Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1572 and B158DRAFT_1573 are separated by 125 nucleotides B158DRAFT_1573 and B158DRAFT_1574 are separated by 44 nucleotides
B158DRAFT_1572: B158DRAFT_1572 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 1,631,038 to 1,631,904
_1572
B158DRAFT_1573: B158DRAFT_1573 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 1,632,030 to 1,633,688
_1573
B158DRAFT_1574: B158DRAFT_1574 - ribonuclease D, at 1,633,733 to 1,634,887
_1574
Position (kb)
1632
1633
1634 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 1631.043 kb on + strand at 1631.051 kb on - strand at 1631.095 kb on + strand at 1631.095 kb on + strand at 1631.103 kb on - strand at 1631.112 kb on + strand at 1631.132 kb on - strand, within B158DRAFT_1572 at 1631.143 kb on - strand, within B158DRAFT_1572 at 1631.236 kb on - strand, within B158DRAFT_1572 at 1631.275 kb on + strand, within B158DRAFT_1572 at 1631.275 kb on + strand, within B158DRAFT_1572 at 1631.354 kb on + strand, within B158DRAFT_1572 at 1631.354 kb on + strand, within B158DRAFT_1572 at 1631.362 kb on - strand, within B158DRAFT_1572 at 1631.362 kb on - strand, within B158DRAFT_1572 at 1631.378 kb on - strand, within B158DRAFT_1572 at 1631.386 kb on + strand, within B158DRAFT_1572 at 1631.386 kb on + strand, within B158DRAFT_1572 at 1631.389 kb on - strand, within B158DRAFT_1572 at 1631.394 kb on - strand, within B158DRAFT_1572 at 1631.394 kb on - strand, within B158DRAFT_1572 at 1631.424 kb on + strand, within B158DRAFT_1572 at 1631.449 kb on + strand, within B158DRAFT_1572 at 1631.456 kb on + strand, within B158DRAFT_1572 at 1631.456 kb on + strand, within B158DRAFT_1572 at 1631.456 kb on + strand, within B158DRAFT_1572 at 1631.456 kb on + strand, within B158DRAFT_1572 at 1631.464 kb on - strand, within B158DRAFT_1572 at 1631.464 kb on - strand, within B158DRAFT_1572 at 1631.464 kb on - strand, within B158DRAFT_1572 at 1631.464 kb on - strand, within B158DRAFT_1572 at 1631.464 kb on - strand, within B158DRAFT_1572 at 1631.464 kb on - strand, within B158DRAFT_1572 at 1631.469 kb on + strand, within B158DRAFT_1572 at 1631.469 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on + strand, within B158DRAFT_1572 at 1631.477 kb on - strand, within B158DRAFT_1572 at 1631.485 kb on - strand, within B158DRAFT_1572 at 1631.485 kb on - strand, within B158DRAFT_1572 at 1631.485 kb on - strand, within B158DRAFT_1572 at 1631.485 kb on - strand, within B158DRAFT_1572 at 1631.485 kb on - strand, within B158DRAFT_1572 at 1631.487 kb on + strand, within B158DRAFT_1572 at 1631.487 kb on + strand, within B158DRAFT_1572 at 1631.487 kb on + strand, within B158DRAFT_1572 at 1631.487 kb on + strand, within B158DRAFT_1572 at 1631.487 kb on + strand, within B158DRAFT_1572 at 1631.487 kb on + strand, within B158DRAFT_1572 at 