 at 1907.961 kb on + strand, within B158DRAFT_1808 at 1907.961 kb on + strand, within B158DRAFT_1808 at 1907.961 kb on + strand, within B158DRAFT_1808 at 1907.961 kb on + strand, within B158DRAFT_1808 at 1908.032 kb on + strand, within B158DRAFT_1808 at 1908.037 kb on + strand, within B158DRAFT_1808 at 1908.040 kb on - strand, within B158DRAFT_1808 at 1908.040 kb on - strand, within B158DRAFT_1808 at 1908.040 kb on - strand, within B158DRAFT_1808 at 1908.069 kb on - strand, within B158DRAFT_1808 at 1908.078 kb on + strand, within B158DRAFT_1808 at 1908.086 kb on - strand, within B158DRAFT_1808 at 1908.113 kb on + strand, within B158DRAFT_1808 at 1908.121 kb on - strand, within B158DRAFT_1808 at 1908.121 kb on - strand, within B158DRAFT_1808 at 1908.121 kb on - strand, within B158DRAFT_1808 at 1908.125 kb on + strand, within B158DRAFT_1808 at 1908.126 kb on - strand, within B158DRAFT_1808 at 1908.158 kb on - strand, within B158DRAFT_1808 at 1908.164 kb on + strand, within B158DRAFT_1808 at 1908.172 kb on - strand, within B158DRAFT_1808 at 1908.172 kb on - strand, within B158DRAFT_1808 at 1908.255 kb on + strand, within B158DRAFT_1808 at 1908.260 kb on + strand, within B158DRAFT_1808 at 1908.260 kb on + strand, within B158DRAFT_1808 at 1908.260 kb on + strand, within B158DRAFT_1808 at 1908.260 kb on + strand, within B158DRAFT_1808
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 1,906,068 - +0.6 1,906,106 - +2.1 1,906,124 - +0.4 1,906,189 + B158DRAFT_1807 0.10 +1.3 1,906,213 - B158DRAFT_1807 0.12 +0.2 1,906,359 + B158DRAFT_1807 0.24 -0.2 1,906,359 + B158DRAFT_1807 0.24 +1.5 1,906,369 - B158DRAFT_1807 0.25 +0.5 1,906,398 - B158DRAFT_1807 0.27 +1.6 1,906,505 + B158DRAFT_1807 0.36 -1.2 1,906,505 + B158DRAFT_1807 0.36 +2.4 1,906,513 - B158DRAFT_1807 0.37 +0.6 1,906,515 + B158DRAFT_1807 0.37 +1.4 1,906,581 + B158DRAFT_1807 0.42 +0.8 1,906,589 + B158DRAFT_1807 0.43 +1.6 1,906,597 - B158DRAFT_1807 0.44 +1.3 1,906,652 - B158DRAFT_1807 0.48 +0.3 1,906,835 + B158DRAFT_1807 0.63 +1.2 1,906,865 + B158DRAFT_1807 0.65 +0.7 1,906,865 + B158DRAFT_1807 0.65 +1.0 1,906,896 - B158DRAFT_1807 0.68 +0.7 1,906,916 + B158DRAFT_1807 0.70 -0.2 1,906,916 + B158DRAFT_1807 0.70 +1.4 1,906,924 - B158DRAFT_1807 0.70 +2.4 1,906,930 + B158DRAFT_1807 0.71 +1.2 1,906,937 + B158DRAFT_1807 0.71 +0.7 1,906,999 - B158DRAFT_1807 0.76 +1.7 1,907,008 - B158DRAFT_1807 0.77 +1.3 1,907,010 + B158DRAFT_1807 0.77 +1.4 1,907,051 + B158DRAFT_1807 