Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1198 and B158DRAFT_1199 are separated by 56 nucleotides B158DRAFT_1199 and B158DRAFT_1200 are separated by 99 nucleotides
B158DRAFT_1198: B158DRAFT_1198 - ABC-type multidrug transport system, permease component, at 1,236,865 to 1,238,166
_1198
B158DRAFT_1199: B158DRAFT_1199 - Uncharacterized protein conserved in bacteria, at 1,238,223 to 1,238,450
_1199
B158DRAFT_1200: B158DRAFT_1200 - fumarase, class II (EC 4.2.1.2), at 1,238,550 to 1,239,911
_1200
Position (kb)
1238
1239 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1237.240 kb on - strand, within B158DRAFT_1198 at 1237.384 kb on - strand, within B158DRAFT_1198 at 1237.395 kb on + strand, within B158DRAFT_1198 at 1237.489 kb on - strand, within B158DRAFT_1198 at 1237.489 kb on - strand, within B158DRAFT_1198 at 1237.572 kb on + strand, within B158DRAFT_1198 at 1237.638 kb on - strand, within B158DRAFT_1198 at 1237.711 kb on + strand, within B158DRAFT_1198 at 1237.732 kb on + strand, within B158DRAFT_1198 at 1237.732 kb on + strand, within B158DRAFT_1198 at 1237.740 kb on - strand, within B158DRAFT_1198 at 1237.757 kb on + strand, within B158DRAFT_1198 at 1237.776 kb on - strand, within B158DRAFT_1198 at 1237.878 kb on - strand, within B158DRAFT_1198 at 1238.017 kb on + strand, within B158DRAFT_1198 at 1238.070 kb on - strand at 1238.262 kb on + strand, within B158DRAFT_1199 at 1238.591 kb on + strand at 1238.791 kb on - strand, within B158DRAFT_1200 at 1238.860 kb on + strand, within B158DRAFT_1200 at 1238.940 kb on + strand, within B158DRAFT_1200 at 1239.015 kb on - strand, within B158DRAFT_1200 at 1239.082 kb on - strand, within B158DRAFT_1200 at 1239.142 kb on + strand, within B158DRAFT_1200 at 1239.212 kb on + strand, within B158DRAFT_1200 at 1239.302 kb on - strand, within B158DRAFT_1200 at 1239.334 kb on + strand, within B158DRAFT_1200 at 1239.352 kb on + strand, within B158DRAFT_1200 at 1239.369 kb on + strand, within B158DRAFT_1200 at 1239.371 kb on + strand, within B158DRAFT_1200 at 1239.432 kb on + strand, within B158DRAFT_1200
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 1,237,240 - B158DRAFT_1198 0.29 -0.6 1,237,384 - B158DRAFT_1198 0.40 -0.7 1,237,395 + B158DRAFT_1198 0.41 -0.5 1,237,489 - B158DRAFT_1198 0.48 +0.4 1,237,489 - B158DRAFT_1198 0.48 +0.6 1,237,572 + B158DRAFT_1198 0.54 -0.9 1,237,638 - B158DRAFT_1198 0.59 -0.9 1,237,711 + B158DRAFT_1198 0.65 -1.6 1,237,732 + B158DRAFT_1198 0.67 -0.3 1,237,732 + B158DRAFT_1198 0.67 -0.6 1,237,740 - B158DRAFT_1198 0.67 +0.2 1,237,757 + B158DRAFT_1198 0.69 -1.2 1,237,776 - B158DRAFT_1198 0.70 -1.8 1,237,878 - B158DRAFT_1198 0.78 +1.5 1,238,017 + B158DRAFT_1198 0.88 -2.3 1,238,070 - +0.5 1,238,262 + B158DRAFT_1199 0.17 -0.2 1,238,591 + +1.9 1,238,791 - B158DRAFT_1200 0.18 -0.3 1,238,860 + B158DRAFT_1200 0.23 +0.8 1,238,940 + B158DRAFT_1200 0.29 -1.3 1,239,015 - B158DRAFT_1200 0.34 -0.9 1,239,082 - B158DRAFT_1200 0.39 -0.2 1,239,142 + B158DRAFT_1200 0.43 +0.3 1,239,212 + B158DRAFT_1200 0.49 -0.8 1,239,302 - B158DRAFT_1200 0.55 -0.8 1,239,334 + B158DRAFT_1200 0.58 +3.1 1,239,352 + B158DRAFT_1200 0.59 -0.9 1,239,369 + B158DRAFT_1200 0.60 -0.4 1,239,371 + B158DRAFT_1200 0.60 +1.2 1,239,432 + B158DRAFT_1200 0.65 -1.2
Or see this region's nucleotide sequence