Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1337

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1336 and B158DRAFT_1337 are separated by 141 nucleotidesB158DRAFT_1337 and B158DRAFT_1338 are separated by 35 nucleotides B158DRAFT_1336: B158DRAFT_1336 - 5'-nucleotidase, at 1,376,892 to 1,377,803 _1336 B158DRAFT_1337: B158DRAFT_1337 - Imidazolonepropionase and related amidohydrolases, at 1,377,945 to 1,379,492 _1337 B158DRAFT_1338: B158DRAFT_1338 - TIGR01777 family protein, at 1,379,528 to 1,380,424 _1338 Position (kb) 1377 1378 1379 1380Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 1376.995 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.201 kb on + strand, within B158DRAFT_1336at 1377.201 kb on + strand, within B158DRAFT_1336at 1377.201 kb on + strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.228 kb on - strand, within B158DRAFT_1336at 1377.274 kb on + strand, within B158DRAFT_1336at 1377.403 kb on + strand, within B158DRAFT_1336at 1377.424 kb on + strand, within B158DRAFT_1336at 1377.432 kb on - strand, within B158DRAFT_1336at 1377.432 kb on - strand, within B158DRAFT_1336at 1377.449 kb on + strand, within B158DRAFT_1336at 1377.465 kb on + strand, within B158DRAFT_1336at 1377.467 kb on - strand, within B158DRAFT_1336at 1377.473 kb on - strand, within B158DRAFT_1336at 1377.474 kb on + strand, within B158DRAFT_1336at 1377.474 kb on + strand, within B158DRAFT_1336at 1377.482 kb on - strand, within B158DRAFT_1336at 1377.625 kb on + strand, within B158DRAFT_1336at 1377.630 kb on - strand, within B158DRAFT_1336at 1377.645 kb on + strand, within B158DRAFT_1336at 1377.668 kb on - strand, within B158DRAFT_1336at 1377.688 kb on + strand, within B158DRAFT_1336at 1377.694 kb on + strand, within B158DRAFT_1336at 1377.732 kb on - strandat 1377.734 kb on - strandat 1377.823 kb on + strandat 1377.823 kb on + strandat 1377.824 kb on - strandat 1377.831 kb on - strandat 1377.831 kb on - strandat 1377.871 kb on + strandat 1378.048 kb on + strandat 1378.048 kb on + strandat 1378.048 kb on + strandat 1378.056 kb on - strandat 1378.056 kb on - strandat 1378.056 kb on - strandat 1378.083 kb on + strandat 1378.087 kb on + strandat 1378.092 kb on + strandat 1378.100 kb on - strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.282 kb on + strand, within B158DRAFT_1337at 1378.325 kb on + strand, within B158DRAFT_1337at 1378.326 kb on + strand, within B158DRAFT_1337at 1378.333 kb on + strand, within B158DRAFT_1337at 1378.368 kb on + strand, within B158DRAFT_1337at 1378.389 kb on - strand, within B158DRAFT_1337at 1378.404 kb on - strand, within B158DRAFT_1337at 1378.449 kb on - strand, within B158DRAFT_1337at 1378.499 kb on - strand, within B158DRAFT_1337at 1378.499 kb on - strand, within B158DRAFT_1337at 1378.508 kb on - strand, within B158DRAFT_1337at 1378.510 kb on - strand, within B158DRAFT_1337at 1378.526 kb on - strand, within B158DRAFT_1337at 1378.561 kb on - strand, within B158DRAFT_1337at 1378.565 kb on + strand, within B158DRAFT_1337at 1378.576 kb on + strand, within B158DRAFT_1337at 1378.635 kb on - strand, within B158DRAFT_1337at 1378.652 kb on + strand, within B158DRAFT_1337at 1378.671 