Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1796

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1795 and B158DRAFT_1796 are separated by 180 nucleotidesB158DRAFT_1796 and B158DRAFT_1797 are separated by 158 nucleotides B158DRAFT_1795: B158DRAFT_1795 - Ion transport protein., at 1,888,694 to 1,889,593 _1795 B158DRAFT_1796: B158DRAFT_1796 - uncharacterized domain HDIG, at 1,889,774 to 1,890,991 _1796 B158DRAFT_1797: B158DRAFT_1797 - sodium/proton antiporter, CPA1 family (TC 2.A.36), at 1,891,150 to 1,893,021 _1797 Position (kb) 1889 1890 1891Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1888.802 kb on + strand, within B158DRAFT_1795at 1888.824 kb on + strand, within B158DRAFT_1795at 1888.832 kb on - strand, within B158DRAFT_1795at 1888.918 kb on - strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.949 kb on + strand, within B158DRAFT_1795at 1888.952 kb on - strand, within B158DRAFT_1795at 1888.959 kb on - strand, within B158DRAFT_1795at 1888.959 kb on - strand, within B158DRAFT_1795at 1888.966 kb on - strand, within B158DRAFT_1795at 1888.970 kb on + strand, within B158DRAFT_1795at 1888.973 kb on - strand, within B158DRAFT_1795at 1888.983 kb on - strand, within B158DRAFT_1795at 1888.989 kb on - strand, within B158DRAFT_1795at 1889.039 kb on - strand, within B158DRAFT_1795at 1889.055 kb on + strand, within B158DRAFT_1795at 1889.057 kb on - strand, within B158DRAFT_1795at 1889.057 kb on - strand, within B158DRAFT_1795at 1889.100 kb on - strand, within B158DRAFT_1795at 1889.125 kb on + strand, within B158DRAFT_1795at 1889.132 kb on + strand, within B158DRAFT_1795at 1889.133 kb on - strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.140 kb on - strand, within B158DRAFT_1795at 1889.145 kb on - strand, within B158DRAFT_1795at 1889.145 kb on - strand, within B158DRAFT_1795at 1889.254 kb on + strand, within B158DRAFT_1795at 1889.305 kb on + strand, within B158DRAFT_1795at 1889.355 kb on + strand, within B158DRAFT_1795at 1889.355 kb on + strand, within B158DRAFT_1795at 1889.355 kb on + strand, within B158DRAFT_1795at 1889.355 kb on + strand, within B158DRAFT_1795at 1889.586 kb on + strandat 1889.662 kb on - strandat 1889.805 kb on + strandat 1889.829 kb on - strandat 1889.839 kb on - strandat 1889.842 kb on + strandat 1889.847 kb on + strandat 1889.850 kb on - strandat 1889.850 kb on - strandat 1889.855 kb on - strandat 1889.866 kb on - strandat 1889.948 kb on + strand, within B158DRAFT_1796at 1889.951 kb on - strand, within B158DRAFT_1796at 1889.953 kb on + strand, within B158DRAFT_1796at 1889.953 kb on + strand, within B158DRAFT_1796at 1889.953 kb on + strand, within B158DRAFT_1796at 1889.961 kb on - strand, within B158DRAFT_1796at 1889.961 kb on - strand, within B158DRAFT_1796at 1889.961 kb on - strand, within B158DRAFT_1796at 1889.961 kb on - strand, within B158DRAFT_1796at 1889.961 kb on - strand, within B158DRAFT_1796at 1889.985 kb on - strand, within B158DRAFT_1796at 1889.997 kb on + strand, within B158DRAFT_1796at 1889.997 kb on - strand, within B158DRAFT_1796at 1890.077 kb on + strand, within B158DRAFT_1796at 1890.143 kb on + strand, within B158DRAFT_1796at 1890.143 kb on + strand, within B158DRAFT_1796at 1890.143 kb on + strand, within B158DRAFT_1796at 1890.151 kb on - strand, within B158DRAFT_1796at 1890.151 kb on - strand, within B158DRAFT_1796at 1890.151 kb on - strand, within B158DRAFT_1796at 1890.182 kb on + strand, within B158DRAFT_1796at 1890.192 kb on + strand, within B158DRAFT_1796at 1890.200 kb on - strand, within B158DRAFT_1796at 1890.225 kb on + strand, within B158DRAFT_1796at 1890.227 kb on + strand, within B158DRAFT_1796at 1890.227 kb on + strand, within B158DRAFT_1796at 1890.227 kb on + strand, within B158DRAFT_1796at 1890.233 kb on - strand, within B158DRAFT_1796at 1890.233 kb on - strand, within B158DRAFT_1796at 1890.235 kb on - strand, within B158DRAFT_1796at 1890.235 kb on - strand, within B158DRAFT_1796at 1890.285 kb on - strand, within B158DRAFT_1796at 1890.337 kb on + strand, within B158DRAFT_1796at 1890.367 kb on + strand, within B158DRAFT_1796at 1890.373 kb on + strand, within B158DRAFT_1796at 1890.405 kb on + strand, within B158DRAFT_1796at 1890.429 kb on + strand, within B158DRAFT_1796at 1890.437 kb on - strand, within B158DRAFT_1796at 1890.437 kb on - strand, within B158DRAFT_1796at 1890.439 kb on + strand, within B158DRAFT_1796at 1890.439 kb on + strand, within B158DRAFT_1796at 1890.439 kb on + strand, within B158DRAFT_1796at 1890.439 kb on + strand, within B158DRAFT_1796at 1890.439 kb on + strand, within B158DRAFT_1796at 1890.447 kb on - strand, within B158DRAFT_1796at 1890.447 kb on - strand, within B158DRAFT_1796at 1890.519 kb on + strand, within B158DRAFT_1796at 1890.520 kb on + strand, within B158DRAFT_1796at 1890.527 kb on - strand, within B158DRAFT_1796at 1890.536 kb on + strand, within B158DRAFT_1796at 1890.544 kb on - strand, within B158DRAFT_1796at 1890.587 kb on + strand, within B158DRAFT_1796at 1890.614 kb on - strand, within B158DRAFT_1796at 1890.616 kb on + strand, within B158DRAFT_1796at 1890.619 kb on - strand, within B158DRAFT_1796at 1890.621 kb on + strand, within B158DRAFT_1796at 1890.629 kb on - strand, within B158DRAFT_1796at 1890.635 kb on + strand, within B158DRAFT_1796at 1890.648 kb on + strand, within B158DRAFT_1796at 1890.648 kb on + strand, within B158DRAFT_1796at 1890.820 kb on - strand, within B158DRAFT_1796at 1890.869 kb on + strand, within B158DRAFT_1796at 1890.884 kb on + strandat 1890.884 kb on + strandat 1890.884 kb on + strandat 1890.884 kb on + strandat 1890.892 kb on - strandat 1890.930 kb on + strandat 1890.931 kb on - strandat 1890.945 kb on + strandat 1890.945 kb on + strandat 1890.953 kb on - strandat 1890.962 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.031 