Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1744

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1743 and B158DRAFT_1744 are separated by 184 nucleotidesB158DRAFT_1744 and B158DRAFT_1745 are separated by 51 nucleotidesB158DRAFT_1745 and B158DRAFT_1746 are separated by 27 nucleotides B158DRAFT_1743: B158DRAFT_1743 - Subtilisin-like serine proteases, at 1,824,109 to 1,826,169 _1743 B158DRAFT_1744: B158DRAFT_1744 - Predicted Zn-dependent peptidases, at 1,826,354 to 1,829,209 _1744 B158DRAFT_1745: B158DRAFT_1745 - hydrolase, TatD family, at 1,829,261 to 1,830,055 _1745 B158DRAFT_1746: B158DRAFT_1746 - Tfp pilus assembly protein PilZ, at 1,830,083 to 1,830,433 _1746 Position (kb) 1826 1827 1828 1829 1830Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1825.402 kb on + strand, within B158DRAFT_1743at 1825.407 kb on + strand, within B158DRAFT_1743at 1825.434 kb on - strand, within B158DRAFT_1743at 1825.501 kb on + strand, within B158DRAFT_1743at 1825.567 kb on + strand, within B158DRAFT_1743at 1825.584 kb on + strand, within B158DRAFT_1743at 1825.632 kb on - strand, within B158DRAFT_1743at 1825.648 kb on + strand, within B158DRAFT_1743at 1825.648 kb on + strand, within B158DRAFT_1743at 1825.648 kb on + strand, within B158DRAFT_1743at 1825.648 kb on + strand, within B158DRAFT_1743at 1825.648 kb on + strand, within B158DRAFT_1743at 1825.656 kb on - strand, within B158DRAFT_1743at 1825.656 kb on - strand, within B158DRAFT_1743at 1825.656 kb on - strand, within B158DRAFT_1743at 1825.679 kb on - strand, within B158DRAFT_1743at 1825.738 kb on + strand, within B158DRAFT_1743at 1825.738 kb on + strand, within B158DRAFT_1743at 1825.738 kb on - strand, within B158DRAFT_1743at 1825.746 kb on - strand, within B158DRAFT_1743at 1825.771 kb on + strand, within B158DRAFT_1743at 1825.781 kb on + strand, within B158DRAFT_1743at 1825.878 kb on + strand, within B158DRAFT_1743at 1825.907 kb on + strand, within B158DRAFT_1743at 1825.944 kb on - strand, within B158DRAFT_1743at 1825.944 kb on - strand, within B158DRAFT_1743at 1825.960 kb on - strand, within B158DRAFT_1743at 1825.999 kb on - strandat 1826.030 kb on - strandat 1826.079 kb on - strandat 1826.090 kb on - strandat 1826.170 kb on + strandat 1826.222 kb on + strandat 1826.225 kb on - strandat 1826.255 kb on + strandat 1826.415 kb on + strandat 1826.417 kb on + strandat 1826.417 kb on + strandat 1826.423 kb on - strandat 1826.451 kb on - strandat 1826.453 kb on + strandat 1826.514 kb on + strandat 1826.520 kb on + strandat 1826.520 kb on + strandat 1826.522 kb on - strandat 1826.522 kb on - strandat 1826.528 kb on - strandat 1826.729 kb