kb on + strand, within B158DRAFT_1337at 1378.686 kb on - strand, within B158DRAFT_1337at 1378.710 kb on + strand, within B158DRAFT_1337at 1378.785 kb on + strand, within B158DRAFT_1337at 1378.803 kb on - strand, within B158DRAFT_1337at 1379.049 kb on - strand, within B158DRAFT_1337at 1379.059 kb on - strand, within B158DRAFT_1337at 1379.059 kb on - strand, within B158DRAFT_1337at 1379.102 kb on + strand, within B158DRAFT_1337at 1379.149 kb on + strand, within B158DRAFT_1337at 1379.200 kb on + strand, within B158DRAFT_1337at 1379.208 kb on - strand, within B158DRAFT_1337at 1379.218 kb on - strand, within B158DRAFT_1337at 1379.334 kb on + strand, within B158DRAFT_1337at 1379.342 kb on - strandat 1379.342 kb on - strandat 1379.344 kb on + strandat 1379.349 kb on + strandat 1379.349 kb on + strandat 1379.349 kb on + strandat 1379.349 kb on + strandat 1379.351 kb on + strandat 1379.357 kb on - strandat 1379.357 kb on - strandat 1379.357 kb on - strandat 1379.395 kb on + strandat 1379.433 kb on - strandat 1379.436 kb on + strandat 1379.460 kb on - strandat 1379.506 kb on + strandat 1379.519 kb on - strandat 1379.544 kb on + strandat 1379.562 kb on - strandat 1379.580 kb on + strandat 1379.590 kb on + strandat 1379.658 kb on - strand, within B158DRAFT_1338at 1379.669 kb on + strand, within B158DRAFT_1338at 1379.669 kb on + strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.704 kb on - strand, within B158DRAFT_1338at 1379.704 kb on - strand, within B158DRAFT_1338at 1379.778 kb on + strand, within B158DRAFT_1338at 1379.778 kb on + strand, within B158DRAFT_1338at 1379.786 kb on - strand, within B158DRAFT_1338at 1379.786 kb on - strand, within B158DRAFT_1338at 1379.803 kb on - strand, within B158DRAFT_1338at 1379.853 kb on - strand, within B158DRAFT_1338at 1379.893 kb on - strand, within B158DRAFT_1338at 1379.919 kb on + strand, within B158DRAFT_1338at 1379.919 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.931 kb on - strand, within B158DRAFT_1338at 1379.931 kb on - strand, within B158DRAFT_1338at 1379.958 kb on + strand, within B158DRAFT_1338at 1379.964 kb on - strand, within B158DRAFT_1338at 1380.029 kb on + strand, within B158DRAFT_1338at 1380.104 kb on + strand, within B158DRAFT_1338at 1380.104 kb on + strand, within B158DRAFT_1338at 1380.104 kb on + strand, within B158DRAFT_1338at 1380.112 kb on - strand, within B158DRAFT_1338at 1380.112 kb on - strand, within B158DRAFT_1338at 1380.112 kb on - strand, within B158DRAFT_1338at 1380.145 kb on + strand, within B158DRAFT_1338at 1380.160 kb on - strand, within B158DRAFT_1338at 1380.165 kb on - strand, within B158DRAFT_1338at 1380.193 kb on + strand, within B158DRAFT_1338at 1380.198 kb on + strand, within B158DRAFT_1338at 1380.198 kb on + strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.217 kb on + strand, within B158DRAFT_1338at 1380.287 kb on - strand, within B158DRAFT_1338at 1380.322 kb on + strand, within B158DRAFT_1338at 1380.324 kb on + strand, within B158DRAFT_1338at 1380.458 kb on - strandat 1380.474 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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1,376,995 + B158DRAFT_1336 0.11 -0.6