0.81 +1.2 1,907,072 + B158DRAFT_1807 0.82 +2.5 1,907,080 + B158DRAFT_1807 0.83 +1.0 1,907,080 - B158DRAFT_1807 0.83 +1.4 1,907,088 + B158DRAFT_1807 0.84 +1.0 1,907,088 + B158DRAFT_1807 0.84 +0.8 1,907,088 + B158DRAFT_1807 0.84 +1.4 1,907,096 - B158DRAFT_1807 0.84 +1.1 1,907,096 - B158DRAFT_1807 0.84 +1.2 1,907,131 - B158DRAFT_1807 0.87 +1.2 1,907,265 - -0.8 1,907,272 + +1.2 1,907,289 + +2.8 1,907,291 + +1.8 1,907,297 - +1.5 1,907,354 - +0.9 1,907,566 + -3.0 1,907,566 + +1.4 1,907,566 + -0.6 1,907,568 + +0.0 1,907,574 - +1.8 1,907,574 - +0.3 1,907,674 - -0.8 1,907,693 + -0.9 1,907,703 + B158DRAFT_1808 0.10 +1.7 1,907,706 - B158DRAFT_1808 0.11 -0.4 1,907,706 - B158DRAFT_1808 0.11 +0.0 1,907,711 - B158DRAFT_1808 0.11 +0.3 1,907,711 - B158DRAFT_1808 0.11 +1.6 1,907,763 + B158DRAFT_1808 0.17 -0.9 1,907,802 - B158DRAFT_1808 0.22 -0.2 1,907,807 - B158DRAFT_1808 0.22 -1.8 1,907,835 + B158DRAFT_1808 0.26 +0.3 1,907,860 + B158DRAFT_1808 0.28 +1.2 1,907,860 + B158DRAFT_1808 0.28 -3.2 1,907,860 + B158DRAFT_1808 0.28 -0.3 1,907,860 + B158DRAFT_1808 0.28 -0.4 1,907,860 + B158DRAFT_1808 0.28 +0.0 1,907,860 + B158DRAFT_1808 0.28 +0.8 1,907,862 - B158DRAFT_1808 0.29 +2.6 1,907,862 - B158DRAFT_1808 0.29 +1.6 1,907,868 - B158DRAFT_1808 0.29 -0.1 1,907,868 - B158DRAFT_1808 0.29 -0.4 1,907,868 - B158DRAFT_1808 0.29 +0.3 1,907,868 - B158DRAFT_1808 0.29 -1.5 1,907,913 - B158DRAFT_1808 0.34 -1.0 1,907,961 + B158DRAFT_1808 0.40 -2.5 1,907,961 + B158DRAFT_1808 0.40 -3.0 1,907,961 + B158DRAFT_1808 0.40 -0.1 1,907,961 + B158DRAFT_1808 0.40 -0.6 1,908,032 + B158DRAFT_1808 0.48 -0.6 1,908,037 + B158DRAFT_1808 0.49 +0.6 1,908,040 - B158DRAFT_1808 0.49 +0.1 1,908,040 - B158DRAFT_1808 0.49 -0.6 1,908,040 - B158DRAFT_1808 0.49 -2.1 1,908,069 - B158DRAFT_1808 0.52 -0.6 1,908,078 + B158DRAFT_1808 0.53 +1.0 1,908,086 - B158DRAFT_1808 0.54 -1.2 1,908,113 + B158DRAFT_1808 0.57 +0.5 1,908,121 - B158DRAFT_1808 0.58 -1.6 1,908,121 - B158DRAFT_1808 0.58 -0.6 1,908,121 - B158DRAFT_1808 0.58 +0.0 1,908,125 + B158DRAFT_1808 0.59 +0.2 1,908,126 - B158DRAFT_1808 0.59 -0.7 1,908,158 - B158DRAFT_1808 0.63 -0.6 1,908,164 + B158DRAFT_1808 0.63 -0.7 1,908,172 - B158DRAFT_1808 0.64 -2.2 1,908,172 - B158DRAFT_1808 0.64 -0.7 1,908,255 + B158DRAFT_1808 0.74 -0.3 1,908,260 + B158DRAFT_1808 0.74 +1.5 1,908,260 + B158DRAFT_1808 0.74 +1.8 1,908,260 + B158DRAFT_1808 0.74 -1.0 1,908,260 + B158DRAFT_1808 0.74 -1.2
Or see this region's nucleotide sequence