Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1184

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1182 and B158DRAFT_1183 are separated by 68 nucleotidesB158DRAFT_1183 and B158DRAFT_1184 are separated by 48 nucleotidesB158DRAFT_1184 and B158DRAFT_1185 are separated by 7 nucleotidesB158DRAFT_1185 and B158DRAFT_1186 are separated by 56 nucleotides B158DRAFT_1182: B158DRAFT_1182 - TIGR03643 family protein, at 1,222,882 to 1,223,127 _1182 B158DRAFT_1183: B158DRAFT_1183 - hypothetical protein, at 1,223,196 to 1,223,933 _1183 B158DRAFT_1184: B158DRAFT_1184 - hypothetical protein, at 1,223,982 to 1,224,341 _1184 B158DRAFT_1185: B158DRAFT_1185 - hypothetical protein, at 1,224,349 to 1,224,759 _1185 B158DRAFT_1186: B158DRAFT_1186 - hypothetical protein, at 1,224,816 to 1,225,361 _1186 Position (kb) 1223 1224 1225Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 1222.997 kb on + strand, within B158DRAFT_1182at 1222.998 kb on + strand, within B158DRAFT_1182at 1222.999 kb on + strand, within B158DRAFT_1182at 1223.007 kb on - strand, within B158DRAFT_1182at 1223.007 kb on - strand, within B158DRAFT_1182at 1223.017 kb on - strand, within B158DRAFT_1182at 1223.042 kb on - strand, within B158DRAFT_1182at 1223.053 kb on + strand, within B158DRAFT_1182at 1223.053 kb on + strand, within B158DRAFT_1182at 1223.053 kb on + strand, within B158DRAFT_1182at 1223.152 kb on - strandat 1223.354 kb on + strand, within B158DRAFT_1183at 1223.362 kb on - strand, within B158DRAFT_1183at 1223.412 kb on - strand, within B158DRAFT_1183at 1223.414 kb on + strand, within B158DRAFT_1183at 1223.414 kb on + strand, within B158DRAFT_1183at 1223.465 kb on - strand, within B158DRAFT_1183at 1223.494 kb on + strand, within B158DRAFT_1183at 1223.561 kb on + strand, within B158DRAFT_1183at 1223.561 kb on + strand, within B158DRAFT_1183at 1223.561 kb on + strand, within B158DRAFT_1183at 1223.569 kb on - strand, within B158DRAFT_1183at 1223.569 kb on - strand, within B158DRAFT_1183at 1223.569 kb on - strand, within B158DRAFT_1183at 1223.611 kb on - strand, within B158DRAFT_1183at 1223.612 kb on + strand, within B158DRAFT_1183at 1223.675 kb on + strand, within B158DRAFT_1183at 1223.675 kb on + strand, within B158DRAFT_1183at 1223.675 kb on + strand, within B158DRAFT_1183at 1223.683 kb on - strand, within B158DRAFT_1183at 1223.683 kb on - strand, within B158DRAFT_1183at 1223.683 kb on - strand, within B158DRAFT_1183at 1223.683 kb on - strand, within B158DRAFT_1183at 1223.683 kb on - strand, within B158DRAFT_1183at 1223.698 kb on + strand, within B158DRAFT_1183at 1223.698 kb on - strand, within B158DRAFT_1183at 1223.698 kb on - strand, within B158DRAFT_1183at 1223.708 kb on + strand, within B158DRAFT_1183at 1223.708 kb on + strand, within B158DRAFT_1183at 1223.716 kb on - strand, within B158DRAFT_1183at 1223.746 kb on + strand, within B158DRAFT_1183at 1223.751 kb on + strand, within B158DRAFT_1183at 1223.754 kb on - strand, within B158DRAFT_1183at 1223.806 kb on - strand, within