kb on + strandat 1891.034 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.039 kb on - strandat 1891.041 kb on + strandat 1891.049 kb on - strandat 1891.051 kb on - strandat 1891.051 kb on - strandat 1891.090 kb on + strandat 1891.097 kb on + strandat 1891.112 kb on - strandat 1891.122 kb on - strandat 1891.183 kb on + strandat 1891.183 kb on + strandat 1891.191 kb on - strandat 1891.191 kb on - strandat 1891.223 kb on + strandat 1891.223 kb on + strandat 1891.223 kb on + strandat 1891.235 kb on + strandat 1891.290 kb on + strandat 1891.290 kb on + strandat 1891.290 kb on + strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.298 kb on - strandat 1891.305 kb on + strandat 1891.305 kb on + strandat 1891.305 kb on + strandat 1891.313 kb on - strandat 1891.313 kb on - strandat 1891.313 kb on - strandat 1891.343 kb on + strand, within B158DRAFT_1797at 1891.343 kb on + strand, within B158DRAFT_1797at 1891.343 kb on + strand, within B158DRAFT_1797at 1891.351 kb on - strand, within B158DRAFT_1797at 1891.351 kb on - strand, within B158DRAFT_1797at 1891.351 kb on - strand, within B158DRAFT_1797at 1891.392 kb on + strand, within B158DRAFT_1797at 1891.409 kb on - strand, within B158DRAFT_1797at 1891.414 kb on + strand, within B158DRAFT_1797at 1891.422 kb on - strand, within B158DRAFT_1797at 1891.479 kb on - strand, within B158DRAFT_1797at 1891.504 kb on + strand, within B158DRAFT_1797at 1891.512 kb on - strand, within B158DRAFT_1797at 1891.577 kb on - strand, within B158DRAFT_1797at 1891.600 kb on - strand, within B158DRAFT_1797at 1891.600 kb on - strand, within B158DRAFT_1797at 1891.600 kb on - strand, within B158DRAFT_1797at 1891.600 kb on - strand, within B158DRAFT_1797at 1891.605 kb on - strand, within B158DRAFT_1797at 1891.612 kb on + strand, within B158DRAFT_1797at 1891.671 kb on + strand, within B158DRAFT_1797at 1891.721 kb on - strand, within B158DRAFT_1797at 1891.732 kb on + strand, within B158DRAFT_1797at 1891.732 kb on + strand, within B158DRAFT_1797at 1891.740 kb on - strand, within B158DRAFT_1797at 1891.828 kb on + strand, within B158DRAFT_1797at 1891.828 kb on + strand, within B158DRAFT_1797at 1891.852 kb on + strand, within B158DRAFT_1797at 1891.865 kb on + strand, within B158DRAFT_1797at 1891.873 kb on + strand, within B158DRAFT_1797

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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1,888,802 + B158DRAFT_1795 0.12 +1.4
1,888,824 + B158DRAFT_1795 0.14 +1.9
1,888,832 - B158DRAFT_1795 0.15 +0.9
1,888,918 - B158DRAFT_1795 0.25 -2.8
1,888,939 + B158DRAFT_1795 0.27 +0.2
1,888,939 + B158DRAFT_1795 0.27 -1.6
1,888,939 + B158DRAFT_1795 0.27 -0.8
1,888,939 + B158DRAFT_1795 0.27 -0.6
1,888,949 + B158DRAFT_1795 0.28 -0.7
1,888,952 - B158DRAFT_1795 0.29 +4.6
1,888,959 - B158DRAFT_1795 0.29 -0.6
1,888,959 - B158DRAFT_1795 0.29 -1.7
