Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0836 and B158DRAFT_0837 overlap by 1 nucleotides B158DRAFT_0837 and B158DRAFT_0838 overlap by 11 nucleotides
B158DRAFT_0836: B158DRAFT_0836 - Type II secretory pathway, component ExeA (predicted ATPase), at 846,046 to 847,779
_0836
B158DRAFT_0837: B158DRAFT_0837 - hypothetical protein, at 847,779 to 848,597
_0837
B158DRAFT_0838: B158DRAFT_0838 - Predicted Zn-dependent peptidases, at 848,587 to 851,451
_0838
Position (kb) 847
848
849 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 846.782 kb on - strand, within B158DRAFT_0836 at 846.811 kb on - strand, within B158DRAFT_0836 at 846.811 kb on - strand, within B158DRAFT_0836 at 846.822 kb on + strand, within B158DRAFT_0836 at 846.912 kb on - strand, within B158DRAFT_0836 at 846.929 kb on + strand, within B158DRAFT_0836 at 846.937 kb on - strand, within B158DRAFT_0836 at 847.005 kb on - strand, within B158DRAFT_0836 at 847.026 kb on + strand, within B158DRAFT_0836 at 847.026 kb on + strand, within B158DRAFT_0836 at 847.026 kb on + strand, within B158DRAFT_0836 at 847.034 kb on - strand, within B158DRAFT_0836 at 847.055 kb on + strand, within B158DRAFT_0836 at 847.062 kb on + strand, within B158DRAFT_0836 at 847.179 kb on - strand, within B158DRAFT_0836 at 847.302 kb on + strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.388 kb on - strand, within B158DRAFT_0836 at 847.483 kb on + strand, within B158DRAFT_0836 at 847.491 kb on - strand, within B158DRAFT_0836 at 847.491 kb on - strand, within B158DRAFT_0836 at 847.865 kb on - strand, within B158DRAFT_0837 at 848.000 kb on - strand, within B158DRAFT_0837 at 848.084 kb on + strand, within B158DRAFT_0837 at 848.220 kb on - strand, within B158DRAFT_0837 at 848.318 kb on - strand, within B158DRAFT_0837 at 848.330 kb on - strand, within B158DRAFT_0837 at 848.404 kb on + strand, within B158DRAFT_0837 at 848.411 kb on - strand, within B158DRAFT_0837 at 848.416 kb on - strand, within B158DRAFT_0837 at 848.479 kb on + strand, within B158DRAFT_0837 at 848.479 kb on + strand, within B158DRAFT_0837 at 848.487 kb on - strand, within B158DRAFT_0837 at 848.568 kb on + strand at 848.574 kb on + strand at 848.804 kb on + strand at 848.804 kb on + strand at 848.804 kb on + strand at 848.829 kb on - strand at 848.855 kb on + strand at 848.864 kb on - strand at 849.093 kb on + strand, within B158DRAFT_0838 at 849.101 kb on - strand, within B158DRAFT_0838 at 849.101 kb on - strand, within B158DRAFT_0838 at 849.101 kb on - strand, within B158DRAFT_0838 at 849.155 kb on + strand, within B158DRAFT_0838 at 849.220 kb on - strand, within B158DRAFT_0838 at 849.400 kb on + strand, within B158DRAFT_0838 at 849.418 kb on - strand, within B158DRAFT_0838 at 849.464 kb on + strand, within B158DRAFT_0838 at 849.464 kb on + strand, within B158DRAFT_0838 at 849.469 kb on + strand, within B158DRAFT_0838 at 849.469 kb on + strand, within B158DRAFT_0838 at 849.469 kb on + strand, within B158DRAFT_0838 at 849.474 kb on + strand, within B158DRAFT_0838 at 849.507 kb on + strand, within B158DRAFT_0838
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 846,782 - B158DRAFT_0836 0.42 +0.4 846,811 - B158DRAFT_0836 0.44 -1.9 846,811 - B158DRAFT_0836 0.44 -1.4 846,822 + B158DRAFT_0836 0.45 -1.0 846,912 - B158DRAFT_0836 0.50 -0.2 846,929 + B158DRAFT_0836 0.51 -0.8 846,937 - B158DRAFT_0836 0.51 +2.2 847,005 - B158DRAFT_0836 0.55 +0.3 847,026 + B158DRAFT_0836 0.57 -0.3 847,026 + B158DRAFT_0836 0.57 +0.0 847,026 + B158DRAFT_0836 0.57 -0.5 847,034 - B158DRAFT_0836 0.57 +1.1 847,055 + B158DRAFT_0836 0.58 +0.1 847,062 + B158DRAFT_0836 0.59 -0.2 847,179 - B158DRAFT_0836 0.65 -0.5 847,302 + B158DRAFT_0836 0.72 +1.1 847,388 - B158DRAFT_0836 0.77 -0.7 847,388 - B158DRAFT_0836 0.77 -0.6 847,388 - B158DRAFT_0836 0.77 +0.2 847,388 - B158DRAFT_0836 0.77 +0.3 847,483 + B158DRAFT_0836 0.83 -1.0 847,491 - B158DRAFT_0836 0.83 -1.6 847,491 - B158DRAFT_0836 0.83 +1.9 847,865 - B158DRAFT_0837 0.11 -0.6 848,000 - B158DRAFT_0837 0.27 -0.9 848,084 + B158DRAFT_0837 0.37 -1.3 848,220 - B158DRAFT_0837 0.54 -0.7 848,318 - B158DRAFT_0837 0.66 +7.4 848,330 - B158DRAFT_0837 0.67 -0.6 848,404 + B158DRAFT_0837 0.76 -1.2 848,411 - B158DRAFT_0837 0.77 -0.1 848,416 - B158DRAFT_0837 0.78 -0.8 848,479 + B158DRAFT_0837 0.85 +0.1 848,479 + B158DRAFT_0837 0.85 +4.2 848,487 - B158DRAFT_0837 0.86 -0.2 848,568 + -1.4 848,574 + -0.4 848,804 + -1.2 848,804 + -1.5 848,804 + +1.7 848,829 - -1.1 848,855 + -1.1 848,864 - +1.1 849,093 + B158DRAFT_0838 0.18 +0.1 849,101 - B158DRAFT_0838 0.18 +1.0 849,101 - B158DRAFT_0838 0.18 +1.2 849,101 - B158DRAFT_0838 0.18 -1.2 849,155 + B158DRAFT_0838 0.20 -0.0 849,220 - B158DRAFT_0838 0.22 +0.4 849,400 + B158DRAFT_0838 0.28 -1.4 849,418 - B158DRAFT_0838 0.29 -1.8 849,464 + B158DRAFT_0838 0.31 +0.4 849,464 + B158DRAFT_0838 0.31 -0.7 849,469 + B158DRAFT_0838 0.31 -0.0 849,469 + B158DRAFT_0838 0.31 -0.2 849,469 + B158DRAFT_0838 0.31 -2.9 849,474 + B158DRAFT_0838 0.31 +0.2 849,507 + B158DRAFT_0838 0.32 -0.6
Or see this region's nucleotide sequence