B158DRAFT_1183at 1223.817 kb on + strand, within B158DRAFT_1183at 1223.825 kb on + strand, within B158DRAFT_1183at 1223.836 kb on + strand, within B158DRAFT_1183at 1223.846 kb on + strand, within B158DRAFT_1183at 1223.858 kb on + strand, within B158DRAFT_1183at 1223.858 kb on + strand, within B158DRAFT_1183at 1223.858 kb on + strand, within B158DRAFT_1183at 1223.858 kb on + strand, within B158DRAFT_1183at 1223.866 kb on - strandat 1223.866 kb on - strandat 1223.923 kb on - strandat 1223.923 kb on - strandat 1224.058 kb on - strand, within B158DRAFT_1184at 1224.058 kb on - strand, within B158DRAFT_1184at 1224.188 kb on - strand, within B158DRAFT_1184at 1224.188 kb on - strand, within B158DRAFT_1184at 1224.195 kb on + strand, within B158DRAFT_1184at 1224.257 kb on + strand, within B158DRAFT_1184at 1224.257 kb on + strand, within B158DRAFT_1184at 1224.263 kb on - strand, within B158DRAFT_1184at 1224.265 kb on - strand, within B158DRAFT_1184at 1224.422 kb on - strand, within B158DRAFT_1185at 1224.484 kb on - strand, within B158DRAFT_1185at 1224.503 kb on - strand, within B158DRAFT_1185at 1224.571 kb on - strand, within B158DRAFT_1185at 1224.643 kb on - strand, within B158DRAFT_1185at 1224.683 kb on + strand, within B158DRAFT_1185at 1224.959 kb on + strand, within B158DRAFT_1186at 1224.976 kb on - strand, within B158DRAFT_1186at 1225.010 kb on - strand, within B158DRAFT_1186at 1225.046 kb on + strand, within B158DRAFT_1186at 1225.059 kb on - strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.066 kb on + strand, within B158DRAFT_1186at 1225.068 kb on + strand, within B158DRAFT_1186at 1225.074 kb on - strand, within B158DRAFT_1186at 1225.074 kb on - strand, within B158DRAFT_1186at 1225.074 kb on - strand, within B158DRAFT_1186at 1225.074 kb on - strand, within B158DRAFT_1186at 1225.074 kb on - strand, within B158DRAFT_1186at 1225.074 kb on - strand, within B158DRAFT_1186at 1225.076 kb on + strand, within B158DRAFT_1186at 1225.076 kb on - strand, within B158DRAFT_1186at 1225.076 kb on - strand, within B158DRAFT_1186at 1225.088 kb on - strand, within B158DRAFT_1186

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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1,222,997 + B158DRAFT_1182 0.47 -1.7
1,222,998 + B158DRAFT_1182 0.47 -0.3
1,222,999 + B158DRAFT_1182 0.48 +0.9
1,223,007 - B158DRAFT_1182 0.51 -1.6
1,223,007 - B158DRAFT_1182 0.51 -0.5
1,223,017 - B158DRAFT_1182 0.55 -0.9
1,223,042 - B158DRAFT_1182 0.65 +0.7
1,223,053 + B158DRAFT_1182 0.70 -1.1
1,223,053 + B158DRAFT_1182 0.70 -0.1
1,223,053 + B158DRAFT_1182 0.70 -0.3
1,223,152 - -0.9
1,223,354 + B158DRAFT_1183 0.21 +2.3
1,223,362 - B158DRAFT_1183 0.22 -1.1
1,223,412 - B158DRAFT_1183 0.29 +0.3
1,223,414 + B158DRAFT_1183 0.30 -0.0
1,223,414 + B158DRAFT_1183 0.30 -1.0
1,223,465 - B158DRAFT_1183 0.36 +0.1
1,223,494 + B158DRAFT_1183 0.40 -1.0
1,223,561 + B158DRAFT_1183 0.49 -0.1
1,223,561 + B158DRAFT_1183 0.49 +0.0
1,223,561 + B158DRAFT_1183 0.49 +1.4
1,223,569 - B158DRAFT_1183 0.51 -1.7