1,888,966 - B158DRAFT_1795 0.30 +2.2
1,888,970 + B158DRAFT_1795 0.31 +0.7
1,888,973 - B158DRAFT_1795 0.31 +0.2
1,888,983 - B158DRAFT_1795 0.32 -0.5
1,888,989 - B158DRAFT_1795 0.33 +0.4
1,889,039 - B158DRAFT_1795 0.38 -0.7
1,889,055 + B158DRAFT_1795 0.40 +0.2
1,889,057 - B158DRAFT_1795 0.40 +3.0
1,889,057 - B158DRAFT_1795 0.40 -1.7
1,889,100 - B158DRAFT_1795 0.45 +0.3
1,889,125 + B158DRAFT_1795 0.48 -2.0
1,889,132 + B158DRAFT_1795 0.49 +0.2
1,889,133 - B158DRAFT_1795 0.49 -1.0
1,889,137 + B158DRAFT_1795 0.49 +2.1
1,889,137 + B158DRAFT_1795 0.49 -1.8
1,889,137 + B158DRAFT_1795 0.49 +0.1
1,889,137 + B158DRAFT_1795 0.49 -0.9
1,889,137 + B158DRAFT_1795 0.49 +1.6
1,889,140 - B158DRAFT_1795 0.50 -0.4
1,889,145 - B158DRAFT_1795 0.50 -0.6
1,889,145 - B158DRAFT_1795 0.50 -0.2
1,889,254 + B158DRAFT_1795 0.62 -1.5
1,889,305 + B158DRAFT_1795 0.68 -1.7
1,889,355 + B158DRAFT_1795 0.73 -1.9
1,889,355 + B158DRAFT_1795 0.73 -1.1
1,889,355 + B158DRAFT_1795 0.73 -0.4
1,889,355 + B158DRAFT_1795 0.73 -1.0
1,889,586 + -0.7
1,889,662 - +1.4
1,889,805 + -1.6
1,889,829 - +0.1
1,889,839 - -0.1
1,889,842 + +0.6
1,889,847 + +0.6
1,889,850 - -0.9
1,889,850 - +1.5
1,889,855 - +0.9
1,889,866 - +0.1
1,889,948 + B158DRAFT_1796 0.14 -1.4
1,889,951 - B158DRAFT_1796 0.15 +0.2
1,889,953 + B158DRAFT_1796 0.15 -1.4
1,889,953 + B158DRAFT_1796 0.15 -1.5
1,889,953 + B158DRAFT_1796 0.15 +0.9
1,889,961 - B158DRAFT_1796 0.15 -0.3
1,889,961 - B158DRAFT_1796 0.15 -0.9
1,889,961 - B158DRAFT_1796 0.15 -1.1
1,889,961 - B158DRAFT_1796 0.15 -0.1
1,889,961 - B158DRAFT_1796 0.15 +0.5
1,889,985 - B158DRAFT_1796 0.17 -0.2
1,889,997 + B158DRAFT_1796 0.18 -0.7
1,889,997 - B158DRAFT_1796 0.18 -0.1
1,890,077 + B158DRAFT_1796 0.25 +1.4
1,890,143 + B158DRAFT_1796 0.30 -0.4
1,890,143 + B158DRAFT_1796 0.30 -1.7
1,890,143 + B158DRAFT_1796 0.30 -0.3
1,890,151 - B158DRAFT_1796 0.31 +2.4
1,890,151 - B158DRAFT_1796 0.31 +0.1
1,890,151 - B158DRAFT_1796 0.31 -1.7
1,890,182 + B158DRAFT_1796 0.33 -0.4
1,890,192 + B158DRAFT_1796 0.34 -1.1
1,890,200 - B158DRAFT_1796 0.35 +1.2
1,890,225 + B158DRAFT_1796 0.37 +0.6
1,890,227 + B158DRAFT_1796 0.37 -0.1
1,890,227 + B158DRAFT_1796 0.37 -0.8
1,890,227 + B158DRAFT_1796 0.37 +1.1
1,890,233 - B158DRAFT_1796 0.38 -0.6
1,890,233 - B158DRAFT_1796 0.38 +1.4
1,890,235 - B158DRAFT_1796 0.38 +1.9
1,890,235 - B158DRAFT_1796 0.38 +1.2
1,890,285 - B158DRAFT_1796 0.42 +0.5
1,890,337 + B158DRAFT_1796 0.46 -0.4
1,890,367 + B158DRAFT_1796 0.49 +1.7
1,890,373 + B158DRAFT_1796 0.49 -0.3
1,890,405 + B158DRAFT_1796 0.52 -1.1
1,890,429 + B158DRAFT_1796 0.54 -1.1
1,890,437 - B158DRAFT_1796 0.54 -0.6
1,890,437 - B158DRAFT_1796 0.54 -1.0
1,890,439 + B158DRAFT_1796 0.55 -0.3
1,890,439 + B158DRAFT_1796 0.55 -0.8
1,890,439 + B158DRAFT_1796 0.55 +0.1
1,890,439 + B158DRAFT_1796 0.55 -0.4
1,890,439 + B158DRAFT_1796 0.55 -0.6
1,890,447 - B158DRAFT_1796 0.55 -1.2
1,890,447 - B158DRAFT_1796 0.55 +0.8