on - strand, within B158DRAFT_1744at 1826.761 kb on + strand, within B158DRAFT_1744at 1826.774 kb on + strand, within B158DRAFT_1744at 1826.782 kb on - strand, within B158DRAFT_1744at 1826.804 kb on + strand, within B158DRAFT_1744at 1826.805 kb on + strand, within B158DRAFT_1744at 1826.805 kb on + strand, within B158DRAFT_1744at 1826.805 kb on + strand, within B158DRAFT_1744at 1826.805 kb on + strand, within B158DRAFT_1744at 1826.805 kb on + strand, within B158DRAFT_1744at 1826.812 kb on - strand, within B158DRAFT_1744at 1826.813 kb on - strand, within B158DRAFT_1744at 1826.813 kb on - strand, within B158DRAFT_1744at 1826.867 kb on + strand, within B158DRAFT_1744at 1826.870 kb on - strand, within B158DRAFT_1744at 1826.918 kb on - strand, within B158DRAFT_1744at 1826.918 kb on - strand, within B158DRAFT_1744at 1827.025 kb on + strand, within B158DRAFT_1744at 1827.141 kb on + strand, within B158DRAFT_1744at 1827.183 kb on - strand, within B158DRAFT_1744at 1827.277 kb on + strand, within B158DRAFT_1744at 1827.277 kb on + strand, within B158DRAFT_1744at 1827.277 kb on + strand, within B158DRAFT_1744at 1827.300 kb on + strand, within B158DRAFT_1744at 1827.300 kb on + strand, within B158DRAFT_1744at 1827.300 kb on + strand, within B158DRAFT_1744at 1827.300 kb on + strand, within B158DRAFT_1744at 1827.300 kb on + strand, within B158DRAFT_1744at 1827.300 kb on + strand, within B158DRAFT_1744at 1827.308 kb on - strand, within B158DRAFT_1744at 1827.308 kb on - strand, within B158DRAFT_1744at 1827.308 kb on - strand, within B158DRAFT_1744at 1827.308 kb on - strand, within B158DRAFT_1744at 1827.392 kb on + strand, within B158DRAFT_1744at 1827.400 kb on - strand, within B158DRAFT_1744at 1827.536 kb on + strand, within B158DRAFT_1744at 1827.539 kb on - strand, within B158DRAFT_1744at 1827.544 kb on - strand, within B158DRAFT_1744at 1827.544 kb on - strand, within B158DRAFT_1744at 1827.844 kb on + strand, within B158DRAFT_1744at 1827.852 kb on - strand, within B158DRAFT_1744at 1827.866 kb on + strand, within B158DRAFT_1744at 1827.874 kb on - strand, within B158DRAFT_1744at 1827.913 kb on - strand, within B158DRAFT_1744at 1828.047 kb on + strand, within B158DRAFT_1744at 1828.047 kb on + strand, within B158DRAFT_1744at 1828.143 kb on - strand, within B158DRAFT_1744at 1828.143 kb on - strand, within B158DRAFT_1744at 1828.204 kb on - strand, within B158DRAFT_1744at 1828.247 kb on + strand, within B158DRAFT_1744at 1828.247 kb on + strand, within B158DRAFT_1744at 1828.321 kb on + strand, within B158DRAFT_1744at 1828.321 kb on + strand, within B158DRAFT_1744at 1828.435 kb on + strand, within B158DRAFT_1744at 