1631.487 kb on + strand, within B158DRAFT_1572 at 1631.495 kb on - strand, within B158DRAFT_1572 at 1631.495 kb on - strand, within B158DRAFT_1572 at 1631.495 kb on - strand, within B158DRAFT_1572 at 1631.495 kb on - strand, within B158DRAFT_1572 at 1631.549 kb on + strand, within B158DRAFT_1572 at 1631.551 kb on + strand, within B158DRAFT_1572 at 1631.551 kb on + strand, within B158DRAFT_1572 at 1631.551 kb on + strand, within B158DRAFT_1572 at 1631.551 kb on + strand, within B158DRAFT_1572 at 1631.557 kb on - strand, within B158DRAFT_1572 at 1631.557 kb on - strand, within B158DRAFT_1572 at 1631.559 kb on - strand, within B158DRAFT_1572 at 1631.565 kb on + strand, within B158DRAFT_1572 at 1631.572 kb on + strand, within B158DRAFT_1572 at 1631.572 kb on + strand, within B158DRAFT_1572 at 1631.572 kb on + strand, within B158DRAFT_1572 at 1631.572 kb on + strand, within B158DRAFT_1572 at 1631.573 kb on - strand, within B158DRAFT_1572 at 1631.611 kb on - strand, within B158DRAFT_1572 at 1631.646 kb on - strand, within B158DRAFT_1572 at 1631.748 kb on - strand, within B158DRAFT_1572 at 1631.750 kb on - strand, within B158DRAFT_1572 at 1631.798 kb on + strand, within B158DRAFT_1572 at 1631.807 kb on + strand, within B158DRAFT_1572 at 1631.830 kb on + strand at 1632.077 kb on + strand at 1632.077 kb on + strand at 1632.082 kb on + strand at 1632.085 kb on - strand at 1632.085 kb on - strand at 1632.087 kb on + strand at 1632.090 kb on - strand at 1632.090 kb on - strand at 1632.090 kb on - strand at 1632.090 kb on - strand at 1632.090 kb on - strand at 1632.100 kb on - strand at 1632.100 kb on - strand at 1632.150 kb on + strand at 1632.158 kb on - strand at 1632.170 kb on + strand at 1632.171 kb on + strand at 1632.171 kb on + strand at 1632.172 kb on + strand at 1632.172 kb on + strand at 1632.172 kb on + strand at 1632.179 kb on - strand at 1632.180 kb on - strand at 1632.180 kb on - strand at 1632.180 kb on - strand at 1632.251 kb on + strand, within B158DRAFT_1573 at 1632.258 kb on - strand, within B158DRAFT_1573 at 1632.324 kb on - strand, within B158DRAFT_1573 at 1632.332 kb on + strand, within B158DRAFT_1573 at 1632.475 kb on - strand, within B158DRAFT_1573 at 1632.486 kb on + strand, within B158DRAFT_1573 at 1632.490 kb on - strand, within B158DRAFT_1573 at 1632.504 kb on + strand, within B158DRAFT_1573 at 1632.511 kb on - strand, within B158DRAFT_1573 at 1632.583 kb on + strand, within B158DRAFT_1573 at 1632.591 kb on - strand, within B158DRAFT_1573 at 1632.620 kb on + strand, within B158DRAFT_1573 at 1632.640 kb on + strand, within B158DRAFT_1573 at 1632.640 kb on + strand, within B158DRAFT_1573 at 1632.648 kb on - strand, within B158DRAFT_1573 at 1632.648 kb on - strand, within B158DRAFT_1573 at 1632.668 kb on + strand, within B158DRAFT_1573 at 1632.679 kb on + strand, within