1,890,519 + B158DRAFT_1796 0.61 -0.1
1,890,520 + B158DRAFT_1796 0.61 -1.0
1,890,527 - B158DRAFT_1796 0.62 -1.7
1,890,536 + B158DRAFT_1796 0.63 -0.4
1,890,544 - B158DRAFT_1796 0.63 -1.3
1,890,587 + B158DRAFT_1796 0.67 -1.8
1,890,614 - B158DRAFT_1796 0.69 -1.8
1,890,616 + B158DRAFT_1796 0.69 -0.6
1,890,619 - B158DRAFT_1796 0.69 -0.7
1,890,621 + B158DRAFT_1796 0.70 -0.1
1,890,629 - B158DRAFT_1796 0.70 -1.6
1,890,635 + B158DRAFT_1796 0.71 -1.2
1,890,648 + B158DRAFT_1796 0.72 -2.2
1,890,648 + B158DRAFT_1796 0.72 -0.7
1,890,820 - B158DRAFT_1796 0.86 -1.2
1,890,869 + B158DRAFT_1796 0.90 +0.3
1,890,884 + -0.2
1,890,884 + -1.6
1,890,884 + +0.7
1,890,884 + -0.9
1,890,892 - -0.8
1,890,930 + -2.9
1,890,931 - -0.4
1,890,945 + +0.1
1,890,945 + +1.4
1,890,953 - -1.6
1,890,962 + -1.8
1,891,031 + +0.6
1,891,031 + -1.0
1,891,031 + -1.7
1,891,031 + -1.0
1,891,031 + -0.7
1,891,031 + -2.3
1,891,031 + +1.0
1,891,031 + +0.4
1,891,031 + -0.6
1,891,034 - +0.1
1,891,039 - -0.5
1,891,039 - -0.0
1,891,039 - -2.1
1,891,039 - -0.9
1,891,039 - -0.5
1,891,039 - +0.3
1,891,039 - +1.9
1,891,039 - -0.7
1,891,039 - -2.1
1,891,039 - +1.4
1,891,041 + -0.7
1,891,049 - -0.7
1,891,051 - +0.9
1,891,051 - -0.6
1,891,090 + -0.1
1,891,097 + -1.4
1,891,112 - +1.4
1,891,122 - -2.0
1,891,183 + -2.0
1,891,183 + +0.1
1,891,191 - -1.0
1,891,191 - +1.4
1,891,223 + -0.8
1,891,223 + -1.5
1,891,223 + -2.9
1,891,235 + -0.4
1,891,290 + -0.3
1,891,290 + -1.8
1,891,290 + -2.0
1,891,298 - -1.8
1,891,298 - -0.9
1,891,298 - -1.4
1,891,298 - -0.6
1,891,298 - -0.7
1,891,298 - +1.2
1,891,298 - -1.4
1,891,298 - +3.3
1,891,298 - +0.0
1,891,298 - -1.6
1,891,305 + -0.1
1,891,305 + +3.5
1,891,305 + -0.6
1,891,313 - -3.2
1,891,313 - -1.2
1,891,313 - +0.7
1,891,343 + B158DRAFT_1797 0.10 -1.0
1,891,343 + B158DRAFT_1797 0.10 +1.2
1,891,343 + B158DRAFT_1797 0.10 -0.3
1,891,351 - B158DRAFT_1797 0.11 +0.9
1,891,351 - B158DRAFT_1797 0.11 +0.1
1,891,351 - B158DRAFT_1797 0.11 -0.2
1,891,392 + B158DRAFT_1797 0.13 +0.2
1,891,409 - B158DRAFT_1797 0.14 +0.0
1,891,414 + B158DRAFT_1797 0.14 -1.1
1,891,422 - B158DRAFT_1797 0.15 -0.4
1,891,479 - B158DRAFT_1797 0.18 -1.0
1,891,504 + B158DRAFT_1797 0.19 -1.3
1,891,512 - B158DRAFT_1797 0.19 +0.1
1,891,577 - B158DRAFT_1797 0.23 -0.7
1,891,600 - B158DRAFT_1797 0.24 -0.2
1,891,600 - B158DRAFT_1797 0.24 -0.9
1,891,600 - B158DRAFT_1797 0.24 -0.1
1,891,600 - B158DRAFT_1797 0.24 -0.2
1,891,605 - B158DRAFT_1797 0.24 +0.0
1,891,612 + B158DRAFT_1797 0.25 -1.7
1,891,671 + B158DRAFT_1797 0.28 -0.4
1,891,721 - B158DRAFT_1797 0.31 -0.9
1,891,732 + B158DRAFT_1797 0.31 -1.2
1,891,732 + B158DRAFT_1797 0.31 -0.6
1,891,740 - B158DRAFT_1797 0.32 +0.8
1,891,828 + B158DRAFT_1797 0.36 +3.0
1,891,828 + B158DRAFT_1797 0.36 -0.9
1,891,852 + B158DRAFT_1797 0.38 -1.4
1,891,865 + B158DRAFT_1797 0.38 +0.3
1,891,873 + B158DRAFT_1797 0.39 +0.7

Or see this region's nucleotide sequence