1828.578 kb on + strand, within B158DRAFT_1744at 1828.640 kb on - strand, within B158DRAFT_1744at 1828.660 kb on + strand, within B158DRAFT_1744at 1828.660 kb on + strand, within B158DRAFT_1744at 1828.668 kb on - strand, within B158DRAFT_1744at 1828.827 kb on - strand, within B158DRAFT_1744at 1828.836 kb on - strand, within B158DRAFT_1744at 1828.868 kb on + strand, within B158DRAFT_1744at 1828.868 kb on + strand, within B158DRAFT_1744at 1828.876 kb on - strand, within B158DRAFT_1744at 1828.884 kb on + strand, within B158DRAFT_1744at 1828.900 kb on - strand, within B158DRAFT_1744at 1829.025 kb on + strandat 1829.025 kb on + strandat 1829.223 kb on - strandat 1829.345 kb on + strand, within B158DRAFT_1745at 1829.353 kb on - strand, within B158DRAFT_1745at 1829.482 kb on - strand, within B158DRAFT_1745at 1829.543 kb on + strand, within B158DRAFT_1745at 1829.551 kb on - strand, within B158DRAFT_1745at 1829.575 kb on + strand, within B158DRAFT_1745at 1829.575 kb on + strand, within B158DRAFT_1745at 1829.575 kb on + strand, within B158DRAFT_1745at 1829.583 kb on - strand, within B158DRAFT_1745at 1829.583 kb on - strand, within B158DRAFT_1745at 1829.585 kb on + strand, within B158DRAFT_1745at 1829.585 kb on + strand, within B158DRAFT_1745at 1829.593 kb on - strand, within B158DRAFT_1745at 1829.593 kb on - strand, within B158DRAFT_1745at 1829.593 kb on - strand, within B158DRAFT_1745at 1829.593 kb on - strand, within B158DRAFT_1745at 1829.593 kb on - strand, within B158DRAFT_1745at 1829.647 kb on - strand, within B158DRAFT_1745at 1829.657 kb on + strand, within B158DRAFT_1745at 1829.657 kb on + strand, within B158DRAFT_1745at 1829.765 kb on - strand, within B158DRAFT_1745at 1829.790 kb on + strand, within B158DRAFT_1745at 1829.822 kb on + strand, within B158DRAFT_1745at 1829.829 kb on - strand, within B158DRAFT_1745at 1829.850 kb on - strand, within B158DRAFT_1745at 1829.869 kb on - strand, within B158DRAFT_1745at 1829.919 kb on + strand, within B158DRAFT_1745at 1829.919 kb on + strand, within B158DRAFT_1745at 1829.927 kb on - strand, within B158DRAFT_1745at 1829.937 kb on - strand, within B158DRAFT_1745at 1829.937 kb on - strand, within B158DRAFT_1745at 1829.951 kb on - strand, within B158DRAFT_1745at 1829.953 kb on + strand, within B158DRAFT_1745at 1829.978 kb on + strandat 1829.978 kb on + strandat 1829.985 kb on + strandat 1830.016 kb on + strandat 1830.016 kb on + strandat 1830.024 kb on - strandat 1830.028 kb on + strandat 1830.046 kb on - strandat 1830.080 kb on + strandat 1830.088 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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1,825,402 + B158DRAFT_1743 0.63 -0.4