1,377,032 + B158DRAFT_1336 0.15 -0.1
1,377,032 + B158DRAFT_1336 0.15 -0.5
1,377,032 + B158DRAFT_1336 0.15 -0.3
1,377,032 + B158DRAFT_1336 0.15 +0.3
1,377,032 + B158DRAFT_1336 0.15 -1.0
1,377,032 + B158DRAFT_1336 0.15 +0.3
1,377,032 + B158DRAFT_1336 0.15 -0.9
1,377,032 + B158DRAFT_1336 0.15 -0.5
1,377,032 + B158DRAFT_1336 0.15 +1.2
1,377,032 - B158DRAFT_1336 0.15 +1.5
1,377,040 - B158DRAFT_1336 0.16 -1.7
1,377,040 - B158DRAFT_1336 0.16 -0.7
1,377,040 - B158DRAFT_1336 0.16 -1.9
1,377,040 - B158DRAFT_1336 0.16 +0.3
1,377,040 - B158DRAFT_1336 0.16 +0.3
1,377,040 - B158DRAFT_1336 0.16 -1.6
1,377,040 - B158DRAFT_1336 0.16 -1.6
1,377,201 + B158DRAFT_1336 0.34 +0.5
1,377,201 + B158DRAFT_1336 0.34 +0.4
1,377,201 + B158DRAFT_1336 0.34 +0.1
1,377,209 - B158DRAFT_1336 0.35 -0.1
1,377,209 - B158DRAFT_1336 0.35 -1.7
1,377,209 - B158DRAFT_1336 0.35 +0.4
1,377,209 - B158DRAFT_1336 0.35 -0.8
1,377,209 - B158DRAFT_1336 0.35 -0.5
1,377,228 - B158DRAFT_1336 0.37 -0.1
1,377,274 + B158DRAFT_1336 0.42 -1.9
1,377,403 + B158DRAFT_1336 0.56 -0.2
1,377,424 + B158DRAFT_1336 0.58 +0.0
1,377,432 - B158DRAFT_1336 0.59 +0.6
1,377,432 - B158DRAFT_1336 0.59 -1.0
1,377,449 + B158DRAFT_1336 0.61 +0.3
1,377,465 + B158DRAFT_1336 0.63 +2.1
1,377,467 - B158DRAFT_1336 0.63 -1.5
1,377,473 - B158DRAFT_1336 0.64 +3.4
1,377,474 + B158DRAFT_1336 0.64 -0.6
1,377,474 + B158DRAFT_1336 0.64 -0.2
1,377,482 - B158DRAFT_1336 0.65 +2.5
1,377,625 + B158DRAFT_1336 0.80 -0.9
1,377,630 - B158DRAFT_1336 0.81 -2.1
1,377,645 + B158DRAFT_1336 0.83 -0.5
1,377,668 - B158DRAFT_1336 0.85 -0.4
1,377,688 + B158DRAFT_1336 0.87 -0.7
1,377,694 + B158DRAFT_1336 0.88 +1.4
1,377,732 - -0.6
1,377,734 - +1.0
1,377,823 + -1.2
1,377,823 + -0.5
1,377,824 - -1.0
1,377,831 - +1.4
1,377,831 - -1.7
1,377,871 + +0.6
1,378,048 + -0.7
1,378,048 + -0.4
1,378,048 + +0.0
1,378,056 - -1.0
1,378,056 - -1.7
1,378,056 - -0.8
1,378,083 + -1.2
1,378,087 + -1.2
1,378,092 + -1.1
1,378,100 - B158DRAFT_1337 0.10 -0.4
1,378,190 + B158DRAFT_1337 0.16 -1.5
1,378,190 + B158DRAFT_1337 0.16 +0.2
1,378,190 + B158DRAFT_1337 0.16 +0.3
1,378,190 + B158DRAFT_1337 0.16 -0.4
1,378,190 + B158DRAFT_1337 0.16 +1.0
1,378,190 + B158DRAFT_1337 0.16 +1.7
1,378,190 + B158DRAFT_1337 0.16 -1.4
1,378,198 - B158DRAFT_1337 0.16 -3.1
1,378,198 - B158DRAFT_1337 0.16 +2.6
1,378,198 - B158DRAFT_1337 0.16 +1.3
1,378,198 - B158DRAFT_1337 0.16 -0.6
1,378,198 - B158DRAFT_1337 0.16 +1.7
1,378,198 - B158DRAFT_1337 0.16 +1.0
1,378,198 - B158DRAFT_1337 0.16 -0.2
1,378,198 - B158DRAFT_1337 0.16 -1.1
1,378,198 - B158DRAFT_1337 0.16 +1.3
1,378,198 - B158DRAFT_1337 0.16 -0.3
1,378,198 - B158DRAFT_1337 0.16 -1.0
1,378,198 - B158DRAFT_1337 0.16 +0.9
1,378,198 - B158DRAFT_1337 0.16 -1.3
1,378,198 - B158DRAFT_1337 0.16 -0.5
1,378,198 - B158DRAFT_1337 0.16 +2.3
1,378,198 - B158DRAFT_1337 0.16 +0.7
1,378,282 + B158DRAFT_1337 0.22 -0.4
1,378,325 + B158DRAFT_1337 0.25 +0.1
1,378,326 + B158DRAFT_1337 0.25 +0.4
1,378,333 + B158DRAFT_1337 0.25 -2.1
1,378,368 + B158DRAFT_1337 0.27 +0.2
1,378,389 - B158DRAFT_1337 0.29 -1.3
1,378,404 - B158DRAFT_1337 0.30 -1.1
1,378,449 - B158DRAFT_1337 0.33 -3.3
1,378,499 - B158DRAFT_1337 0.36 -0.2
1,378,499 - B158DRAFT_1337 0.36 -2.0