1,223,569 - B158DRAFT_1183 0.51 -1.4
1,223,569 - B158DRAFT_1183 0.51 -0.3
1,223,611 - B158DRAFT_1183 0.56 -0.3
1,223,612 + B158DRAFT_1183 0.56 -0.0
1,223,675 + B158DRAFT_1183 0.65 -2.0
1,223,675 + B158DRAFT_1183 0.65 -1.3
1,223,675 + B158DRAFT_1183 0.65 -0.2
1,223,683 - B158DRAFT_1183 0.66 -0.6
1,223,683 - B158DRAFT_1183 0.66 -0.6
1,223,683 - B158DRAFT_1183 0.66 +0.3
1,223,683 - B158DRAFT_1183 0.66 -0.0
1,223,683 - B158DRAFT_1183 0.66 -0.4
1,223,698 + B158DRAFT_1183 0.68 +0.3
1,223,698 - B158DRAFT_1183 0.68 -1.0
1,223,698 - B158DRAFT_1183 0.68 -0.3
1,223,708 + B158DRAFT_1183 0.69 -0.1
1,223,708 + B158DRAFT_1183 0.69 -0.4
1,223,716 - B158DRAFT_1183 0.70 -1.7
1,223,746 + B158DRAFT_1183 0.75 +0.7
1,223,751 + B158DRAFT_1183 0.75 -0.6
1,223,754 - B158DRAFT_1183 0.76 -0.9
1,223,806 - B158DRAFT_1183 0.83 +5.0
1,223,817 + B158DRAFT_1183 0.84 +1.3
1,223,825 + B158DRAFT_1183 0.85 +2.8
1,223,836 + B158DRAFT_1183 0.87 +0.4
1,223,846 + B158DRAFT_1183 0.88 -1.3
1,223,858 + B158DRAFT_1183 0.90 +0.2
1,223,858 + B158DRAFT_1183 0.90 -0.8
1,223,858 + B158DRAFT_1183 0.90 -2.0
1,223,858 + B158DRAFT_1183 0.90 -2.6
1,223,866 - +0.5
1,223,866 - -1.1
1,223,923 - -0.1
1,223,923 - -0.6
1,224,058 - B158DRAFT_1184 0.21 -0.3
1,224,058 - B158DRAFT_1184 0.21 -0.0
1,224,188 - B158DRAFT_1184 0.57 -0.3
1,224,188 - B158DRAFT_1184 0.57 +0.2
1,224,195 + B158DRAFT_1184 0.59 -0.7
1,224,257 + B158DRAFT_1184 0.76 +0.7
1,224,257 + B158DRAFT_1184 0.76 +1.1
1,224,263 - B158DRAFT_1184 0.78 +2.2
1,224,265 - B158DRAFT_1184 0.79 -1.5
1,224,422 - B158DRAFT_1185 0.18 +0.3
1,224,484 - B158DRAFT_1185 0.33 -0.6
1,224,503 - B158DRAFT_1185 0.37 -2.3
1,224,571 - B158DRAFT_1185 0.54 -0.0
1,224,643 - B158DRAFT_1185 0.72 +0.5
1,224,683 + B158DRAFT_1185 0.81 +0.8
1,224,959 + B158DRAFT_1186 0.26 -2.5
1,224,976 - B158DRAFT_1186 0.29 -1.3
1,225,010 - B158DRAFT_1186 0.36 -0.4
1,225,046 + B158DRAFT_1186 0.42 -0.5
1,225,059 - B158DRAFT_1186 0.45 -2.4
1,225,066 + B158DRAFT_1186 0.46 -0.1
1,225,066 + B158DRAFT_1186 0.46 -1.1
1,225,066 + B158DRAFT_1186 0.46 -1.2
1,225,066 + B158DRAFT_1186 0.46 +0.3
1,225,066 + B158DRAFT_1186 0.46 +1.3
1,225,066 + B158DRAFT_1186 0.46 -0.9
1,225,066 + B158DRAFT_1186 0.46 +1.1
1,225,066 + B158DRAFT_1186 0.46 -1.4
1,225,066 + B158DRAFT_1186 0.46 -1.6
1,225,066 + B158DRAFT_1186 0.46 -0.5
1,225,066 + B158DRAFT_1186 0.46 +0.7
1,225,066 + B158DRAFT_1186 0.46 -0.7
1,225,066 + B158DRAFT_1186 0.46 -1.3
1,225,066 + B158DRAFT_1186 0.46 +2.1
1,225,066 + B158DRAFT_1186 0.46 +0.0
1,225,066 + B158DRAFT_1186 0.46 -1.0
1,225,066 + B158DRAFT_1186 0.46 -1.7
1,225,068 + B158DRAFT_1186 0.46 -1.4
1,225,074 - B158DRAFT_1186 0.47 -0.7
1,225,074 - B158DRAFT_1186 0.47 +0.2
1,225,074 - B158DRAFT_1186 0.47 -0.7
1,225,074 - B158DRAFT_1186 0.47 +0.1
1,225,074 - B158DRAFT_1186 0.47 -1.4
1,225,074 - B158DRAFT_1186 0.47 -1.3
1,225,076 + B158DRAFT_1186 0.48 +0.1
1,225,076 - B158DRAFT_1186 0.48 -0.8
1,225,076 - B158DRAFT_1186 0.48 -0.4
1,225,088 - B158DRAFT_1186 0.50 -1.4

Or see this region's nucleotide sequence