1,825,407 + B158DRAFT_1743 0.63 +0.7
1,825,434 - B158DRAFT_1743 0.64 +1.5
1,825,501 + B158DRAFT_1743 0.68 -1.3
1,825,567 + B158DRAFT_1743 0.71 -1.5
1,825,584 + B158DRAFT_1743 0.72 +1.3
1,825,632 - B158DRAFT_1743 0.74 -0.6
1,825,648 + B158DRAFT_1743 0.75 +0.9
1,825,648 + B158DRAFT_1743 0.75 -0.4
1,825,648 + B158DRAFT_1743 0.75 -0.8
1,825,648 + B158DRAFT_1743 0.75 +0.8
1,825,648 + B158DRAFT_1743 0.75 -1.6
1,825,656 - B158DRAFT_1743 0.75 -0.5
1,825,656 - B158DRAFT_1743 0.75 -1.1
1,825,656 - B158DRAFT_1743 0.75 -0.3
1,825,679 - B158DRAFT_1743 0.76 -1.0
1,825,738 + B158DRAFT_1743 0.79 -1.1
1,825,738 + B158DRAFT_1743 0.79 -1.0
1,825,738 - B158DRAFT_1743 0.79 +0.0
1,825,746 - B158DRAFT_1743 0.79 -0.7
1,825,771 + B158DRAFT_1743 0.81 -1.0
1,825,781 + B158DRAFT_1743 0.81 -0.1
1,825,878 + B158DRAFT_1743 0.86 -0.1
1,825,907 + B158DRAFT_1743 0.87 +0.4
1,825,944 - B158DRAFT_1743 0.89 +0.3
1,825,944 - B158DRAFT_1743 0.89 -1.4
1,825,960 - B158DRAFT_1743 0.90 -1.7
1,825,999 - +0.9
1,826,030 - -1.5
1,826,079 - -1.1
1,826,090 - +0.5
1,826,170 + +0.9
1,826,222 + +0.8
1,826,225 - +0.9
1,826,255 + -0.5
1,826,415 + -0.0
1,826,417 + -1.5
1,826,417 + +1.4
1,826,423 - +0.8
1,826,451 - -1.8
1,826,453 + +0.9
1,826,514 + -0.1
1,826,520 + +0.4
1,826,520 + -0.6
1,826,522 - +0.2
1,826,522 - -0.8
1,826,528 - +0.1
1,826,729 - B158DRAFT_1744 0.13 +0.4
1,826,761 + B158DRAFT_1744 0.14 -1.3
1,826,774 + B158DRAFT_1744 0.15 -1.0
1,826,782 - B158DRAFT_1744 0.15 -0.7
1,826,804 + B158DRAFT_1744 0.16 -2.5
1,826,805 + B158DRAFT_1744 0.16 +0.7
1,826,805 + B158DRAFT_1744 0.16 +0.8
1,826,805 + B158DRAFT_1744 0.16 -1.2
1,826,805 + B158DRAFT_1744 0.16 -0.8
1,826,805 + B158DRAFT_1744 0.16 +0.4
1,826,812 - B158DRAFT_1744 0.16 -1.6
1,826,813 - B158DRAFT_1744 0.16 -0.2
1,826,813 - B158DRAFT_1744 0.16 +1.3
1,826,867 + B158DRAFT_1744 0.18 +0.6
1,826,870 - B158DRAFT_1744 0.18 -2.1
1,826,918 - B158DRAFT_1744 0.20 -2.1
1,826,918 - B158DRAFT_1744 0.20 +0.7
1,827,025 + B158DRAFT_1744 0.23 +0.6
1,827,141 + B158DRAFT_1744 0.28 +1.6
1,827,183 - B158DRAFT_1744 0.29 +3.0
1,827,277 + B158DRAFT_1744 0.32 +1.2
1,827,277 + B158DRAFT_1744 0.32 +2.5
1,827,277 + B158DRAFT_1744 0.32 +1.4
1,827,300 + B158DRAFT_1744 0.33 +1.7
1,827,300 + B158DRAFT_1744 0.33 -0.7
1,827,300 + B158DRAFT_1744 0.33 -1.3
1,827,300 + B158DRAFT_1744 0.33 -1.1
1,827,300 + B158DRAFT_1744 0.33 -0.7
1,827,300 + B158DRAFT_1744 0.33 -0.8
1,827,308 - B158DRAFT_1744 0.33 -1.3
1,827,308 - B158DRAFT_1744 0.33 +0.9
1,827,308 - B158DRAFT_1744 0.33 +0.2
1,827,308 - B158DRAFT_1744 0.33 +0.0
1,827,392 + B158DRAFT_1744 0.36 -2.6
1,827,400 - B158DRAFT_1744 0.37 +0.3