B158DRAFT_1573 at 1632.687 kb on - strand, within B158DRAFT_1573 at 1632.687 kb on - strand, within B158DRAFT_1573 at 1632.687 kb on - strand, within B158DRAFT_1573 at 1632.710 kb on - strand, within B158DRAFT_1573 at 1632.748 kb on - strand, within B158DRAFT_1573 at 1632.844 kb on + strand, within B158DRAFT_1573 at 1632.933 kb on + strand, within B158DRAFT_1573 at 1632.968 kb on + strand, within B158DRAFT_1573 at 1632.971 kb on - strand, within B158DRAFT_1573 at 1632.976 kb on - strand, within B158DRAFT_1573 at 1632.976 kb on - strand, within B158DRAFT_1573 at 1633.036 kb on - strand, within B158DRAFT_1573 at 1633.036 kb on - strand, within B158DRAFT_1573 at 1633.038 kb on + strand, within B158DRAFT_1573 at 1633.038 kb on + strand, within B158DRAFT_1573 at 1633.038 kb on + strand, within B158DRAFT_1573 at 1633.038 kb on - strand, within B158DRAFT_1573 at 1633.038 kb on - strand, within B158DRAFT_1573 at 1633.038 kb on - strand, within B158DRAFT_1573 at 1633.096 kb on + strand, within B158DRAFT_1573 at 1633.096 kb on + strand, within B158DRAFT_1573 at 1633.096 kb on + strand, within B158DRAFT_1573 at 1633.096 kb on - strand, within B158DRAFT_1573 at 1633.164 kb on + strand, within B158DRAFT_1573 at 1633.214 kb on + strand, within B158DRAFT_1573 at 1633.247 kb on + strand, within B158DRAFT_1573 at 1633.276 kb on - strand, within B158DRAFT_1573 at 1633.432 kb on - strand, within B158DRAFT_1573 at 1633.569 kb on - strand at 1633.799 kb on - strand at 1633.827 kb on - strand at 1633.832 kb on - strand at 1633.838 kb on - strand at 1634.008 kb on - strand, within B158DRAFT_1574 at 1634.074 kb on - strand, within B158DRAFT_1574 at 1634.100 kb on + strand, within B158DRAFT_1574 at 1634.100 kb on + strand, within B158DRAFT_1574 at 1634.100 kb on + strand, within B158DRAFT_1574 at 1634.108 kb on - strand, within B158DRAFT_1574 at 1634.108 kb on - strand, within B158DRAFT_1574 at 1634.156 kb on - strand, within B158DRAFT_1574 at 1634.170 kb on + strand, within B158DRAFT_1574 at 1634.170 kb on + strand, within B158DRAFT_1574 at 1634.170 kb on + strand, within B158DRAFT_1574 at 1634.178 kb on - strand, within B158DRAFT_1574 at 1634.178 kb on - strand, within B158DRAFT_1574 at 1634.178 kb on - strand, within B158DRAFT_1574 at 1634.225 kb on + strand, within B158DRAFT_1574 at 1634.234 kb on + strand, within B158DRAFT_1574 at 1634.276 kb on - strand, within B158DRAFT_1574 at 1634.391 kb on + strand, within B158DRAFT_1574 at 1634.399 kb on - strand, within B158DRAFT_1574 at 1634.562 kb on - strand, within B158DRAFT_1574 at 1634.632 kb on - strand, within B158DRAFT_1574