1,378,508 - B158DRAFT_1337 0.36 +1.3
1,378,510 - B158DRAFT_1337 0.36 -1.1
1,378,526 - B158DRAFT_1337 0.38 +0.1
1,378,561 - B158DRAFT_1337 0.40 +0.0
1,378,565 + B158DRAFT_1337 0.40 +0.2
1,378,576 + B158DRAFT_1337 0.41 -1.0
1,378,635 - B158DRAFT_1337 0.45 +0.8
1,378,652 + B158DRAFT_1337 0.46 -1.2
1,378,671 + B158DRAFT_1337 0.47 -1.5
1,378,686 - B158DRAFT_1337 0.48 +1.7
1,378,710 + B158DRAFT_1337 0.49 -0.7
1,378,785 + B158DRAFT_1337 0.54 -1.3
1,378,803 - B158DRAFT_1337 0.55 +0.1
1,379,049 - B158DRAFT_1337 0.71 -0.9
1,379,059 - B158DRAFT_1337 0.72 +0.1
1,379,059 - B158DRAFT_1337 0.72 -1.4
1,379,102 + B158DRAFT_1337 0.75 -0.1
1,379,149 + B158DRAFT_1337 0.78 -1.0
1,379,200 + B158DRAFT_1337 0.81 -0.6
1,379,208 - B158DRAFT_1337 0.82 -0.6
1,379,218 - B158DRAFT_1337 0.82 -1.2
1,379,334 + B158DRAFT_1337 0.90 +1.0
1,379,342 - +0.5
1,379,342 - +3.5
1,379,344 + +0.1
1,379,349 + +0.2
1,379,349 + +2.9
1,379,349 + -1.3
1,379,349 + +1.5
1,379,351 + +1.6
1,379,357 - -2.0
1,379,357 - -0.8
1,379,357 - +0.2
1,379,395 + -0.1
1,379,433 - +0.6
1,379,436 + -0.8
1,379,460 - -0.1
1,379,506 + +0.2
1,379,519 - -0.8
1,379,544 + -0.2
1,379,562 - -1.2
1,379,580 + -2.3
1,379,590 + +0.4
1,379,658 - B158DRAFT_1338 0.14 +0.6
1,379,669 + B158DRAFT_1338 0.16 -0.4
1,379,669 + B158DRAFT_1338 0.16 +0.7
1,379,677 - B158DRAFT_1338 0.17 -1.6
1,379,677 - B158DRAFT_1338 0.17 -0.8
1,379,677 - B158DRAFT_1338 0.17 +0.1
1,379,677 - B158DRAFT_1338 0.17 +1.0
1,379,677 - B158DRAFT_1338 0.17 -0.2
1,379,696 + B158DRAFT_1338 0.19 -0.5
1,379,696 + B158DRAFT_1338 0.19 -0.1
1,379,696 + B158DRAFT_1338 0.19 +0.3
1,379,696 + B158DRAFT_1338 0.19 -0.3
1,379,704 - B158DRAFT_1338 0.20 +1.2
1,379,704 - B158DRAFT_1338 0.20 +1.2
1,379,778 + B158DRAFT_1338 0.28 +2.6
1,379,778 + B158DRAFT_1338 0.28 +0.2
1,379,786 - B158DRAFT_1338 0.29 -0.6
1,379,786 - B158DRAFT_1338 0.29 +1.2
1,379,803 - B158DRAFT_1338 0.31 +0.3
1,379,853 - B158DRAFT_1338 0.36 +1.4
1,379,893 - B158DRAFT_1338 0.41 -0.1
1,379,919 + B158DRAFT_1338 0.44 +0.3
1,379,919 + B158DRAFT_1338 0.44 -0.4
1,379,923 + B158DRAFT_1338 0.44 -0.7
1,379,923 + B158DRAFT_1338 0.44 -1.6
1,379,923 + B158DRAFT_1338 0.44 +0.2
1,379,923 + B158DRAFT_1338 0.44 -0.2
1,379,931 - B158DRAFT_1338 0.45 -0.4
1,379,931 - B158DRAFT_1338 0.45 -0.6
1,379,958 + B158DRAFT_1338 0.48 -0.4
1,379,964 - B158DRAFT_1338 0.49 -0.3
1,380,029 + B158DRAFT_1338 0.56 -1.4
1,380,104 + B158DRAFT_1338 0.64 +0.2
1,380,104 + B158DRAFT_1338 0.64 -0.5
1,380,104 + B158DRAFT_1338 0.64 -1.2
1,380,112 - B158DRAFT_1338 0.65 +1.3
1,380,112 - B158DRAFT_1338 0.65 -0.5
1,380,112 - B158DRAFT_1338 0.65 -0.7
1,380,145 + B158DRAFT_1338 0.69 -0.2
1,380,160 - B158DRAFT_1338 0.70 -0.5
1,380,165 - B158DRAFT_1338 0.71 -0.9
1,380,193 + B158DRAFT_1338 0.74 -1.2
1,380,198 + B158DRAFT_1338 0.75 +0.8
1,380,198 + B158DRAFT_1338 0.75 +0.2
1,380,206 - B158DRAFT_1338 0.76 -0.4
1,380,206 - B158DRAFT_1338 0.76 +4.5
1,380,206 - B158DRAFT_1338 0.76 -1.3
1,380,206 - B158DRAFT_1338 0.76 -0.2
1,380,217 + B158DRAFT_1338 0.77 -0.7
1,380,287 - B158DRAFT_1338 0.85 -0.4
1,380,322 + B158DRAFT_1338 0.89 -1.1
1,380,324 + B158DRAFT_1338 0.89 -2.2
1,380,458 - +1.7
1,380,474 - +5.0

Or see this region's nucleotide sequence