1,827,536 + B158DRAFT_1744 0.41 -0.0
1,827,539 - B158DRAFT_1744 0.41 +0.7
1,827,544 - B158DRAFT_1744 0.42 -2.7
1,827,544 - B158DRAFT_1744 0.42 +3.4
1,827,844 + B158DRAFT_1744 0.52 +1.4
1,827,852 - B158DRAFT_1744 0.52 -0.2
1,827,866 + B158DRAFT_1744 0.53 +0.1
1,827,874 - B158DRAFT_1744 0.53 -1.2
1,827,913 - B158DRAFT_1744 0.55 -1.7
1,828,047 + B158DRAFT_1744 0.59 -1.6
1,828,047 + B158DRAFT_1744 0.59 -0.1
1,828,143 - B158DRAFT_1744 0.63 -0.4
1,828,143 - B158DRAFT_1744 0.63 -0.2
1,828,204 - B158DRAFT_1744 0.65 -0.3
1,828,247 + B158DRAFT_1744 0.66 +0.4
1,828,247 + B158DRAFT_1744 0.66 -1.3
1,828,321 + B158DRAFT_1744 0.69 +0.8
1,828,321 + B158DRAFT_1744 0.69 -0.3
1,828,435 + B158DRAFT_1744 0.73 -0.4
1,828,578 + B158DRAFT_1744 0.78 -1.2
1,828,640 - B158DRAFT_1744 0.80 -1.4
1,828,660 + B158DRAFT_1744 0.81 -2.0
1,828,660 + B158DRAFT_1744 0.81 +0.2
1,828,668 - B158DRAFT_1744 0.81 +0.6
1,828,827 - B158DRAFT_1744 0.87 -1.5
1,828,836 - B158DRAFT_1744 0.87 +0.5
1,828,868 + B158DRAFT_1744 0.88 -0.8
1,828,868 + B158DRAFT_1744 0.88 +0.4
1,828,876 - B158DRAFT_1744 0.88 +0.4
1,828,884 + B158DRAFT_1744 0.89 -1.2
1,828,900 - B158DRAFT_1744 0.89 +0.5
1,829,025 + -2.0
1,829,025 + +0.2
1,829,223 - -0.7
1,829,345 + B158DRAFT_1745 0.11 -0.8
1,829,353 - B158DRAFT_1745 0.12 -0.8
1,829,482 - B158DRAFT_1745 0.28 -0.8
1,829,543 + B158DRAFT_1745 0.35 -0.7
1,829,551 - B158DRAFT_1745 0.36 +0.0
1,829,575 + B158DRAFT_1745 0.39 -0.8
1,829,575 + B158DRAFT_1745 0.39 -0.4
1,829,575 + B158DRAFT_1745 0.39 -0.5
1,829,583 - B158DRAFT_1745 0.41 -1.3
1,829,583 - B158DRAFT_1745 0.41 -0.3
1,829,585 + B158DRAFT_1745 0.41 +1.0
1,829,585 + B158DRAFT_1745 0.41 -1.4
1,829,593 - B158DRAFT_1745 0.42 +0.7
1,829,593 - B158DRAFT_1745 0.42 +0.7
1,829,593 - B158DRAFT_1745 0.42 -0.1
1,829,593 - B158DRAFT_1745 0.42 +2.1
1,829,593 - B158DRAFT_1745 0.42 +0.3
1,829,647 - B158DRAFT_1745 0.49 +0.1
1,829,657 + B158DRAFT_1745 0.50 -0.7
1,829,657 + B158DRAFT_1745 0.50 +0.3
1,829,765 - B158DRAFT_1745 0.63 +1.1
1,829,790 + B158DRAFT_1745 0.67 -0.9
1,829,822 + B158DRAFT_1745 0.71 -1.0
1,829,829 - B158DRAFT_1745 0.71 -0.8
1,829,850 - B158DRAFT_1745 0.74 -1.2
1,829,869 - B158DRAFT_1745 0.76 +0.9
1,829,919 + B158DRAFT_1745 0.83 -1.5
1,829,919 + B158DRAFT_1745 0.83 -0.8
1,829,927 - B158DRAFT_1745 0.84 -1.6
1,829,937 - B158DRAFT_1745 0.85 -1.3
1,829,937 - B158DRAFT_1745 0.85 +0.0
1,829,951 - B158DRAFT_1745 0.87 -1.6
1,829,953 + B158DRAFT_1745 0.87 +0.4
1,829,978 + -2.4
1,829,978 + +0.3
1,829,985 + -1.6
1,830,016 + +0.2
1,830,016 + -1.6
1,830,024 - +0.3
1,830,028 + -3.5
1,830,046 - -0.2
1,830,080 + -0.8
1,830,088 - +0.3

Or see this region's nucleotide sequence