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 1,631,043 + -1.5 1,631,051 - -0.1 1,631,095 + -0.5 1,631,095 + -0.7 1,631,103 - -1.0 1,631,112 + -1.2 1,631,132 - B158DRAFT_1572 0.11 -0.6 1,631,143 - B158DRAFT_1572 0.12 +2.3 1,631,236 - B158DRAFT_1572 0.23 -0.9 1,631,275 + B158DRAFT_1572 0.27 +0.7 1,631,275 + B158DRAFT_1572 0.27 -1.3 1,631,354 + B158DRAFT_1572 0.36 +1.0 1,631,354 + B158DRAFT_1572 0.36 +2.3 1,631,362 - B158DRAFT_1572 0.37 -1.0 1,631,362 - B158DRAFT_1572 0.37 -0.5 1,631,378 - B158DRAFT_1572 0.39 -0.6 1,631,386 + B158DRAFT_1572 0.40 -1.1 1,631,386 + B158DRAFT_1572 0.40 -0.9 1,631,389 - B158DRAFT_1572 0.40 -0.2 1,631,394 - B158DRAFT_1572 0.41 -1.8 1,631,394 - B158DRAFT_1572 0.41 -0.8 1,631,424 + B158DRAFT_1572 0.45 -1.0 1,631,449 + B158DRAFT_1572 0.47 +0.2 1,631,456 + B158DRAFT_1572 0.48 -1.8 1,631,456 + B158DRAFT_1572 0.48 +5.0 1,631,456 + B158DRAFT_1572 0.48 +1.7 1,631,456 + B158DRAFT_1572 0.48 +0.8 1,631,464 - B158DRAFT_1572 0.49 -1.1 1,631,464 - B158DRAFT_1572 0.49 -1.2 1,631,464 - B158DRAFT_1572 0.49 +0.5 1,631,464 - B158DRAFT_1572 0.49 -0.2 1,631,464 - B158DRAFT_1572 0.49 -0.4 1,631,464 - B158DRAFT_1572 0.49 +6.0 1,631,469 + B158DRAFT_1572 0.50 -0.4 1,631,469 + B158DRAFT_1572 0.50 -0.9 1,631,477 + B158DRAFT_1572 0.51 +1.2 1,631,477 + B158DRAFT_1572 0.51 -0.8 1,631,477 + B158DRAFT_1572 0.51 +0.6 1,631,477 + B158DRAFT_1572 0.51 -1.5 1,631,477 + B158DRAFT_1572 0.51 -0.3 1,631,477 + B158DRAFT_1572 0.51 -1.4 1,631,477 + B158DRAFT_1572 0.51 +3.3 1,631,477 - B158DRAFT_1572 0.51 -1.3 1,631,485 - B158DRAFT_1572 0.52 -1.0 1,631,485 - B158DRAFT_1572 0.52 +0.6 1,631,485 - B158DRAFT_1572 0.52 -0.3 1,631,485 - B158DRAFT_1572 0.52 -1.3 1,631,485 - B158DRAFT_1572 0.52 +1.0 1,631,487 + B158DRAFT_1572 0.52 -1.1 1,631,487 + B158DRAFT_1572 0.52 -2.9 1,631,487 + B158DRAFT_1572 0.52 -0.9 1,631,487 + B158DRAFT_1572 0.52 -0.4 1,631,487 + B158DRAFT_1572 0.52 +0.7 1,631,487 + B158DRAFT_1572 0.52 -0.5 1,631,487 + B158DRAFT_1572 0.52 -3.0 1,631,495 - B158DRAFT_1572 0.53 -1.4 1,631,495 - B158DRAFT_1572 0.53 -1.2 1,631,495 - B158DRAFT_1572 0.53 -0.3 1,631,495 - B158DRAFT_1572 0.53 -3.1 1,631,549 + B158DRAFT_1572 0.59 -1.0 1,631,551 + B158DRAFT_1572 0.59 -1.9 1,631,551 + B158DRAFT_1572 0.59 +4.7 1,631,551 + B158DRAFT_1572 0.59 -0.9 1,631,551 + B158DRAFT_1572 0.59 +0.1 1,631,557 - B158DRAFT_1572 0.60 -0.0 1,631,557 - B158DRAFT_1572 0.60 -2.8 1,631,559 - B158DRAFT_1572 0.60 +2.0 1,631,565 + B158DRAFT_1572 0.61 +0.6 1,631,572 + B158DRAFT_1572 0.62 +0.2 1,631,572 + B158DRAFT_1572 0.62 +0.7 1,631,572 + B158DRAFT_1572 0.62 -0.9 1,631,572 + B158DRAFT_1572 0.62 +1.7 1,631,573 - B158DRAFT_1572 0.62 -2.7 1,631,611 - B158DRAFT_1572 0.66 +0.0 1,631,646 - B158DRAFT_1572 0.70 +0.2 1,631,748 - B158DRAFT_1572 0.82 -0.6 1,631,750 - B158DRAFT_1572 0.82 +0.1 1,631,798 + B158DRAFT_1572 0.88 +1.9 1,631,807 + B158DRAFT_1572 0.89 +0.1 1,631,830 + -1.7 1,632,077 + -1.5 1,632,077 + -2.8 1,632,082 + -0.7 1,632,085 - +0.4 1,632,085 - -1.0 1,632,087 + -1.4 1,632,090 - -1.8 1,632,090 - +0.5 1,632,090 - +0.0 1,632,090 - -1.6 1,632,090 - -1.7 1,632,100 - -2.1 1,632,100 - -0.3 1,632,150 + +0.9 1,632,158 - -2.5 1,632,170 + +0.2 1,632,171 + -2.1 1,632,171 + -1.8 1,632,172 + -0.4 1,632,172 + +0.2 1,632,172 + -1.3 1,632,179 - -0.5 1,632,180 - -2.7 1,632,180 - +0.2 1,632,180 - -0.3 1,632,251 + B158DRAFT_1573 0.13 -0.7 1,632,258 - B158DRAFT_1573 0.14 -1.5 1,632,324 - B158DRAFT_1573 0.18 -0.4 1,632,332 + B158DRAFT_1573 0.18 -1.1 1,632,475 - B158DRAFT_1573 0.27 -1.7 1,632,486 + B158DRAFT_1573 0.27 -1.5 1,632,490 - B158DRAFT_1573 0.28 +0.4 1,632,504 + B158DRAFT_1573 0.29 -0.6 1,632,511 - B158DRAFT_1573 0.29 +2.2 1,632,583 + B158DRAFT_1573 0.33 -0.7 1,632,591 - B158DRAFT_1573 0.34 -1.7 1,632,620 + B158DRAFT_1573 0.36 -1.3 1,632,640 + B158DRAFT_1573 0.37 -2.0 1,632,640 + B158DRAFT_1573 0.37 -0.4 1,632,648 - B158DRAFT_1573 0.37 -1.1 1,632,648 - B158DRAFT_1573 0.37 +0.8 1,632,668 + B158DRAFT_1573 0.38 -0.0 1,632,679 + B158DRAFT_1573 0.39 -1.4 1,632,687 - B158DRAFT_1573 0.40 -0.4 1,632,687 - B158DRAFT_1573 0.40 -0.3 1,632,687 - B158DRAFT_1573 0.40 -2.6 1,632,710 - B158DRAFT_1573 0.41 -1.1 1,632,748 - B158DRAFT_1573 0.43 -0.7 1,632,844 + B158DRAFT_1573 0.49 -2.1 1,632,933 + B158DRAFT_1573 0.54 +2.4 1,632,968 + B158DRAFT_1573 0.57 -1.4 1,632,971 - B158DRAFT_1573 0.57 -0.4 1,632,976 - B158DRAFT_1573 0.57 +1.1 1,632,976 - B158DRAFT_1573 0.57 -0.9 1,633,036 - B158DRAFT_1573 0.61 +1.6 1,633,036 - B158DRAFT_1573 0.61 -0.7 1,633,038 + B158DRAFT_1573 0.61 +1.5 1,633,038 + B158DRAFT_1573 0.61 -0.6 1,633,038 + B158DRAFT_1573 0.61 -0.7 1,633,038 - B158DRAFT_1573 0.61 -1.6 1,633,038 - B158DRAFT_1573 0.61 +0.8 1,633,038 - B158DRAFT_1573 0.61 -1.0 1,633,096 + B158DRAFT_1573 0.64 +1.0 1,633,096 + B158DRAFT_1573 0.64 -0.2 1,633,096 + B158DRAFT_1573 0.64 -0.6 1,633,096 - B158DRAFT_1573 0.64 +0.8 1,633,164 + B158DRAFT_1573 0.68 -2.6 1,633,214 + B158DRAFT_1573 0.71 -0.8 1,633,247 + B158DRAFT_1573 0.73 -1.4 1,633,276 - B158DRAFT_1573 0.75 -1.8 1,633,432 - B158DRAFT_1573 0.85 +1.0 1,633,569 - +0.1 1,633,799 - -1.9 1,633,827 - -1.7 1,633,832 - -0.7 1,633,838 - -0.2 1,634,008 - B158DRAFT_1574 0.24 -2.0 1,634,074 - B158DRAFT_1574 0.30 -0.6 1,634,100 + B158DRAFT_1574 0.32 -0.1 1,634,100 + B158DRAFT_1574 0.32 +1.0 1,634,100 + B158DRAFT_1574 0.32 +0.5 1,634,108 - B158DRAFT_1574 0.32 +0.7 1,634,108 - B158DRAFT_1574 0.32 +0.4 1,634,156 - B158DRAFT_1574 0.37 -0.7 1,634,170 + B158DRAFT_1574 0.38 +0.2 1,634,170 + B158DRAFT_1574 0.38 -0.1 1,634,170 + B158DRAFT_1574 0.38 +0.0 1,634,178 - B158DRAFT_1574 0.39 -0.0 1,634,178 - B158DRAFT_1574 0.39 +0.1 1,634,178 - B158DRAFT_1574 0.39 -1.6 1,634,225 + B158DRAFT_1574 0.43 +0.2 1,634,234 + B158DRAFT_1574 0.43 -1.0 1,634,276 - B158DRAFT_1574 0.47 +0.1 1,634,391 + B158DRAFT_1574 0.57 -0.4 1,634,399 - B158DRAFT_1574 0.58 -0.1 1,634,562 - B158DRAFT_1574 0.72 -0.7 1,634,632 - B158DRAFT_1574 0.78 -0.9
Or see this region's nucleotide sequence