Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0977 and B158DRAFT_0978 are separated by 149 nucleotides B158DRAFT_0978 and B158DRAFT_0979 are separated by 27 nucleotides
B158DRAFT_0977: B158DRAFT_0977 - Predicted phosphohydrolases, at 1,007,173 to 1,007,997
_0977
B158DRAFT_0978: B158DRAFT_0978 - DNA topoisomerase IV, B subunit, proteobacterial, at 1,008,147 to 1,010,036
_0978
B158DRAFT_0979: B158DRAFT_0979 - DNA topoisomerase IV, A subunit, proteobacterial, at 1,010,064 to 1,012,304
_0979
Position (kb)
1008
1009
1010
1011 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1007.178 kb on - strand at 1007.184 kb on - strand at 1007.231 kb on + strand at 1007.231 kb on + strand at 1007.239 kb on - strand at 1007.270 kb on - strand, within B158DRAFT_0977 at 1007.373 kb on + strand, within B158DRAFT_0977 at 1007.376 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.381 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.424 kb on - strand, within B158DRAFT_0977 at 1007.462 kb on - strand, within B158DRAFT_0977 at 1007.478 kb on - strand, within B158DRAFT_0977 at 1007.563 kb on - strand, within B158DRAFT_0977 at 1007.567 kb on + strand, within B158DRAFT_0977 at 1007.567 kb on + strand, within B158DRAFT_0977 at 1007.572 kb on + strand, within B158DRAFT_0977 at 1007.604 kb on - strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.630 kb on + strand, within B158DRAFT_0977 at 1007.754 kb on + strand, within B158DRAFT_0977 at 1007.754 kb on + strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.888 kb on + strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.915 kb on + strand at 1007.915 kb on + strand at 1007.923 kb on - strand at 1008.017 kb on - strand at 1008.024 kb on + strand at 1008.027 kb on - strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.037 kb on - strand at 1008.037 kb on - strand at 1008.037 kb on - strand at 1008.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 1,007,178 - +1.0 1,007,184 - -0.6 1,007,231 + -0.7 1,007,231 + -0.1 1,007,239 - -1.9 1,007,270 - B158DRAFT_0977 0.12 -0.1 1,007,373 + B158DRAFT_0977 0.24 -2.0 1,007,376 + B158DRAFT_0977 0.25 +1.0 1,007,378 + B158DRAFT_0977 0.25 -0.9 1,007,378 + B158DRAFT_0977 0.25 +0.3 1,007,378 + B158DRAFT_0977 0.25 -0.6 1,007,378 + B158DRAFT_0977 0.25 +0.0 1,007,378 + B158DRAFT_0977 0.25 -1.6 1,007,381 - B158DRAFT_0977 0.25 -1.3 1,007,386 - B158DRAFT_0977 0.26 -0.1 1,007,386 - B158DRAFT_0977 0.26 -1.4 1,007,386 - B158DRAFT_0977 0.26 -0.2 1,007,386 - B158DRAFT_0977 0.26 -2.4 1,007,386 - B158DRAFT_0977 0.26 -1.2 1,007,386 - B158DRAFT_0977 0.26 +0.4 1,007,386 - B158DRAFT_0977 0.26 -1.0 1,007,386 - B158DRAFT_0977 0.26 -0.5 1,007,386 - B158DRAFT_0977 0.26 -0.1 1,007,386 - B158DRAFT_0977 0.26 -2.2 1,007,386 - B158DRAFT_0977 0.26 -3.1 1,007,424 - B158DRAFT_0977 0.30 +0.7 1,007,462 - B158DRAFT_0977 0.35 -1.3 1,007,478 - B158DRAFT_0977 0.37 -0.8 1,007,563 - B158DRAFT_0977 0.47 -1.1 1,007,567 + B158DRAFT_0977 0.48 -1.4 1,007,567 + B158DRAFT_0977 0.48 +0.3 1,007,572 + B158DRAFT_0977 0.48 +0.7 1,007,604 - B158DRAFT_0977 0.52 -1.0 1,007,606 + B158DRAFT_0977 0.52 -0.9 1,007,606 + B158DRAFT_0977 0.52 -2.4 1,007,606 + B158DRAFT_0977 0.52 -0.1 1,007,614 - B158DRAFT_0977 0.53 +0.6 1,007,614 - B158DRAFT_0977 0.53 +4.2 1,007,614 - B158DRAFT_0977 0.53 -0.8 1,007,614 - B158DRAFT_0977 0.53 -1.1 1,007,630 + B158DRAFT_0977 0.55 -0.0 1,007,754 + B158DRAFT_0977 0.70 -1.4 1,007,754 + B158DRAFT_0977 0.70 +3.9 1,007,762 - B158DRAFT_0977 0.71 -2.8 1,007,762 - B158DRAFT_0977 0.71 -0.4 1,007,762 - B158DRAFT_0977 0.71 -0.9 1,007,888 + B158DRAFT_0977 0.87 -1.4 1,007,896 - B158DRAFT_0977 0.88 -0.2 1,007,896 - B158DRAFT_0977 0.88 -1.0 1,007,896 - B158DRAFT_0977 0.88 -0.6 1,007,915 + -1.4 1,007,915 + +0.2 1,007,923 - -1.3 1,008,017 - -0.8 1,008,024 + -0.5 1,008,027 - -0.6 1,008,029 + -1.0 1,008,029 + +0.5 1,008,029 + +1.3 1,008,029 + -0.0 1,008,029 + -0.0 1,008,037 - +0.4 1,008,037 - -0.0 1,008,037 - +0.5 1,008,037 - +1.3
Or see this region's nucleotide sequence